RNA–Protein interactions for RNA: ENST00000553882.1

ACTN1-211, Transcript of actinin alpha 1, humanhuman

TSL 2

Gene ACTN1, Length 2,636 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-211ENST00000553882 KCNJ16Q9NPI9 418 aa12.43□□□□□ -0.42
ACTN1-211ENST00000553882 LYRM2Q9NU23 88 aaPredicted RBP12.43□□□□□ -0.42
ACTN1-211ENST00000553882 IL17BQ9UHF5 180 aa12.43□□□□□ -0.42
ACTN1-211ENST00000553882 LAMA5O15230 3695 aa12.43□□□□□ -0.42
ACTN1-211ENST00000553882 A6NLC8 198 aa12.42□□□□□ -0.42
ACTN1-211ENST00000553882 CHST1O43916 411 aa12.42□□□□□ -0.42
ACTN1-211ENST00000553882 TUSC2O75896 110 aa12.42□□□□□ -0.42
ACTN1-211ENST00000553882 SLC34A2O95436 690 aa12.42□□□□□ -0.42
ACTN1-211ENST00000553882 ARG1P05089 322 aa12.42□□□□□ -0.42
ACTN1-211ENST00000553882 DYNLT3P51808 116 aa12.42□□□□□ -0.42
ACTN1-211ENST00000553882 CEBPGP53567 150 aa12.42□□□□□ -0.42
ACTN1-211ENST00000553882 UCP2P55851 309 aa12.42□□□□□ -0.42
ACTN1-211ENST00000553882 ZNF154Q13106 437 aa12.42□□□□□ -0.42
ACTN1-211ENST00000553882 SAXO1Q8IYX7 474 aa12.42□□□□□ -0.42
ACTN1-211ENST00000553882 COMMD1Q8N668 190 aa12.42□□□□□ -0.42
ACTN1-211ENST00000553882 OR5A2Q8NGI9 324 aa12.42□□□□□ -0.42
ACTN1-211ENST00000553882 PLEKHF2Q9H8W4 249 aa12.42□□□□□ -0.42
ACTN1-211ENST00000553882 STRAPQ9Y3F4 350 aaKnown RBP12.42□□□□□ -0.42
ACTN1-211ENST00000553882 LIPGQ9Y5X9 500 aa12.42□□□□□ -0.42
ACTN1-211ENST00000553882 TNRC6AQ8NDV7 1962 aaKnown RBP12.42□□□□□ -0.42
ACTN1-211ENST00000553882 TRAV24A0A0B4J272 114 aa12.42□□□□□ -0.42
ACTN1-211ENST00000553882 A0A0G2JRQ6 117 aa12.42□□□□□ -0.42
ACTN1-211ENST00000553882 A0A1W2PPH5 198 aa12.42□□□□□ -0.42
ACTN1-211ENST00000553882 ANKRD30BLA7E2S9 258 aa12.42□□□□□ -0.42
ACTN1-211ENST00000553882 WRBO00258 174 aa12.42□□□□□ -0.42
ACTN1-211ENST00000553882 VDAC1P21796 283 aa12.42□□□□□ -0.42
ACTN1-211ENST00000553882 UCP1P25874 307 aa12.42□□□□□ -0.42
ACTN1-211ENST00000553882 SNRPEP62304 92 aaKnown RBP12.42□□□□□ -0.42
ACTN1-211ENST00000553882 HMGN3Q15651 99 aa12.42□□□□□ -0.42
ACTN1-211ENST00000553882 SHEQ5VZ18 495 aa12.42□□□□□ -0.42
ACTN1-211ENST00000553882 FIP1L1Q6UN15 594 aaKnown RBP12.42□□□□□ -0.42
ACTN1-211ENST00000553882 PCSK4Q6UW60 755 aa12.42□□□□□ -0.42
ACTN1-211ENST00000553882 P4HA3Q7Z4N8 544 aa12.42□□□□□ -0.42
ACTN1-211ENST00000553882 ODF3L1Q8IXM7 274 aa12.42□□□□□ -0.42
ACTN1-211ENST00000553882 OR5P3Q8WZ94 311 aa12.42□□□□□ -0.42
ACTN1-211ENST00000553882 SS18L1O75177 396 aaPredicted RBP12.41□□□□□ -0.42
ACTN1-211ENST00000553882 PITX3O75364 302 aa12.41□□□□□ -0.42
ACTN1-211ENST00000553882 PGLYRP1O75594 196 aaPredicted RBP12.41□□□□□ -0.42
ACTN1-211ENST00000553882 ARR3P36575 388 aa12.41□□□□□ -0.42
ACTN1-211ENST00000553882 RND3P61587 244 aa12.41□□□□□ -0.42
ACTN1-211ENST00000553882 CLN3Q13286 438 aa12.41□□□□□ -0.42
ACTN1-211ENST00000553882 C15orf54Q8N8G6 183 aa12.41□□□□□ -0.42
ACTN1-211ENST00000553882 SFT2D1Q8WV19 159 aa12.41□□□□□ -0.42
ACTN1-211ENST00000553882 PBDC1Q9BVG4 233 aa12.41□□□□□ -0.42
ACTN1-211ENST00000553882 DDA1Q9BW61 102 aa12.41□□□□□ -0.42
ACTN1-211ENST00000553882 SLC35B3Q9H1N7 401 aa12.41□□□□□ -0.42
ACTN1-211ENST00000553882 ABI3Q9P2A4 366 aa12.41□□□□□ -0.42
ACTN1-211ENST00000553882 ERRFI1Q9UJM3 462 aaPredicted RBP12.41□□□□□ -0.42
ACTN1-211ENST00000553882 PUS1Q9Y606 427 aaKnown RBP eCLIP12.41□□□□□ -0.42
ACTN1-211ENST00000553882 hCG_1809904A0A1W2PP81 198 aa12.41□□□□□ -0.42
ACTN1-211ENST00000553882 A0A1W2PR64 198 aa12.41□□□□□ -0.42
ACTN1-211ENST00000553882 A0A1W2PR80 420 aa12.41□□□□□ -0.42
ACTN1-211ENST00000553882 A0A1W2PRV1 198 aa12.41□□□□□ -0.42
ACTN1-211ENST00000553882 CBR1P16152 277 aa12.41□□□□□ -0.42
ACTN1-211ENST00000553882 APLNRP35414 380 aa12.41□□□□□ -0.42
ACTN1-211ENST00000553882 OR10J5Q8NHC4 309 aa12.41□□□□□ -0.42
ACTN1-211ENST00000553882 OR1A1Q9P1Q5 309 aa12.41□□□□□ -0.42
ACTN1-211ENST00000553882 GTF3C1Q12789 2109 aa12.41□□□□□ -0.42
ACTN1-211ENST00000553882 PRR14LQ5THK1 2151 aa12.41□□□□□ -0.42
ACTN1-211ENST00000553882 ARHGAP21Q5T5U3 1957 aa12.41□□□□□ -0.42
ACTN1-211ENST00000553882 A0A1W2PPE2 198 aa12.41□□□□□ -0.42
ACTN1-211ENST00000553882 IL18BPO95998 194 aa12.41□□□□□ -0.42
ACTN1-211ENST00000553882 COX5BP10606 129 aa12.41□□□□□ -0.42
ACTN1-211ENST00000553882 LMO1P25800 156 aa12.41□□□□□ -0.42
ACTN1-211ENST00000553882 MEOX1P50221 254 aa12.41□□□□□ -0.42
ACTN1-211ENST00000553882 RAB5BP61020 215 aa12.41□□□□□ -0.42
ACTN1-211ENST00000553882 FAM58AQ8N1B3 248 aa12.41□□□□□ -0.42
ACTN1-211ENST00000553882 FAM24BQ8N5W8 94 aa12.41□□□□□ -0.42
ACTN1-211ENST00000553882 IL22RA1Q8N6P7 574 aa12.41□□□□□ -0.42
ACTN1-211ENST00000553882 PLPPR1Q8TBJ4 325 aa12.41□□□□□ -0.42
ACTN1-211ENST00000553882 SLC25A31Q9H0C2 315 aa12.41□□□□□ -0.42
ACTN1-211ENST00000553882 DEFB127Q9H1M4 99 aa12.41□□□□□ -0.42
ACTN1-211ENST00000553882 TAAR3PQ9P1P4 343 aa12.41□□□□□ -0.42
ACTN1-211ENST00000553882 CACNA1DQ01668 2161 aa12.4□□□□□ -0.42
ACTN1-211ENST00000553882 PSG2P11465 335 aa12.4□□□□□ -0.42
ACTN1-211ENST00000553882 PTAFRP25105 342 aa12.4□□□□□ -0.42
ACTN1-211ENST00000553882 GNG3P63215 75 aa12.4□□□□□ -0.42
ACTN1-211ENST00000553882 ID3Q02535 119 aa12.4□□□□□ -0.42
ACTN1-211ENST00000553882 HAGHQ16775 308 aa12.4□□□□□ -0.42
ACTN1-211ENST00000553882 ATP1A1-AS1Q5TC04 95 aa12.4□□□□□ -0.42
ACTN1-211ENST00000553882 TMEM164Q5U3C3 297 aa12.4□□□□□ -0.42
ACTN1-211ENST00000553882 POM121Q96HA1 1249 aa12.4□□□□□ -0.42
ACTN1-211ENST00000553882 RNF122Q9H9V4 155 aa12.4□□□□□ -0.42
ACTN1-211ENST00000553882 KMT2EQ8IZD2 1858 aa12.4□□□□□ -0.43
ACTN1-211ENST00000553882 F2RP25116 425 aa12.4□□□□□ -0.43
ACTN1-211ENST00000553882 SULT1A1P50225 295 aa12.4□□□□□ -0.43
ACTN1-211ENST00000553882 SRSF7Q16629 238 aaKnown RBP eCLIP12.4□□□□□ -0.43
ACTN1-211ENST00000553882 ZNF573Q86YE8 665 aa12.4□□□□□ -0.43
ACTN1-211ENST00000553882 RNASE11Q8TAA1 199 aaKnown RBP12.4□□□□□ -0.43
ACTN1-211ENST00000553882 COA4Q9NYJ1 87 aa12.4□□□□□ -0.43
ACTN1-211ENST00000553882 DLL3Q9NYJ7 618 aa12.4□□□□□ -0.43
ACTN1-211ENST00000553882 C1orf196B1AJZ1 125 aa12.39□□□□□ -0.43
ACTN1-211ENST00000553882 H0Y980 276 aa12.39□□□□□ -0.43
ACTN1-211ENST00000553882 MT-CO3P00414 261 aa12.39□□□□□ -0.43
ACTN1-211ENST00000553882 SERPINE2P07093 398 aa12.39□□□□□ -0.43
ACTN1-211ENST00000553882 CTXN2P0C2S0 81 aa12.39□□□□□ -0.43
ACTN1-211ENST00000553882 SOHLH1Q5JUK2 328 aa12.39□□□□□ -0.43
ACTN1-211ENST00000553882 DBX2Q6ZNG2 339 aa12.39□□□□□ -0.43
ACTN1-211ENST00000553882 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.39□□□□□ -0.43
ACTN1-211ENST00000553882 MDP1Q86V88 176 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms