RNA–Protein interactions for RNA: ENST00000553289.5

SYNE2-208, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2

Gene SYNE2, Length 5,261 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-208ENST00000553289 DOK5Q9P104 306 aa10.08□□□□□ -0.8
SYNE2-208ENST00000553289 TRPM6Q9BX84 2022 aa10.08□□□□□ -0.8
SYNE2-208ENST00000553289 ZNF716A6NP11 495 aa10.08□□□□□ -0.8
SYNE2-208ENST00000553289 SYNGR1O43759 233 aa10.08□□□□□ -0.8
SYNE2-208ENST00000553289 HOXD4P09016 255 aaPredicted RBP10.08□□□□□ -0.8
SYNE2-208ENST00000553289 ZFP36L2P47974 494 aaKnown RBP10.08□□□□□ -0.8
SYNE2-208ENST00000553289 NANOS3P60323 173 aaKnown RBP10.08□□□□□ -0.8
SYNE2-208ENST00000553289 C19orf57Q0VDD7 668 aa10.08□□□□□ -0.8
SYNE2-208ENST00000553289 RIGQ13278 110 aa10.08□□□□□ -0.8
SYNE2-208ENST00000553289 PIGYQ3MUY2 71 aa10.08□□□□□ -0.8
SYNE2-208ENST00000553289 TEX30Q5JUR7 227 aa10.08□□□□□ -0.8
SYNE2-208ENST00000553289 ABHD14BQ96IU4 210 aa10.08□□□□□ -0.8
SYNE2-208ENST00000553289 PGLYRP3Q96LB9 341 aa10.08□□□□□ -0.8
SYNE2-208ENST00000553289 TMEM191AQ9H0A3 160 aa10.08□□□□□ -0.8
SYNE2-208ENST00000553289 KLK13Q9UKR3 277 aa10.08□□□□□ -0.8
SYNE2-208ENST00000553289 VSIG4Q9Y279 399 aa10.08□□□□□ -0.8
SYNE2-208ENST00000553289 C7orf77A4D0Y5 90 aa10.08□□□□□ -0.8
SYNE2-208ENST00000553289 M0R143 59 aa10.08□□□□□ -0.8
SYNE2-208ENST00000553289 ISG15P05161 165 aa10.08□□□□□ -0.8
SYNE2-208ENST00000553289 RPS4XP62701 263 aaKnown RBP10.08□□□□□ -0.8
SYNE2-208ENST00000553289 PSG5Q15238 335 aa10.08□□□□□ -0.8
SYNE2-208ENST00000553289 OR1L8Q8NGR8 309 aa10.08□□□□□ -0.8
SYNE2-208ENST00000553289 DIRC2Q96SL1 478 aa10.08□□□□□ -0.8
SYNE2-208ENST00000553289 TMEM204Q9BSN7 226 aa10.08□□□□□ -0.8
SYNE2-208ENST00000553289 TCAPO15273 167 aa10.07□□□□□ -0.8
SYNE2-208ENST00000553289 GAPDHP04406 335 aaKnown RBP10.07□□□□□ -0.8
SYNE2-208ENST00000553289 EFNB2P52799 333 aa10.07□□□□□ -0.8
SYNE2-208ENST00000553289 DLK1P80370 383 aa10.07□□□□□ -0.8
SYNE2-208ENST00000553289 SERF2P84101 59 aa10.07□□□□□ -0.8
SYNE2-208ENST00000553289 OR4C5Q8NGB2 326 aa10.07□□□□□ -0.8
SYNE2-208ENST00000553289 MRGPRFQ96AM1 343 aa10.07□□□□□ -0.8
SYNE2-208ENST00000553289 MCM3APO60318 1980 aa10.07□□□□□ -0.8
SYNE2-208ENST00000553289 DSPPQ9NZW4 1301 aa10.07□□□□□ -0.8
SYNE2-208ENST00000553289 GNG7O60262 68 aa10.07□□□□□ -0.8
SYNE2-208ENST00000553289 FAM87AP0C7U9 286 aa10.07□□□□□ -0.8
SYNE2-208ENST00000553289 SMIM6P0DI80 62 aa10.07□□□□□ -0.8
SYNE2-208ENST00000553289 ERVS71-1P61550 626 aa10.07□□□□□ -0.8
SYNE2-208ENST00000553289 LSM11P83369 360 aaKnown RBP eCLIP10.07□□□□□ -0.8
SYNE2-208ENST00000553289 TEPPQ6URK8 271 aa10.07□□□□□ -0.8
SYNE2-208ENST00000553289 LYPD8Q6UX82 237 aa10.07□□□□□ -0.8
SYNE2-208ENST00000553289 OR4D10Q8NGI6 311 aa10.07□□□□□ -0.8
SYNE2-208ENST00000553289 OR4P4Q8NGL7 312 aa10.07□□□□□ -0.8
SYNE2-208ENST00000553289 ELF5Q9UKW6 265 aaPredicted RBP10.07□□□□□ -0.8
SYNE2-208ENST00000553289 ZNF831Q5JPB2 1677 aa10.07□□□□□ -0.8
SYNE2-208ENST00000553289 IGKV1-8A0A0C4DH67 115 aa10.07□□□□□ -0.8
SYNE2-208ENST00000553289 FCGR3AP08637 254 aa10.07□□□□□ -0.8
SYNE2-208ENST00000553289 NPY1RP25929 384 aa10.07□□□□□ -0.8
SYNE2-208ENST00000553289 SRSF5Q13243 272 aaKnown RBP10.07□□□□□ -0.8
SYNE2-208ENST00000553289 PRR13Q9NZ81 148 aa10.07□□□□□ -0.8
SYNE2-208ENST00000553289 MRPS18BQ9Y676 258 aaKnown RBP10.07□□□□□ -0.8
SYNE2-208ENST00000553289 CENPVL1A0A0U1RR11 272 aa10.07□□□□□ -0.8
SYNE2-208ENST00000553289 ELOBQ15370 118 aa10.07□□□□□ -0.8
SYNE2-208ENST00000553289 CEACAM21Q3KPI0 293 aa10.07□□□□□ -0.8
SYNE2-208ENST00000553289 CD200R1LQ6Q8B3 271 aa10.07□□□□□ -0.8
SYNE2-208ENST00000553289 H1FOOQ8IZA3 346 aaPredicted RBP10.07□□□□□ -0.8
SYNE2-208ENST00000553289 EIF4E3Q8N5X7 224 aaKnown RBP10.07□□□□□ -0.8
SYNE2-208ENST00000553289 Q8WTZ3 238 aa10.07□□□□□ -0.8
SYNE2-208ENST00000553289 KLHDC2Q9Y2U9 406 aa10.07□□□□□ -0.8
SYNE2-208ENST00000553289 CDX4O14627 284 aaPredicted RBP10.06□□□□□ -0.8
SYNE2-208ENST00000553289 SPINK4O60575 86 aa10.06□□□□□ -0.8
SYNE2-208ENST00000553289 ADAM11O75078 769 aa10.06□□□□□ -0.8
SYNE2-208ENST00000553289 P01737 135 aa10.06□□□□□ -0.8
SYNE2-208ENST00000553289 HLA-DRB5Q30154 266 aa10.06□□□□□ -0.8
SYNE2-208ENST00000553289 C10orf113Q5VZT2 155 aa10.06□□□□□ -0.8
SYNE2-208ENST00000553289 OR5R1Q8NH85 324 aa10.06□□□□□ -0.8
SYNE2-208ENST00000553289 ZNF385AQ96PM9 386 aaKnown RBP10.06□□□□□ -0.8
SYNE2-208ENST00000553289 NPAS1Q99742 590 aa10.06□□□□□ -0.8
SYNE2-208ENST00000553289 ADAMTSL1Q8N6G6 1762 aa10.06□□□□□ -0.8
SYNE2-208ENST00000553289 MED19A0JLT2 244 aaPredicted RBP10.06□□□□□ -0.8
SYNE2-208ENST00000553289 B2MP61769 119 aa10.06□□□□□ -0.8
SYNE2-208ENST00000553289 HIKESHIQ53FT3 197 aa10.06□□□□□ -0.8
SYNE2-208ENST00000553289 LRP11Q86VZ4 500 aa10.06□□□□□ -0.8
SYNE2-208ENST00000553289 ZNF519Q8TB69 540 aa10.06□□□□□ -0.8
SYNE2-208ENST00000553289 MARS2Q96GW9 593 aaKnown RBP10.06□□□□□ -0.8
SYNE2-208ENST00000553289 HARBI1Q96MB7 349 aa10.06□□□□□ -0.8
SYNE2-208ENST00000553289 RASL11BQ9BPW5 248 aa10.06□□□□□ -0.8
SYNE2-208ENST00000553289 TTTY12Q9BZ98 90 aa10.06□□□□□ -0.8
SYNE2-208ENST00000553289 SIRT4Q9Y6E7 314 aaPredicted RBP10.06□□□□□ -0.8
SYNE2-208ENST00000553289 DNASE2O00115 360 aaPredicted RBP10.06□□□□□ -0.8
SYNE2-208ENST00000553289 PRSS12P56730 875 aa10.06□□□□□ -0.8
SYNE2-208ENST00000553289 MDP1Q86V88 176 aa10.06□□□□□ -0.8
SYNE2-208ENST00000553289 ZPLD1Q8TCW7 415 aa10.06□□□□□ -0.8
SYNE2-208ENST00000553289 LRRC3BQ96PB8 259 aa10.06□□□□□ -0.8
SYNE2-208ENST00000553289 CDX2Q99626 313 aaPredicted RBP10.06□□□□□ -0.8
SYNE2-208ENST00000553289 BET1LQ9NYM9 111 aa10.06□□□□□ -0.8
SYNE2-208ENST00000553289 F5H697 171 aa10.06□□□□□ -0.8
SYNE2-208ENST00000553289 ZNF253O75346 499 aa10.06□□□□□ -0.8
SYNE2-208ENST00000553289 HPRT1P00492 218 aa10.06□□□□□ -0.8
SYNE2-208ENST00000553289 FGF12P61328 243 aa10.06□□□□□ -0.8
SYNE2-208ENST00000553289 PMS2CLQ68D20 193 aa10.06□□□□□ -0.8
SYNE2-208ENST00000553289 ADAMTS17Q8TE56 1095 aa10.06□□□□□ -0.8
SYNE2-208ENST00000553289 TXNDC17Q9BRA2 123 aa10.06□□□□□ -0.8
SYNE2-208ENST00000553289 C16orf97H3BN30 126 aa10.06□□□□□ -0.8
SYNE2-208ENST00000553289 H3BQ15 152 aa10.06□□□□□ -0.8
SYNE2-208ENST00000553289 F2RL2O00254 374 aa10.06□□□□□ -0.8
SYNE2-208ENST00000553289 CAMPP49913 170 aa10.06□□□□□ -0.8
SYNE2-208ENST00000553289 MGAT2Q10469 447 aa10.06□□□□□ -0.8
SYNE2-208ENST00000553289 C3AR1Q16581 482 aa10.06□□□□□ -0.8
SYNE2-208ENST00000553289 LBHQ53QV2 105 aaPredicted RBP10.06□□□□□ -0.8
SYNE2-208ENST00000553289 C1orf100Q5SVJ3 147 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms