RNA–Protein interactions for RNA: ENST00000554698.5

SDR39U1-208, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 1 (best) BASIC

Gene SDR39U1, Length 1,364 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-208ENST00000554698 OR4K15Q8NH41 348 aa17.5■□□□□ 0.39
SDR39U1-208ENST00000554698 CCDC107Q8WV48 283 aa17.5■□□□□ 0.39
SDR39U1-208ENST00000554698 MS4A7Q9GZW8 240 aaPredicted RBP17.5■□□□□ 0.39
SDR39U1-208ENST00000554698 MBNL3Q9NUK0 354 aaKnown RBP17.5■□□□□ 0.39
SDR39U1-208ENST00000554698 AK3Q9UIJ7 227 aa17.5■□□□□ 0.39
SDR39U1-208ENST00000554698 TRAPPC2LQ9UL33 140 aa17.5■□□□□ 0.39
SDR39U1-208ENST00000554698 KCNK7Q9Y2U2 307 aa17.5■□□□□ 0.39
SDR39U1-208ENST00000554698 CEPT1Q9Y6K0 416 aa17.5■□□□□ 0.39
SDR39U1-208ENST00000554698 C15orf65H3BRN8 121 aa17.49■□□□□ 0.39
SDR39U1-208ENST00000554698 ORC5O43913 435 aa17.49■□□□□ 0.39
SDR39U1-208ENST00000554698 SCGNO76038 276 aa17.49■□□□□ 0.39
SDR39U1-208ENST00000554698 FPR2P25090 351 aa17.49■□□□□ 0.39
SDR39U1-208ENST00000554698 SSTR5P35346 364 aa17.49■□□□□ 0.39
SDR39U1-208ENST00000554698 GDNFP39905 211 aa17.49■□□□□ 0.39
SDR39U1-208ENST00000554698 RORCP51449 518 aa17.49■□□□□ 0.39
SDR39U1-208ENST00000554698 BCL6BQ8N143 479 aaPredicted RBP17.49■□□□□ 0.39
SDR39U1-208ENST00000554698 PIP4P2Q8N4L2 257 aa17.49■□□□□ 0.39
SDR39U1-208ENST00000554698 C22orf15Q8WYQ4 148 aa17.49■□□□□ 0.39
SDR39U1-208ENST00000554698 ISOC1Q96CN7 298 aa17.49■□□□□ 0.39
SDR39U1-208ENST00000554698 TMEM133Q9H2Q1 129 aa17.49■□□□□ 0.39
SDR39U1-208ENST00000554698 MFNGO00587 321 aa17.48■□□□□ 0.39
SDR39U1-208ENST00000554698 HIST1H1DP16402 221 aaKnown RBP17.48■□□□□ 0.39
SDR39U1-208ENST00000554698 RCC1P18754 421 aaPredicted RBP17.48■□□□□ 0.39
SDR39U1-208ENST00000554698 OMGP23515 440 aa17.48■□□□□ 0.39
SDR39U1-208ENST00000554698 DYNC1I2Q13409 638 aaKnown RBP17.48■□□□□ 0.39
SDR39U1-208ENST00000554698 OLFML2AQ68BL7 652 aa17.48■□□□□ 0.39
SDR39U1-208ENST00000554698 OR52W1Q6IF63 320 aa17.48■□□□□ 0.39
SDR39U1-208ENST00000554698 ZNF554Q86TJ5 538 aa17.48■□□□□ 0.39
SDR39U1-208ENST00000554698 PNKDQ8N490 385 aa17.48■□□□□ 0.39
SDR39U1-208ENST00000554698 OR11H6Q8NGC7 330 aa17.48■□□□□ 0.39
SDR39U1-208ENST00000554698 OR13D1Q8NGV5 346 aa17.48■□□□□ 0.39
SDR39U1-208ENST00000554698 KIRREL1Q96J84 757 aa17.48■□□□□ 0.39
SDR39U1-208ENST00000554698 SLC6A7Q99884 636 aa17.48■□□□□ 0.39
SDR39U1-208ENST00000554698 RIMS4Q9H426 269 aaPredicted RBP17.48■□□□□ 0.39
SDR39U1-208ENST00000554698 SOX21Q9Y651 276 aaPredicted RBP17.48■□□□□ 0.39
SDR39U1-208ENST00000554698 TRBV6-6A0A0A6YYG2 114 aa17.47■□□□□ 0.39
SDR39U1-208ENST00000554698 H3BMQ9 156 aa17.47■□□□□ 0.39
SDR39U1-208ENST00000554698 NPFFO15130 113 aa17.47■□□□□ 0.39
SDR39U1-208ENST00000554698 NOL3O60936 208 aaKnown RBP17.47■□□□□ 0.39
SDR39U1-208ENST00000554698 COX7A1P24310 79 aa17.47■□□□□ 0.39
SDR39U1-208ENST00000554698 C6orf183Q5T699 404 aa17.47■□□□□ 0.39
SDR39U1-208ENST00000554698 TRAT1Q6PIZ9 186 aa17.47■□□□□ 0.39
SDR39U1-208ENST00000554698 Q6ZPA2 131 aa17.47■□□□□ 0.39
SDR39U1-208ENST00000554698 OR10A7Q8NGE5 316 aa17.47■□□□□ 0.39
SDR39U1-208ENST00000554698 RFESDQ8TAC1 157 aa17.47■□□□□ 0.39
SDR39U1-208ENST00000554698 RBM38Q9H0Z9 239 aaKnown RBP17.47■□□□□ 0.39
SDR39U1-208ENST00000554698 ABCG5Q9H222 651 aa17.47■□□□□ 0.39
SDR39U1-208ENST00000554698 C12orf4Q9NQ89 552 aa17.47■□□□□ 0.39
SDR39U1-208ENST00000554698 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP17.47■□□□□ 0.39
SDR39U1-208ENST00000554698 A0A087X0M5 115 aa17.46■□□□□ 0.39
SDR39U1-208ENST00000554698 A0A1B0GX30 115 aa17.46■□□□□ 0.39
SDR39U1-208ENST00000554698 POM121CA8CG34 1229 aa17.46■□□□□ 0.39
SDR39U1-208ENST00000554698 SERPINE3A8MV23 424 aa17.46■□□□□ 0.39
SDR39U1-208ENST00000554698 C12orf77C9JDV5 145 aa17.46■□□□□ 0.39
SDR39U1-208ENST00000554698 GNB3P16520 340 aa17.46■□□□□ 0.39
SDR39U1-208ENST00000554698 CD34P28906 385 aa17.46■□□□□ 0.39
SDR39U1-208ENST00000554698 ARL6IP1Q15041 203 aa17.46■□□□□ 0.39
SDR39U1-208ENST00000554698 MIDNQ504T8 468 aa17.46■□□□□ 0.39
SDR39U1-208ENST00000554698 ZNF880Q6PDB4 577 aa17.46■□□□□ 0.39
SDR39U1-208ENST00000554698 BAIAP2L2Q6UXY1 529 aa17.46■□□□□ 0.39
SDR39U1-208ENST00000554698 ACOT12Q8WYK0 555 aa17.46■□□□□ 0.39
SDR39U1-208ENST00000554698 ARL11Q969Q4 196 aa17.46■□□□□ 0.39
SDR39U1-208ENST00000554698 HDHD3Q9BSH5 251 aaPredicted RBP17.46■□□□□ 0.39
SDR39U1-208ENST00000554698 SUCNR1Q9BXA5 334 aa17.46■□□□□ 0.39
SDR39U1-208ENST00000554698 IDI2-AS1Q9NZ38 188 aa17.46■□□□□ 0.39
SDR39U1-208ENST00000554698 C2CD3Q4AC94 2353 aa17.45■□□□□ 0.38
SDR39U1-208ENST00000554698 A0A0A6YYH2 397 aa17.45■□□□□ 0.38
SDR39U1-208ENST00000554698 IGHV2-26A0A0B4J1V2 119 aa17.45■□□□□ 0.38
SDR39U1-208ENST00000554698 A0A1W2PRD5 423 aa17.45■□□□□ 0.38
SDR39U1-208ENST00000554698 A0A1W2PRF3 423 aa17.45■□□□□ 0.38
SDR39U1-208ENST00000554698 A0A1W2PRM7 423 aa17.45■□□□□ 0.38
SDR39U1-208ENST00000554698 A6NJ64 397 aa17.45■□□□□ 0.38
SDR39U1-208ENST00000554698 ODF3BA8MYP8 253 aa17.45■□□□□ 0.38
SDR39U1-208ENST00000554698 SAA4P35542 130 aa17.45■□□□□ 0.38
SDR39U1-208ENST00000554698 RIPPLY3P57055 190 aa17.45■□□□□ 0.38
SDR39U1-208ENST00000554698 UBE2NLQ5JXB2 153 aa17.45■□□□□ 0.38
SDR39U1-208ENST00000554698 SAMD12Q8N8I0 201 aa17.45■□□□□ 0.38
SDR39U1-208ENST00000554698 CMSS1Q9BQ75 279 aaKnown RBP17.45■□□□□ 0.38
SDR39U1-208ENST00000554698 CLEC7AQ9BXN2 247 aa17.45■□□□□ 0.38
SDR39U1-208ENST00000554698 ZMAT3Q9HA38 289 aaKnown RBP17.45■□□□□ 0.38
SDR39U1-208ENST00000554698 A0A0U1RQK1 487 aa17.44■□□□□ 0.38
SDR39U1-208ENST00000554698 F2RL2O00254 374 aa17.44■□□□□ 0.38
SDR39U1-208ENST00000554698 IFNA2P01563 188 aa17.44■□□□□ 0.38
SDR39U1-208ENST00000554698 ZNF182P17025 639 aaPredicted RBP17.44■□□□□ 0.38
SDR39U1-208ENST00000554698 CDNFQ49AH0 187 aa17.44■□□□□ 0.38
SDR39U1-208ENST00000554698 ZNF626Q68DY1 528 aa17.44■□□□□ 0.38
SDR39U1-208ENST00000554698 MOB1BQ7L9L4 216 aa17.44■□□□□ 0.38
SDR39U1-208ENST00000554698 DYNC2LI1Q8TCX1 351 aa17.44■□□□□ 0.38
SDR39U1-208ENST00000554698 AP3S1Q92572 193 aa17.44■□□□□ 0.38
SDR39U1-208ENST00000554698 ZNF48Q96MX3 618 aaPredicted RBP17.44■□□□□ 0.38
SDR39U1-208ENST00000554698 PRDM13Q9H4Q3 707 aa17.44■□□□□ 0.38
SDR39U1-208ENST00000554698 OCEL1Q9H607 264 aa17.44■□□□□ 0.38
SDR39U1-208ENST00000554698 TAF9BQ9HBM6 251 aa17.44■□□□□ 0.38
SDR39U1-208ENST00000554698 CHMP1AQ9HD42 196 aaPredicted RBP17.44■□□□□ 0.38
SDR39U1-208ENST00000554698 RAB9BQ9NP90 201 aa17.44■□□□□ 0.38
SDR39U1-208ENST00000554698 KCNIP1Q9NZI2 227 aa17.44■□□□□ 0.38
SDR39U1-208ENST00000554698 A0A075B6Q4 140 aa17.43■□□□□ 0.38
SDR39U1-208ENST00000554698 SPINT2O43291 252 aa17.43■□□□□ 0.38
SDR39U1-208ENST00000554698 HBZP02008 142 aa17.43■□□□□ 0.38
SDR39U1-208ENST00000554698 DEFB112Q30KQ8 113 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms