RNA–Protein interactions for RNA: ENST00000554486.1

SCFD1-212, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-212ENST00000554486 LPAR5Q9H1C0 372 aa5.22□□□□□ -1.57
SCFD1-212ENST00000554486 ABCG5Q9H222 651 aa5.22□□□□□ -1.57
SCFD1-212ENST00000554486 MMP27Q9H306 513 aa5.22□□□□□ -1.57
SCFD1-212ENST00000554486 RHOFQ9HBH0 211 aa5.22□□□□□ -1.57
SCFD1-212ENST00000554486 BEX4Q9NWD9 120 aaPredicted RBP5.22□□□□□ -1.57
SCFD1-212ENST00000554486 TMEM160Q9NX00 188 aa5.22□□□□□ -1.57
SCFD1-212ENST00000554486 RHBDL2Q9NX52 303 aa5.22□□□□□ -1.57
SCFD1-212ENST00000554486 PTTG2Q9NZH5 202 aa5.22□□□□□ -1.57
SCFD1-212ENST00000554486 NLKQ9UBE8 527 aa5.22□□□□□ -1.57
SCFD1-212ENST00000554486 COMMD3Q9UBI1 195 aa5.22□□□□□ -1.57
SCFD1-212ENST00000554486 ZNF222Q9UK12 451 aa5.22□□□□□ -1.57
SCFD1-212ENST00000554486 ST3GAL6Q9Y274 331 aa5.22□□□□□ -1.57
SCFD1-212ENST00000554486 WIPI2Q9Y4P8 454 aa5.22□□□□□ -1.57
SCFD1-212ENST00000554486 NPTNQ9Y639 398 aa5.22□□□□□ -1.57
SCFD1-212ENST00000554486 ARHGAP32A7KAX9 2087 aa5.22□□□□□ -1.57
SCFD1-212ENST00000554486 DSCAML1Q8TD84 2053 aa5.22□□□□□ -1.57
SCFD1-212ENST00000554486 YLPM1P49750 1951 aaKnown RBP5.22□□□□□ -1.57
SCFD1-212ENST00000554486 CSMD2Q7Z408 3487 aa5.21□□□□□ -1.57
SCFD1-212ENST00000554486 MYO9AB2RTY4 2548 aa5.21□□□□□ -1.58
SCFD1-212ENST00000554486 PPIAL4EA0A075B759 164 aa5.21□□□□□ -1.58
SCFD1-212ENST00000554486 TRAV38-1A0A0B4J264 116 aa5.21□□□□□ -1.58
SCFD1-212ENST00000554486 OOEPA6NGQ2 149 aa5.21□□□□□ -1.58
SCFD1-212ENST00000554486 OR2AT4A6NND4 320 aa5.21□□□□□ -1.58
SCFD1-212ENST00000554486 PPIAL4DF5H284 164 aa5.21□□□□□ -1.58
SCFD1-212ENST00000554486 SOCS1O15524 211 aa5.21□□□□□ -1.58
SCFD1-212ENST00000554486 PPIHO43447 177 aaKnown RBP5.21□□□□□ -1.58
SCFD1-212ENST00000554486 FSTL3O95633 263 aa5.21□□□□□ -1.58
SCFD1-212ENST00000554486 HAND1O96004 215 aa5.21□□□□□ -1.58
SCFD1-212ENST00000554486 APOA1P02647 267 aa5.21□□□□□ -1.58
SCFD1-212ENST00000554486 GYPAP02724 150 aa5.21□□□□□ -1.58
SCFD1-212ENST00000554486 PPIAL4FP0DN26 164 aa5.21□□□□□ -1.58
SCFD1-212ENST00000554486 MUC1P15941 1255 aaPredicted RBP5.21□□□□□ -1.58
SCFD1-212ENST00000554486 ELK1P19419 428 aa5.21□□□□□ -1.58
SCFD1-212ENST00000554486 GIFP27352 417 aa5.21□□□□□ -1.58
SCFD1-212ENST00000554486 PRDX2P32119 198 aa5.21□□□□□ -1.58
SCFD1-212ENST00000554486 VEGFCP49767 419 aa5.21□□□□□ -1.58
SCFD1-212ENST00000554486 PDLIM4P50479 330 aa5.21□□□□□ -1.58
SCFD1-212ENST00000554486 ART1P52961 327 aa5.21□□□□□ -1.58
SCFD1-212ENST00000554486 TMEM50BP56557 158 aa5.21□□□□□ -1.58
SCFD1-212ENST00000554486 TMEM33P57088 247 aa5.21□□□□□ -1.58
SCFD1-212ENST00000554486 IL13RA2Q14627 380 aa5.21□□□□□ -1.58
SCFD1-212ENST00000554486 CARTPTQ16568 116 aa5.21□□□□□ -1.58
SCFD1-212ENST00000554486 TAF9Q16594 264 aa5.21□□□□□ -1.58
SCFD1-212ENST00000554486 MOGAT2Q3SYC2 334 aa5.21□□□□□ -1.58
SCFD1-212ENST00000554486 SPIN3Q5JUX0 258 aa5.21□□□□□ -1.58
SCFD1-212ENST00000554486 UBE2NLQ5JXB2 153 aa5.21□□□□□ -1.58
SCFD1-212ENST00000554486 AVPI1Q5T686 147 aa5.21□□□□□ -1.58
SCFD1-212ENST00000554486 DNM1P46Q6ZS02 220 aa5.21□□□□□ -1.58
SCFD1-212ENST00000554486 LRRC28Q86X40 367 aaPredicted RBP5.21□□□□□ -1.58
SCFD1-212ENST00000554486 CD177Q8N6Q3 437 aa5.21□□□□□ -1.58
SCFD1-212ENST00000554486 DEFB108BQ8NET1 73 aa5.21□□□□□ -1.58
SCFD1-212ENST00000554486 OR4M1Q8NGD0 313 aa5.21□□□□□ -1.58
SCFD1-212ENST00000554486 OR6Q1Q8NGQ2 317 aa5.21□□□□□ -1.58
SCFD1-212ENST00000554486 ANGPTL6Q8NI99 470 aa5.21□□□□□ -1.58
SCFD1-212ENST00000554486 CMTM3Q96MX0 182 aa5.21□□□□□ -1.58
SCFD1-212ENST00000554486 WDFY2Q96P53 400 aa5.21□□□□□ -1.58
SCFD1-212ENST00000554486 GAFA1Q96PS6 74 aa5.21□□□□□ -1.58
SCFD1-212ENST00000554486 TMEM246Q9BRR3 403 aa5.21□□□□□ -1.58
SCFD1-212ENST00000554486 PIMREGQ9BSJ6 248 aa5.21□□□□□ -1.58
SCFD1-212ENST00000554486 SEBOXQ9HB31 216 aaPredicted RBP5.21□□□□□ -1.58
SCFD1-212ENST00000554486 TMEM165Q9HC07 324 aa5.21□□□□□ -1.58
SCFD1-212ENST00000554486 PCDHB16Q9NRJ7 776 aa5.21□□□□□ -1.58
SCFD1-212ENST00000554486 PPIAL4AQ9Y536 164 aa5.21□□□□□ -1.58
SCFD1-212ENST00000554486 ZANQ9Y493 2812 aa5.21□□□□□ -1.58
SCFD1-212ENST00000554486 ABCA2Q9BZC7 2435 aa5.21□□□□□ -1.58
SCFD1-212ENST00000554486 SETXQ7Z333 2677 aaKnown RBP5.2□□□□□ -1.58
SCFD1-212ENST00000554486 WNK2Q9Y3S1 2297 aa5.2□□□□□ -1.58
SCFD1-212ENST00000554486 ITPR3Q14573 2671 aa5.2□□□□□ -1.58
SCFD1-212ENST00000554486 IGHV4-30-2A0A087WSY4 118 aa5.2□□□□□ -1.58
SCFD1-212ENST00000554486 TRAV24A0A0B4J272 114 aa5.2□□□□□ -1.58
SCFD1-212ENST00000554486 A0A1B0GW55 424 aa5.2□□□□□ -1.58
SCFD1-212ENST00000554486 FAM90A10PA6NDY2 464 aa5.2□□□□□ -1.58
SCFD1-212ENST00000554486 FAM90A8PA6NJQ4 464 aa5.2□□□□□ -1.58
SCFD1-212ENST00000554486 FAM90A7PA6NKC0 464 aa5.2□□□□□ -1.58
SCFD1-212ENST00000554486 FAM90A22PA8MWA6 464 aa5.2□□□□□ -1.58
SCFD1-212ENST00000554486 FAM90A12PA8MX19 464 aa5.2□□□□□ -1.58
SCFD1-212ENST00000554486 FAM90A23PA8MXZ1 464 aa5.2□□□□□ -1.58
SCFD1-212ENST00000554486 SLC33A1O00400 549 aaPredicted RBP5.2□□□□□ -1.58
SCFD1-212ENST00000554486 SH2D1BO14796 132 aa5.2□□□□□ -1.58
SCFD1-212ENST00000554486 SIGLEC5O15389 551 aa5.2□□□□□ -1.58
SCFD1-212ENST00000554486 RGS5O15539 181 aa5.2□□□□□ -1.58
SCFD1-212ENST00000554486 PDCD6O75340 191 aa5.2□□□□□ -1.58
SCFD1-212ENST00000554486 FCN3O75636 299 aa5.2□□□□□ -1.58
SCFD1-212ENST00000554486 OR7C1O76099 320 aaPredicted RBP5.2□□□□□ -1.58
SCFD1-212ENST00000554486 OR2H2O95918 312 aa5.2□□□□□ -1.58
SCFD1-212ENST00000554486 FAM90A13PP0C7W8 464 aa5.2□□□□□ -1.58
SCFD1-212ENST00000554486 FAM90A24PP0C7X0 464 aa5.2□□□□□ -1.58
SCFD1-212ENST00000554486 DUX4L2P0CJ85 424 aa5.2□□□□□ -1.58
SCFD1-212ENST00000554486 DUX4L3P0CJ86 424 aa5.2□□□□□ -1.58
SCFD1-212ENST00000554486 DUX4L4P0CJ87 422 aa5.2□□□□□ -1.58
SCFD1-212ENST00000554486 DUX4L5P0CJ88 424 aa5.2□□□□□ -1.58
SCFD1-212ENST00000554486 DUX4L6P0CJ89 424 aa5.2□□□□□ -1.58
SCFD1-212ENST00000554486 DUX4L7P0CJ90 424 aa5.2□□□□□ -1.58
SCFD1-212ENST00000554486 SELLP14151 372 aa5.2□□□□□ -1.58
SCFD1-212ENST00000554486 CPT2P23786 658 aa5.2□□□□□ -1.58
SCFD1-212ENST00000554486 GABRR1P24046 479 aa5.2□□□□□ -1.58
SCFD1-212ENST00000554486 CDK2P24941 298 aa5.2□□□□□ -1.58
SCFD1-212ENST00000554486 CHATP28329 748 aa5.2□□□□□ -1.58
SCFD1-212ENST00000554486 BLVRBP30043 206 aaPredicted RBP5.2□□□□□ -1.58
SCFD1-212ENST00000554486 TNFSF8P32971 234 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms