RNA–Protein interactions for RNA: ENST00000553602.1

TMEM55B-204, humanhuman

TSL 2

Gene TMEM55B, Length 382 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-204ENST00000553602 HLA-DRB3P79483 266 aa4.5□□□□□ -1.69
TMEM55B-204ENST00000553602 DLK1P80370 383 aa4.5□□□□□ -1.69
TMEM55B-204ENST00000553602 PSG4Q00888 419 aa4.5□□□□□ -1.69
TMEM55B-204ENST00000553602 CEACAM21Q3KPI0 293 aa4.5□□□□□ -1.69
TMEM55B-204ENST00000553602 LBHQ53QV2 105 aaPredicted RBP4.5□□□□□ -1.69
TMEM55B-204ENST00000553602 COA6Q5JTJ3 125 aaKnown RBP4.5□□□□□ -1.69
TMEM55B-204ENST00000553602 LCE2CQ5TA81 110 aa4.5□□□□□ -1.69
TMEM55B-204ENST00000553602 TSPO2Q5TGU0 170 aa4.5□□□□□ -1.69
TMEM55B-204ENST00000553602 PRAMEF20Q5VT98 475 aa4.5□□□□□ -1.69
TMEM55B-204ENST00000553602 ADAM5Q6NVV9 412 aa4.5□□□□□ -1.69
TMEM55B-204ENST00000553602 ZNF774Q6NX45 483 aa4.5□□□□□ -1.69
TMEM55B-204ENST00000553602 GUSBP11Q6P575 273 aa4.5□□□□□ -1.69
TMEM55B-204ENST00000553602 ZNF818PQ6ZRF7 136 aa4.5□□□□□ -1.69
TMEM55B-204ENST00000553602 CENPVQ7Z7K6 275 aaPredicted RBP4.5□□□□□ -1.69
TMEM55B-204ENST00000553602 ZNF429Q86V71 674 aa4.5□□□□□ -1.69
TMEM55B-204ENST00000553602 TGIF2LYQ8IUE0 185 aa4.5□□□□□ -1.69
TMEM55B-204ENST00000553602 ODF3L1Q8IXM7 274 aa4.5□□□□□ -1.69
TMEM55B-204ENST00000553602 MKXQ8IYA7 352 aa4.5□□□□□ -1.69
TMEM55B-204ENST00000553602 GAPTQ8N292 157 aa4.5□□□□□ -1.69
TMEM55B-204ENST00000553602 AGBL5Q8NDL9 886 aa4.5□□□□□ -1.69
TMEM55B-204ENST00000553602 OR5C1Q8NGR4 320 aa4.5□□□□□ -1.69
TMEM55B-204ENST00000553602 OR11L1Q8NGX0 322 aa4.5□□□□□ -1.69
TMEM55B-204ENST00000553602 OR2AE1Q8NHA4 323 aa4.5□□□□□ -1.69
TMEM55B-204ENST00000553602 RNASEH2CQ8TDP1 164 aaKnown RBP4.5□□□□□ -1.69
TMEM55B-204ENST00000553602 SAP25Q8TEE9 199 aa4.5□□□□□ -1.69
TMEM55B-204ENST00000553602 Q8WTZ3 238 aa4.5□□□□□ -1.69
TMEM55B-204ENST00000553602 RELTQ969Z4 430 aa4.5□□□□□ -1.69
TMEM55B-204ENST00000553602 APOBEC3DQ96AK3 386 aaPredicted RBP4.5□□□□□ -1.69
TMEM55B-204ENST00000553602 PINX1Q96BK5 328 aaKnown RBP4.5□□□□□ -1.69
TMEM55B-204ENST00000553602 SSX3Q99909 188 aa4.5□□□□□ -1.69
TMEM55B-204ENST00000553602 GGACTQ9BVM4 153 aa4.5□□□□□ -1.69
TMEM55B-204ENST00000553602 PKIBQ9C010 78 aa4.5□□□□□ -1.69
TMEM55B-204ENST00000553602 STRADBQ9C0K7 418 aa4.5□□□□□ -1.69
TMEM55B-204ENST00000553602 ZNF442Q9H7R0 627 aa4.5□□□□□ -1.69
TMEM55B-204ENST00000553602 CRLF2Q9HC73 371 aa4.5□□□□□ -1.69
TMEM55B-204ENST00000553602 GPR35Q9HC97 309 aa4.5□□□□□ -1.69
TMEM55B-204ENST00000553602 SLC7A10Q9NS82 523 aa4.5□□□□□ -1.69
TMEM55B-204ENST00000553602 TAAR3PQ9P1P4 343 aa4.5□□□□□ -1.69
TMEM55B-204ENST00000553602 WNT16Q9UBV4 365 aa4.5□□□□□ -1.69
TMEM55B-204ENST00000553602 PUS1Q9Y606 427 aaKnown RBP eCLIP4.5□□□□□ -1.69
TMEM55B-204ENST00000553602 LRRC3CA6NJW4 275 aa4.49□□□□□ -1.69
TMEM55B-204ENST00000553602 IFITM10A6NMD0 228 aa4.49□□□□□ -1.69
TMEM55B-204ENST00000553602 KIAA1324LA8MWY0 1029 aaPredicted RBP4.49□□□□□ -1.69
TMEM55B-204ENST00000553602 CDRT15L2A8MXV6 281 aa4.49□□□□□ -1.69
TMEM55B-204ENST00000553602 TMEM250H0YL14 139 aa4.49□□□□□ -1.69
TMEM55B-204ENST00000553602 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP4.49□□□□□ -1.69
TMEM55B-204ENST00000553602 CLDN34H7C241 214 aa4.49□□□□□ -1.69
TMEM55B-204ENST00000553602 K7ESF4 209 aa4.49□□□□□ -1.69
TMEM55B-204ENST00000553602 NTN3O00634 580 aaPredicted RBP4.49□□□□□ -1.69
TMEM55B-204ENST00000553602 PHOX2AO14813 284 aa4.49□□□□□ -1.69
TMEM55B-204ENST00000553602 PPP1R2P9O14990 202 aa4.49□□□□□ -1.69
TMEM55B-204ENST00000553602 ADAM20O43506 726 aa4.49□□□□□ -1.69
TMEM55B-204ENST00000553602 HIST1H2BKO60814 126 aa4.49□□□□□ -1.69
TMEM55B-204ENST00000553602 PGLYRP1O75594 196 aaPredicted RBP4.49□□□□□ -1.69
TMEM55B-204ENST00000553602 KLF7O75840 302 aaPredicted RBP4.49□□□□□ -1.69
TMEM55B-204ENST00000553602 LY86O95711 162 aa4.49□□□□□ -1.69
TMEM55B-204ENST00000553602 PTBP3O95758 552 aaKnown RBP4.49□□□□□ -1.69
TMEM55B-204ENST00000553602 TMEM50AO95807 157 aa4.49□□□□□ -1.69
TMEM55B-204ENST00000553602 OPN1LWP04000 364 aa4.49□□□□□ -1.69
TMEM55B-204ENST00000553602 P04436 131 aa4.49□□□□□ -1.69
TMEM55B-204ENST00000553602 ARG1P05089 322 aa4.49□□□□□ -1.69
TMEM55B-204ENST00000553602 HIST1H2BJP06899 126 aa4.49□□□□□ -1.69
TMEM55B-204ENST00000553602 KLK3P07288 261 aaPredicted RBP4.49□□□□□ -1.69
TMEM55B-204ENST00000553602 OR13C7P0DN81 318 aa4.49□□□□□ -1.69
TMEM55B-204ENST00000553602 B4GALT1P15291 398 aa4.49□□□□□ -1.69
TMEM55B-204ENST00000553602 CBR1P16152 277 aa4.49□□□□□ -1.69
TMEM55B-204ENST00000553602 HIST1H2BOP23527 126 aa4.49□□□□□ -1.69
TMEM55B-204ENST00000553602 HIST1H2BBP33778 126 aa4.49□□□□□ -1.69
TMEM55B-204ENST00000553602 RPS10P46783 165 aaKnown RBP4.49□□□□□ -1.69
TMEM55B-204ENST00000553602 NOVA1P51513 510 aaKnown RBP4.49□□□□□ -1.69
TMEM55B-204ENST00000553602 DYNLT3P51808 116 aa4.49□□□□□ -1.69
TMEM55B-204ENST00000553602 PAX9P55771 341 aa4.49□□□□□ -1.69
TMEM55B-204ENST00000553602 CARD18P57730 90 aa4.49□□□□□ -1.69
TMEM55B-204ENST00000553602 FOXL2P58012 376 aa4.49□□□□□ -1.69
TMEM55B-204ENST00000553602 HIST1H2BDP58876 126 aa4.49□□□□□ -1.69
TMEM55B-204ENST00000553602 ERVFRD-1P60508 538 aa4.49□□□□□ -1.69
TMEM55B-204ENST00000553602 HIST1H2BCP62807 126 aa4.49□□□□□ -1.69
TMEM55B-204ENST00000553602 HBG1P69891 147 aa4.49□□□□□ -1.69
TMEM55B-204ENST00000553602 HBG2P69892 147 aa4.49□□□□□ -1.69
TMEM55B-204ENST00000553602 NKX6-1P78426 367 aaPredicted RBP4.49□□□□□ -1.69
TMEM55B-204ENST00000553602 HERPUD1Q15011 391 aa4.49□□□□□ -1.69
TMEM55B-204ENST00000553602 HIST2H2BEQ16778 126 aa4.49□□□□□ -1.69
TMEM55B-204ENST00000553602 CEACAM16Q2WEN9 425 aa4.49□□□□□ -1.69
TMEM55B-204ENST00000553602 PYY3Q5JQD4 70 aa4.49□□□□□ -1.69
TMEM55B-204ENST00000553602 ACER2Q5QJU3 275 aa4.49□□□□□ -1.69
TMEM55B-204ENST00000553602 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.49□□□□□ -1.69
TMEM55B-204ENST00000553602 FAM90A2PQ658T7 463 aa4.49□□□□□ -1.69
TMEM55B-204ENST00000553602 PCSK4Q6UW60 755 aa4.49□□□□□ -1.69
TMEM55B-204ENST00000553602 MEX3BQ6ZN04 569 aaKnown RBP4.49□□□□□ -1.69
TMEM55B-204ENST00000553602 CYP2G1PQ6ZSU1 146 aa4.49□□□□□ -1.69
TMEM55B-204ENST00000553602 SLC25A26Q70HW3 274 aa4.49□□□□□ -1.69
TMEM55B-204ENST00000553602 MRGPRGQ86SM5 289 aa4.49□□□□□ -1.69
TMEM55B-204ENST00000553602 ZDHHC23Q8IYP9 409 aa4.49□□□□□ -1.69
TMEM55B-204ENST00000553602 DEFB119Q8N690 84 aa4.49□□□□□ -1.69
TMEM55B-204ENST00000553602 CYB561D1Q8N8Q1 229 aa4.49□□□□□ -1.69
TMEM55B-204ENST00000553602 OR5A2Q8NGI9 324 aa4.49□□□□□ -1.69
TMEM55B-204ENST00000553602 OR5R1Q8NH85 324 aa4.49□□□□□ -1.69
TMEM55B-204ENST00000553602 AKR7LQ8NHP1 331 aa4.49□□□□□ -1.69
TMEM55B-204ENST00000553602 FAM216AQ8WUB2 273 aa4.49□□□□□ -1.69
TMEM55B-204ENST00000553602 HIST1H2BHQ93079 126 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms