RNA–Protein interactions for RNA: ENST00000554604.5

SHMT2-214, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-214ENST00000554604 RSU1Q15404 277 aa10.33□□□□□ -0.76
SHMT2-214ENST00000554604 VAX1Q5SQQ9 334 aa10.33□□□□□ -0.76
SHMT2-214ENST00000554604 RBMS3Q6XE24 437 aaKnown RBP10.33□□□□□ -0.76
SHMT2-214ENST00000554604 MOB3CQ70IA8 216 aa10.33□□□□□ -0.76
SHMT2-214ENST00000554604 ZDHHC22Q8N966 263 aa10.33□□□□□ -0.76
SHMT2-214ENST00000554604 ZSCAN4Q8NAM6 433 aaPredicted RBP10.33□□□□□ -0.76
SHMT2-214ENST00000554604 ST8SIA4Q92187 359 aa10.33□□□□□ -0.76
SHMT2-214ENST00000554604 MRPS24Q96EL2 167 aaKnown RBP10.33□□□□□ -0.76
SHMT2-214ENST00000554604 ARHGAP5-AS1Q96IT6 56 aa10.33□□□□□ -0.76
SHMT2-214ENST00000554604 Q96M66 194 aa10.33□□□□□ -0.76
SHMT2-214ENST00000554604 PAPOLGQ9BWT3 736 aaKnown RBP10.33□□□□□ -0.76
SHMT2-214ENST00000554604 PECRQ9BY49 303 aa10.33□□□□□ -0.76
SHMT2-214ENST00000554604 SLA2Q9H6Q3 261 aa10.33□□□□□ -0.76
SHMT2-214ENST00000554604 ZNF69Q9UC07 566 aa10.33□□□□□ -0.76
SHMT2-214ENST00000554604 TRAV38-1A0A0B4J264 116 aa10.32□□□□□ -0.76
SHMT2-214ENST00000554604 TRIM77I1YAP6 450 aa10.32□□□□□ -0.76
SHMT2-214ENST00000554604 LGALS8O00214 317 aa10.32□□□□□ -0.76
SHMT2-214ENST00000554604 HTR3BO95264 441 aa10.32□□□□□ -0.76
SHMT2-214ENST00000554604 FSHBP01225 129 aa10.32□□□□□ -0.76
SHMT2-214ENST00000554604 CSTBP04080 98 aaKnown RBP10.32□□□□□ -0.76
SHMT2-214ENST00000554604 FCER2P06734 321 aa10.32□□□□□ -0.76
SHMT2-214ENST00000554604 CD80P33681 288 aa10.32□□□□□ -0.76
SHMT2-214ENST00000554604 HOXA4Q00056 320 aaPredicted RBP10.32□□□□□ -0.76
SHMT2-214ENST00000554604 ARFRP1Q13795 201 aa10.32□□□□□ -0.76
SHMT2-214ENST00000554604 DMRTC1Q5HYR2 192 aa10.32□□□□□ -0.76
SHMT2-214ENST00000554604 PLCXD3Q63HM9 321 aa10.32□□□□□ -0.76
SHMT2-214ENST00000554604 LYPD2Q6UXB3 125 aa10.32□□□□□ -0.76
SHMT2-214ENST00000554604 ZNF826PQ6ZT77 177 aa10.32□□□□□ -0.76
SHMT2-214ENST00000554604 HOGA1Q86XE5 327 aa10.32□□□□□ -0.76
SHMT2-214ENST00000554604 GVQW1Q8N7I0 195 aa10.32□□□□□ -0.76
SHMT2-214ENST00000554604 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.32□□□□□ -0.76
SHMT2-214ENST00000554604 OR4S1Q8NGB4 309 aa10.32□□□□□ -0.76
SHMT2-214ENST00000554604 OR13C8Q8NGS7 320 aa10.32□□□□□ -0.76
SHMT2-214ENST00000554604 OR10K1Q8NGX5 313 aa10.32□□□□□ -0.76
SHMT2-214ENST00000554604 PIGCQ92535 297 aa10.32□□□□□ -0.76
SHMT2-214ENST00000554604 ELL3Q9HB65 397 aaPredicted RBP10.32□□□□□ -0.76
SHMT2-214ENST00000554604 NUP50Q9UKX7 468 aa10.32□□□□□ -0.76
SHMT2-214ENST00000554604 HSF4Q9ULV5 492 aa10.32□□□□□ -0.76
SHMT2-214ENST00000554604 IGHV2-70DA0A0C4DH43 119 aa10.31□□□□□ -0.76
SHMT2-214ENST00000554604 OOEPA6NGQ2 149 aa10.31□□□□□ -0.76
SHMT2-214ENST00000554604 HAX1O00165 279 aa10.31□□□□□ -0.76
SHMT2-214ENST00000554604 ADAM20O43506 726 aa10.31□□□□□ -0.76
SHMT2-214ENST00000554604 SPRY1O43609 319 aaPredicted RBP10.31□□□□□ -0.76
SHMT2-214ENST00000554604 NDUFA2O43678 99 aa10.31□□□□□ -0.76
SHMT2-214ENST00000554604 OR2A4O95047 310 aa10.31□□□□□ -0.76
SHMT2-214ENST00000554604 GIPP09681 153 aaPredicted RBP10.31□□□□□ -0.76
SHMT2-214ENST00000554604 HRH1P35367 487 aa10.31□□□□□ -0.76
SHMT2-214ENST00000554604 NPY4RP50391 375 aa10.31□□□□□ -0.76
SHMT2-214ENST00000554604 PAX8Q06710 450 aa10.31□□□□□ -0.76
SHMT2-214ENST00000554604 PDZK1IP1Q13113 114 aa10.31□□□□□ -0.76
SHMT2-214ENST00000554604 ATPAF1Q5TC12 328 aaPredicted RBP10.31□□□□□ -0.76
SHMT2-214ENST00000554604 WDR25Q64LD2 544 aaPredicted RBP10.31□□□□□ -0.76
SHMT2-214ENST00000554604 OR52W1Q6IF63 320 aa10.31□□□□□ -0.76
SHMT2-214ENST00000554604 RTN4RL2Q86UN3 420 aa10.31□□□□□ -0.76
SHMT2-214ENST00000554604 SAXO1Q8IYX7 474 aa10.31□□□□□ -0.76
SHMT2-214ENST00000554604 ARRDC1Q8N5I2 433 aa10.31□□□□□ -0.76
SHMT2-214ENST00000554604 ASCC1Q8N9N2 400 aaKnown RBP10.31□□□□□ -0.76
SHMT2-214ENST00000554604 OR4K15Q8NH41 348 aa10.31□□□□□ -0.76
SHMT2-214ENST00000554604 ZNF431Q8TF32 576 aaPredicted RBP10.31□□□□□ -0.76
SHMT2-214ENST00000554604 ASB13Q8WXK3 278 aa10.31□□□□□ -0.76
SHMT2-214ENST00000554604 SNAPC3Q92966 411 aa10.31□□□□□ -0.76
SHMT2-214ENST00000554604 OR2A7Q96R45 310 aa10.31□□□□□ -0.76
SHMT2-214ENST00000554604 MICU1Q9BPX6 476 aa10.31□□□□□ -0.76
SHMT2-214ENST00000554604 GON7Q9BXV9 100 aa10.31□□□□□ -0.76
SHMT2-214ENST00000554604 MS4A7Q9GZW8 240 aaPredicted RBP10.31□□□□□ -0.76
SHMT2-214ENST00000554604 MGAT4CQ9UBM8 478 aa10.31□□□□□ -0.76
SHMT2-214ENST00000554604 KIR2DS1A0A191URI9 304 aa10.3□□□□□ -0.76
SHMT2-214ENST00000554604 PQLC2LA1A4F0 135 aa10.3□□□□□ -0.76
SHMT2-214ENST00000554604 ZNF850A8MQ14 1090 aa10.3□□□□□ -0.76
SHMT2-214ENST00000554604 SMLR1H3BR10 107 aa10.3□□□□□ -0.76
SHMT2-214ENST00000554604 H3BUI4 141 aa10.3□□□□□ -0.76
SHMT2-214ENST00000554604 ENSAO43768 121 aaKnown RBP10.3□□□□□ -0.76
SHMT2-214ENST00000554604 ANGPTL7O43827 346 aa10.3□□□□□ -0.76
SHMT2-214ENST00000554604 GYPAP02724 150 aa10.3□□□□□ -0.76
SHMT2-214ENST00000554604 IFNA6P05013 189 aa10.3□□□□□ -0.76
SHMT2-214ENST00000554604 OR4E1P0C645 316 aa10.3□□□□□ -0.76
SHMT2-214ENST00000554604 TAS2R46P59540 309 aa10.3□□□□□ -0.76
SHMT2-214ENST00000554604 RAP2BP61225 183 aa10.3□□□□□ -0.76
SHMT2-214ENST00000554604 PAX2Q02962 417 aa10.3□□□□□ -0.76
SHMT2-214ENST00000554604 PRDX4Q13162 271 aa10.3□□□□□ -0.76
SHMT2-214ENST00000554604 MICBQ29980 383 aa10.3□□□□□ -0.76
SHMT2-214ENST00000554604 LAMTOR1Q6IAA8 161 aa10.3□□□□□ -0.76
SHMT2-214ENST00000554604 C12orf54Q6X4T0 127 aa10.3□□□□□ -0.76
SHMT2-214ENST00000554604 ZDHHC23Q8IYP9 409 aa10.3□□□□□ -0.76
SHMT2-214ENST00000554604 OSR2Q8N2R0 312 aa10.3□□□□□ -0.76
SHMT2-214ENST00000554604 C9orf62Q8N4C0 152 aa10.3□□□□□ -0.76
SHMT2-214ENST00000554604 Q8NFD4 153 aa10.3□□□□□ -0.76
SHMT2-214ENST00000554604 OR52B4Q8NGK2 314 aa10.3□□□□□ -0.76
SHMT2-214ENST00000554604 LRRC29Q8WV35 223 aa10.3□□□□□ -0.76
SHMT2-214ENST00000554604 RTL8AQ9BWD3 113 aa10.3□□□□□ -0.76
SHMT2-214ENST00000554604 PLSCR3Q9NRY6 295 aa10.3□□□□□ -0.76
SHMT2-214ENST00000554604 MPC1Q9Y5U8 109 aa10.3□□□□□ -0.76
SHMT2-214ENST00000554604 NBEAL1Q6ZS30 2694 aa10.3□□□□□ -0.76
SHMT2-214ENST00000554604 IGHV3OR15-7A0A075B7D8 119 aa10.29□□□□□ -0.76
SHMT2-214ENST00000554604 IGKV1-12A0A0C4DH73 117 aa10.29□□□□□ -0.76
SHMT2-214ENST00000554604 FAM90A10PA6NDY2 464 aa10.29□□□□□ -0.76
SHMT2-214ENST00000554604 FAM90A18PA6NE21 464 aa10.29□□□□□ -0.76
SHMT2-214ENST00000554604 FAM90A16PA6NEW6 464 aa10.29□□□□□ -0.76
SHMT2-214ENST00000554604 FAM90A20PA6NIJ5 464 aa10.29□□□□□ -0.76
SHMT2-214ENST00000554604 FAM90A8PA6NJQ4 464 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms