RNA–Protein interactions for RNA: ENST00000554805.6

SYNE2-213, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,481 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-213ENST00000554805 ACER2Q5QJU3 275 aa8.16□□□□□ -1.1
SYNE2-213ENST00000554805 Q6ZPA2 131 aa8.16□□□□□ -1.1
SYNE2-213ENST00000554805 KDF1Q8NAX2 398 aaPredicted RBP8.16□□□□□ -1.1
SYNE2-213ENST00000554805 TVP23CQ96ET8 276 aa8.16□□□□□ -1.1
SYNE2-213ENST00000554805 IL36GQ9NZH8 169 aa8.16□□□□□ -1.1
SYNE2-213ENST00000554805 KIAA1456Q9P272 454 aa8.16□□□□□ -1.1
SYNE2-213ENST00000554805 EXPH5Q8NEV8 1989 aa8.16□□□□□ -1.1
SYNE2-213ENST00000554805 IGHV3-64DA0A0J9YX35 117 aa8.16□□□□□ -1.1
SYNE2-213ENST00000554805 CD300LBA8K4G0 201 aa8.16□□□□□ -1.1
SYNE2-213ENST00000554805 CYB5BO43169 146 aa8.16□□□□□ -1.1
SYNE2-213ENST00000554805 DNPH1O43598 174 aa8.16□□□□□ -1.1
SYNE2-213ENST00000554805 SCAF4O95104 1147 aaKnown RBP8.16□□□□□ -1.1
SYNE2-213ENST00000554805 HBE1P02100 147 aa8.16□□□□□ -1.1
SYNE2-213ENST00000554805 SRP19P09132 144 aaKnown RBP8.16□□□□□ -1.1
SYNE2-213ENST00000554805 B3GALT5-AS1P59052 145 aa8.16□□□□□ -1.1
SYNE2-213ENST00000554805 GGNQ86UU5 652 aa8.16□□□□□ -1.1
SYNE2-213ENST00000554805 ERRFI1Q9UJM3 462 aaPredicted RBP8.16□□□□□ -1.1
SYNE2-213ENST00000554805 R4GN57 208 aa8.16□□□□□ -1.1
SYNE2-213ENST00000554805 BTBD17A6NE02 478 aa8.16□□□□□ -1.1
SYNE2-213ENST00000554805 SYNGR1O43759 233 aa8.16□□□□□ -1.1
SYNE2-213ENST00000554805 CYB561P49447 251 aa8.16□□□□□ -1.1
SYNE2-213ENST00000554805 UCP2P55851 309 aa8.16□□□□□ -1.1
SYNE2-213ENST00000554805 PLP2Q04941 152 aa8.16□□□□□ -1.1
SYNE2-213ENST00000554805 HIKESHIQ53FT3 197 aa8.16□□□□□ -1.1
SYNE2-213ENST00000554805 SPSB3Q6PJ21 355 aa8.16□□□□□ -1.1
SYNE2-213ENST00000554805 MCEMP1Q8IX19 187 aa8.16□□□□□ -1.1
SYNE2-213ENST00000554805 LINC00469Q8N7U9 141 aa8.16□□□□□ -1.1
SYNE2-213ENST00000554805 OR10J5Q8NHC4 309 aa8.16□□□□□ -1.1
SYNE2-213ENST00000554805 TECTBQ96PL2 329 aa8.16□□□□□ -1.1
SYNE2-213ENST00000554805 OR51M1Q9H341 326 aa8.16□□□□□ -1.1
SYNE2-213ENST00000554805 PPP1R3CQ9UQK1 317 aa8.16□□□□□ -1.1
SYNE2-213ENST00000554805 FAM166BA8MTA8 275 aa8.15□□□□□ -1.1
SYNE2-213ENST00000554805 SYNGR4O95473 234 aa8.15□□□□□ -1.1
SYNE2-213ENST00000554805 TMEM50AO95807 157 aa8.15□□□□□ -1.1
SYNE2-213ENST00000554805 FGF8P55075 233 aaPredicted RBP8.15□□□□□ -1.1
SYNE2-213ENST00000554805 MPV17LQ2QL34 196 aa8.15□□□□□ -1.1
SYNE2-213ENST00000554805 C4orf17Q53FE4 359 aa8.15□□□□□ -1.1
SYNE2-213ENST00000554805 TRIM61Q5EBN2 209 aa8.15□□□□□ -1.1
SYNE2-213ENST00000554805 SPINK14Q6IE38 97 aa8.15□□□□□ -1.1
SYNE2-213ENST00000554805 C17orf78Q8N4C9 275 aa8.15□□□□□ -1.1
SYNE2-213ENST00000554805 ZNF610Q8N9Z0 462 aa8.15□□□□□ -1.1
SYNE2-213ENST00000554805 TMEM56Q96MV1 263 aa8.15□□□□□ -1.1
SYNE2-213ENST00000554805 SPOCK3Q9BQ16 436 aa8.15□□□□□ -1.1
SYNE2-213ENST00000554805 LRFN1Q9P244 771 aa8.15□□□□□ -1.1
SYNE2-213ENST00000554805 TMEM56-RWDD3S4R434 201 aa8.15□□□□□ -1.1
SYNE2-213ENST00000554805 SPTA1P02549 2419 aa8.15□□□□□ -1.1
SYNE2-213ENST00000554805 TGIF2-C20orf24A0A0A6YYL0 155 aa8.15□□□□□ -1.1
SYNE2-213ENST00000554805 DFFBO76075 338 aa8.15□□□□□ -1.1
SYNE2-213ENST00000554805 PAX1P15863 534 aa8.15□□□□□ -1.1
SYNE2-213ENST00000554805 NKX6-1P78426 367 aaPredicted RBP8.15□□□□□ -1.1
SYNE2-213ENST00000554805 TLE1Q04724 770 aa8.15□□□□□ -1.1
SYNE2-213ENST00000554805 ATP5SQ99766 215 aa8.15□□□□□ -1.1
SYNE2-213ENST00000554805 RSG1Q9BU20 258 aa8.15□□□□□ -1.1
SYNE2-213ENST00000554805 PRO3102Q9H379 93 aa8.15□□□□□ -1.1
SYNE2-213ENST00000554805 PLSCR2Q9NRY7 297 aa8.15□□□□□ -1.1
SYNE2-213ENST00000554805 CRIM1Q9NZV1 1036 aa8.15□□□□□ -1.1
SYNE2-213ENST00000554805 PGLYRP1O75594 196 aaPredicted RBP8.15□□□□□ -1.11
SYNE2-213ENST00000554805 NGFP01138 241 aa8.15□□□□□ -1.11
SYNE2-213ENST00000554805 CTXN2P0C2S0 81 aa8.15□□□□□ -1.11
SYNE2-213ENST00000554805 METTL15P1P0C7V9 234 aa8.15□□□□□ -1.11
SYNE2-213ENST00000554805 PSG2P11465 335 aa8.15□□□□□ -1.11
SYNE2-213ENST00000554805 ELLP55199 621 aaPredicted RBP8.15□□□□□ -1.11
SYNE2-213ENST00000554805 FGF12P61328 243 aa8.15□□□□□ -1.11
SYNE2-213ENST00000554805 IL24Q13007 206 aa8.15□□□□□ -1.11
SYNE2-213ENST00000554805 C9orf152Q5JTZ5 239 aa8.15□□□□□ -1.11
SYNE2-213ENST00000554805 HEPN1Q6WQI6 88 aa8.15□□□□□ -1.11
SYNE2-213ENST00000554805 GPR146Q96CH1 333 aa8.15□□□□□ -1.11
SYNE2-213ENST00000554805 MUCL1Q96DR8 90 aa8.15□□□□□ -1.11
SYNE2-213ENST00000554805 PFDN5Q99471 154 aa8.15□□□□□ -1.11
SYNE2-213ENST00000554805 MTCH1Q9NZJ7 389 aa8.15□□□□□ -1.11
SYNE2-213ENST00000554805 CACNA1DQ01668 2161 aa8.15□□□□□ -1.11
SYNE2-213ENST00000554805 ESPL1Q14674 2120 aa8.14□□□□□ -1.11
SYNE2-213ENST00000554805 ANKRD30BLA7E2S9 258 aa8.14□□□□□ -1.11
SYNE2-213ENST00000554805 IGHV2-5P01817 119 aa8.14□□□□□ -1.11
SYNE2-213ENST00000554805 CYC1P08574 325 aa8.14□□□□□ -1.11
SYNE2-213ENST00000554805 DUSP3P51452 185 aaPredicted RBP8.14□□□□□ -1.11
SYNE2-213ENST00000554805 FOXG1P55316 489 aaPredicted RBP8.14□□□□□ -1.11
SYNE2-213ENST00000554805 FOXO1Q12778 655 aa8.14□□□□□ -1.11
SYNE2-213ENST00000554805 ICAM4Q14773 271 aa8.14□□□□□ -1.11
SYNE2-213ENST00000554805 IGFBP7Q16270 282 aa8.14□□□□□ -1.11
SYNE2-213ENST00000554805 RIPPLY2Q5TAB7 128 aa8.14□□□□□ -1.11
SYNE2-213ENST00000554805 ZNF787Q6DD87 383 aa8.14□□□□□ -1.11
SYNE2-213ENST00000554805 VASH2Q86V25 355 aa8.14□□□□□ -1.11
SYNE2-213ENST00000554805 TUSC5Q8IXB3 177 aa8.14□□□□□ -1.11
SYNE2-213ENST00000554805 OR10D4PQ8NGN7 298 aa8.14□□□□□ -1.11
SYNE2-213ENST00000554805 DEPPQ9NTK1 212 aa8.14□□□□□ -1.11
SYNE2-213ENST00000554805 DOK5Q9P104 306 aa8.14□□□□□ -1.11
SYNE2-213ENST00000554805 CACNG5Q9UF02 275 aa8.14□□□□□ -1.11
SYNE2-213ENST00000554805 CEBPZOSA8MTT3 80 aa8.14□□□□□ -1.11
SYNE2-213ENST00000554805 CXCL1P09341 107 aa8.14□□□□□ -1.11
SYNE2-213ENST00000554805 UCP1P25874 307 aa8.14□□□□□ -1.11
SYNE2-213ENST00000554805 TAS2R30P59541 319 aa8.14□□□□□ -1.11
SYNE2-213ENST00000554805 PLGLB1Q02325 96 aa8.14□□□□□ -1.11
SYNE2-213ENST00000554805 ID3Q02535 119 aa8.14□□□□□ -1.11
SYNE2-213ENST00000554805 BAXQ07812 192 aa8.14□□□□□ -1.11
SYNE2-213ENST00000554805 HERPUD1Q15011 391 aa8.14□□□□□ -1.11
SYNE2-213ENST00000554805 SPATA46Q5T0L3 261 aa8.14□□□□□ -1.11
SYNE2-213ENST00000554805 Q8WTZ3 238 aa8.14□□□□□ -1.11
SYNE2-213ENST00000554805 CLDN23Q96B33 292 aa8.14□□□□□ -1.11
SYNE2-213ENST00000554805 S100PBPQ96BU1 408 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms