RNA–Protein interactions for RNA: ENST00000553855.5

PSEN1-209, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,254 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-209ENST00000553855 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.81□□□□□ -1.32
PSEN1-209ENST00000553855 ZDHHC22Q8N966 263 aa6.81□□□□□ -1.32
PSEN1-209ENST00000553855 SUMF2Q8NBJ7 301 aa6.81□□□□□ -1.32
PSEN1-209ENST00000553855 Q8NFD4 153 aa6.81□□□□□ -1.32
PSEN1-209ENST00000553855 OR6M1Q8NGM8 313 aa6.81□□□□□ -1.32
PSEN1-209ENST00000553855 OR5R1Q8NH85 324 aa6.81□□□□□ -1.32
PSEN1-209ENST00000553855 KCNG3Q8TAE7 436 aa6.81□□□□□ -1.32
PSEN1-209ENST00000553855 NDNFQ8TB73 568 aa6.81□□□□□ -1.32
PSEN1-209ENST00000553855 TNFRSF14Q92956 283 aa6.81□□□□□ -1.32
PSEN1-209ENST00000553855 ZNF48Q96MX3 618 aaPredicted RBP6.81□□□□□ -1.32
PSEN1-209ENST00000553855 DUX5Q96PT3 197 aa6.81□□□□□ -1.32
PSEN1-209ENST00000553855 NEDD4LQ96PU5 975 aa6.81□□□□□ -1.32
PSEN1-209ENST00000553855 NKX3-1Q99801 234 aaPredicted RBP6.81□□□□□ -1.32
PSEN1-209ENST00000553855 URM1Q9BTM9 101 aaKnown RBP6.81□□□□□ -1.32
PSEN1-209ENST00000553855 DPCDQ9BVM2 203 aaPredicted RBP6.81□□□□□ -1.32
PSEN1-209ENST00000553855 SELENOIQ9C0D9 397 aa6.81□□□□□ -1.32
PSEN1-209ENST00000553855 ABCB10Q9NRK6 738 aa6.81□□□□□ -1.32
PSEN1-209ENST00000553855 TBL2Q9Y4P3 447 aaKnown RBP6.81□□□□□ -1.32
PSEN1-209ENST00000553855 WNK2Q9Y3S1 2297 aa6.8□□□□□ -1.32
PSEN1-209ENST00000553855 TRAV24A0A0B4J272 114 aa6.8□□□□□ -1.32
PSEN1-209ENST00000553855 MDFIC2A0A1B0GVS7 189 aa6.8□□□□□ -1.32
PSEN1-209ENST00000553855 MEX3AA1L020 520 aaKnown RBP6.8□□□□□ -1.32
PSEN1-209ENST00000553855 MAGEA13PA6NCF6 341 aa6.8□□□□□ -1.32
PSEN1-209ENST00000553855 TNFAIP8O95379 198 aa6.8□□□□□ -1.32
PSEN1-209ENST00000553855 GLAP06280 429 aa6.8□□□□□ -1.32
PSEN1-209ENST00000553855 ARSBP15848 533 aa6.8□□□□□ -1.32
PSEN1-209ENST00000553855 GZMHP20718 246 aa6.8□□□□□ -1.32
PSEN1-209ENST00000553855 CDK2P24941 298 aa6.8□□□□□ -1.32
PSEN1-209ENST00000553855 PRRX1P54821 245 aa6.8□□□□□ -1.32
PSEN1-209ENST00000553855 PRB3Q04118 309 aaPredicted RBP6.8□□□□□ -1.32
PSEN1-209ENST00000553855 INSL4Q14641 139 aa6.8□□□□□ -1.32
PSEN1-209ENST00000553855 FAM189A2Q15884 450 aa6.8□□□□□ -1.32
PSEN1-209ENST00000553855 RAB11BQ15907 218 aa6.8□□□□□ -1.32
PSEN1-209ENST00000553855 TAF9Q16594 264 aa6.8□□□□□ -1.32
PSEN1-209ENST00000553855 FAM27D1Q5T7N8 215 aa6.8□□□□□ -1.32
PSEN1-209ENST00000553855 UBE2UQ5VVX9 321 aa6.8□□□□□ -1.32
PSEN1-209ENST00000553855 GDPGP1Q6ZNW5 385 aa6.8□□□□□ -1.32
PSEN1-209ENST00000553855 LDLRAD3Q86YD5 345 aa6.8□□□□□ -1.32
PSEN1-209ENST00000553855 SPARTQ8N0X7 666 aa6.8□□□□□ -1.32
PSEN1-209ENST00000553855 DTX3Q8N9I9 347 aa6.8□□□□□ -1.32
PSEN1-209ENST00000553855 ZNF596Q8TC21 504 aa6.8□□□□□ -1.32
PSEN1-209ENST00000553855 CORO2AQ92828 525 aa6.8□□□□□ -1.32
PSEN1-209ENST00000553855 CREB3L1Q96BA8 519 aa6.8□□□□□ -1.32
PSEN1-209ENST00000553855 CLEC7AQ9BXN2 247 aa6.8□□□□□ -1.32
PSEN1-209ENST00000553855 TMEM59Q9BXS4 323 aa6.8□□□□□ -1.32
PSEN1-209ENST00000553855 TMEM133Q9H2Q1 129 aa6.8□□□□□ -1.32
PSEN1-209ENST00000553855 PRDM13Q9H4Q3 707 aa6.8□□□□□ -1.32
PSEN1-209ENST00000553855 NCOR1P1Q9H4R4 102 aa6.8□□□□□ -1.32
PSEN1-209ENST00000553855 BANF2Q9H503 90 aa6.8□□□□□ -1.32
PSEN1-209ENST00000553855 RAB18Q9NP72 206 aa6.8□□□□□ -1.32
PSEN1-209ENST00000553855 ESM1Q9NQ30 184 aa6.8□□□□□ -1.32
PSEN1-209ENST00000553855 ETAA1Q9NY74 926 aa6.8□□□□□ -1.32
PSEN1-209ENST00000553855 KCNIP1Q9NZI2 227 aa6.8□□□□□ -1.32
PSEN1-209ENST00000553855 KIF25Q9UIL4 384 aa6.8□□□□□ -1.32
PSEN1-209ENST00000553855 TRAPPC2LQ9UL33 140 aa6.8□□□□□ -1.32
PSEN1-209ENST00000553855 SSR3Q9UNL2 185 aa6.8□□□□□ -1.32
PSEN1-209ENST00000553855 PEX16Q9Y5Y5 336 aa6.8□□□□□ -1.32
PSEN1-209ENST00000553855 ARHGAP32A7KAX9 2087 aa6.8□□□□□ -1.32
PSEN1-209ENST00000553855 KBTBD11-OT1A0A1B0GTJ5 212 aa6.79□□□□□ -1.32
PSEN1-209ENST00000553855 AIPO00170 330 aa6.79□□□□□ -1.32
PSEN1-209ENST00000553855 CA11O75493 328 aa6.79□□□□□ -1.32
PSEN1-209ENST00000553855 SC5DO75845 299 aa6.79□□□□□ -1.32
PSEN1-209ENST00000553855 FUT3P21217 361 aa6.79□□□□□ -1.32
PSEN1-209ENST00000553855 GALP22466 123 aa6.79□□□□□ -1.32
PSEN1-209ENST00000553855 NFYBP25208 207 aa6.79□□□□□ -1.32
PSEN1-209ENST00000553855 HTR1DP28221 377 aa6.79□□□□□ -1.32
PSEN1-209ENST00000553855 CEACAM3P40198 252 aa6.79□□□□□ -1.32
PSEN1-209ENST00000553855 RPL15P61313 204 aaKnown RBP6.79□□□□□ -1.32
PSEN1-209ENST00000553855 MRPS15P82914 257 aaKnown RBP6.79□□□□□ -1.32
PSEN1-209ENST00000553855 FABP5Q01469 135 aa6.79□□□□□ -1.32
PSEN1-209ENST00000553855 KCTD21Q4G0X4 260 aa6.79□□□□□ -1.32
PSEN1-209ENST00000553855 C1orf100Q5SVJ3 147 aa6.79□□□□□ -1.32
PSEN1-209ENST00000553855 C6orf183Q5T699 404 aa6.79□□□□□ -1.32
PSEN1-209ENST00000553855 MINOS1Q5TGZ0 78 aa6.79□□□□□ -1.32
PSEN1-209ENST00000553855 PRAMEF5Q5TYX0 476 aa6.79□□□□□ -1.32
PSEN1-209ENST00000553855 SLC35E4Q6ICL7 350 aa6.79□□□□□ -1.32
PSEN1-209ENST00000553855 RAB12Q6IQ22 244 aa6.79□□□□□ -1.32
PSEN1-209ENST00000553855 TRAT1Q6PIZ9 186 aa6.79□□□□□ -1.32
PSEN1-209ENST00000553855 CRIP3Q6Q6R5 217 aa6.79□□□□□ -1.32
PSEN1-209ENST00000553855 HEPN1Q6WQI6 88 aa6.79□□□□□ -1.32
PSEN1-209ENST00000553855 LRRTM1Q86UE6 522 aa6.79□□□□□ -1.32
PSEN1-209ENST00000553855 ABHD12Q8N2K0 398 aa6.79□□□□□ -1.32
PSEN1-209ENST00000553855 C3orf56Q8N813 242 aa6.79□□□□□ -1.32
PSEN1-209ENST00000553855 BEND2Q8NDZ0 799 aa6.79□□□□□ -1.32
PSEN1-209ENST00000553855 OR4F5Q8NH21 305 aa6.79□□□□□ -1.32
PSEN1-209ENST00000553855 CAPSLQ8WWF8 208 aa6.79□□□□□ -1.32
PSEN1-209ENST00000553855 DYRK2Q92630 601 aa6.79□□□□□ -1.32
PSEN1-209ENST00000553855 FAM46BQ96A09 425 aa6.79□□□□□ -1.32
PSEN1-209ENST00000553855 MALSU1Q96EH3 234 aa6.79□□□□□ -1.32
PSEN1-209ENST00000553855 COQ2Q96H96 371 aa6.79□□□□□ -1.32
PSEN1-209ENST00000553855 NDUFB11Q9NX14 153 aa6.79□□□□□ -1.32
PSEN1-209ENST00000553855 CALYQ9NYX4 217 aa6.79□□□□□ -1.32
PSEN1-209ENST00000553855 ZNRD1Q9P1U0 126 aa6.79□□□□□ -1.32
PSEN1-209ENST00000553855 AK6Q9Y3D8 172 aaKnown RBP6.79□□□□□ -1.32
PSEN1-209ENST00000553855 AMMECR1Q9Y4X0 333 aaPredicted RBP6.79□□□□□ -1.32
PSEN1-209ENST00000553855 SOX21Q9Y651 276 aaPredicted RBP6.79□□□□□ -1.32
PSEN1-209ENST00000553855 MINOS1-NBL1R4GNA1 71 aa6.79□□□□□ -1.32
PSEN1-209ENST00000553855 V9GY05 133 aa6.79□□□□□ -1.32
PSEN1-209ENST00000553855 DOCK11Q5JSL3 2073 aa6.79□□□□□ -1.32
PSEN1-209ENST00000553855 A0A087WXM4 84 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms