RNA–Protein interactions for RNA: ENST00000552465.1

CACNB3-222, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, human

TSL 3

Gene CACNB3, Length 557 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNB3-222	ENST00000552465	RTN4IP1	Q8WWV3	396 aa	Predicted RBP	13.11	□□□□□ -0.31
CACNB3-222	ENST00000552465	ST6GALNAC6	Q969X2	333 aa		13.11	□□□□□ -0.31
CACNB3-222	ENST00000552465	OR5B12	Q96R08	314 aa		13.11	□□□□□ -0.31
CACNB3-222	ENST00000552465	TM2D3	Q9BRN9	247 aa		13.11	□□□□□ -0.31
CACNB3-222	ENST00000552465	CHCHD6	Q9BRQ6	235 aa		13.11	□□□□□ -0.31
CACNB3-222	ENST00000552465	THTPA	Q9BU02	230 aa		13.11	□□□□□ -0.31
CACNB3-222	ENST00000552465	ZCCHC4	Q9H5U6	513 aa		13.11	□□□□□ -0.31
CACNB3-222	ENST00000552465	VSIG4	Q9Y279	399 aa		13.11	□□□□□ -0.31
CACNB3-222	ENST00000552465	TRIM64C	A6NLI5	447 aa		13.1	□□□□□ -0.31
CACNB3-222	ENST00000552465	SAP30	O75446	220 aa		13.1	□□□□□ -0.31
CACNB3-222	ENST00000552465	GZMH	P20718	246 aa		13.1	□□□□□ -0.31
CACNB3-222	ENST00000552465	PPIF	P30405	207 aa	Known RBP	13.1	□□□□□ -0.31
CACNB3-222	ENST00000552465	KCNJ3	P48549	501 aa		13.1	□□□□□ -0.31
CACNB3-222	ENST00000552465	TMED1	Q13445	227 aa		13.1	□□□□□ -0.31
CACNB3-222	ENST00000552465	KISS1	Q15726	138 aa		13.1	□□□□□ -0.31
CACNB3-222	ENST00000552465	KCTD20	Q7Z5Y7	419 aa		13.1	□□□□□ -0.31
CACNB3-222	ENST00000552465	C8orf31	Q8N9H6	132 aa		13.1	□□□□□ -0.31
CACNB3-222	ENST00000552465	ISOC1	Q96CN7	298 aa		13.1	□□□□□ -0.31
CACNB3-222	ENST00000552465	RBMXL1	Q96E39	390 aa	Known RBP	13.1	□□□□□ -0.31
CACNB3-222	ENST00000552465	FAM118A	Q9NWS6	357 aa		13.1	□□□□□ -0.31
CACNB3-222	ENST00000552465	NKX1-2	Q9UD57	310 aa	Predicted RBP	13.1	□□□□□ -0.31
CACNB3-222	ENST00000552465	TCRBV3S1	A0A5B6	114 aa		13.09	□□□□□ -0.31
CACNB3-222	ENST00000552465	IL3RA	P26951	378 aa		13.09	□□□□□ -0.31
CACNB3-222	ENST00000552465	CCR9	P51686	369 aa		13.09	□□□□□ -0.31
CACNB3-222	ENST00000552465	IL13RA2	Q14627	380 aa		13.09	□□□□□ -0.31
CACNB3-222	ENST00000552465	ZNF691	Q5VV52	312 aa		13.09	□□□□□ -0.31
CACNB3-222	ENST00000552465	PXT1	Q8NFP0	134 aa		13.09	□□□□□ -0.31
CACNB3-222	ENST00000552465	OR52M1	Q8NGK5	317 aa		13.09	□□□□□ -0.31
CACNB3-222	ENST00000552465	DLX4	Q92988	240 aa	Predicted RBP	13.09	□□□□□ -0.31
CACNB3-222	ENST00000552465	CHCHD3	Q9NX63	227 aa	Known RBP	13.09	□□□□□ -0.31
CACNB3-222	ENST00000552465	ZNF107	Q9UII5	783 aa	Predicted RBP	13.09	□□□□□ -0.31
CACNB3-222	ENST00000552465	SORL1	Q92673	2214 aa		13.09	□□□□□ -0.31
CACNB3-222	ENST00000552465	C15orf65	H3BRN8	121 aa		13.08	□□□□□ -0.32
CACNB3-222	ENST00000552465	SDCBP	O00560	298 aa	Predicted RBP	13.08	□□□□□ -0.32
CACNB3-222	ENST00000552465	LDLRAD4	O15165	306 aa		13.08	□□□□□ -0.32
CACNB3-222	ENST00000552465	IGLV1-40	P01703	118 aa		13.08	□□□□□ -0.32
CACNB3-222	ENST00000552465	HTR1A	P08908	422 aa		13.08	□□□□□ -0.32
CACNB3-222	ENST00000552465	FLOT2	Q14254	428 aa		13.08	□□□□□ -0.32
CACNB3-222	ENST00000552465	ZSCAN26	Q16670	478 aa		13.08	□□□□□ -0.32
CACNB3-222	ENST00000552465	KDM4D	Q6B0I6	523 aa		13.08	□□□□□ -0.32
CACNB3-222	ENST00000552465	EME1	Q96AY2	570 aa		13.08	□□□□□ -0.32
CACNB3-222	ENST00000552465	DPCD	Q9BVM2	203 aa	Predicted RBP	13.08	□□□□□ -0.32
CACNB3-222	ENST00000552465	GFOD1	Q9NXC2	390 aa		13.08	□□□□□ -0.32
CACNB3-222	ENST00000552465	WSB1	Q9Y6I7	421 aa		13.08	□□□□□ -0.32
CACNB3-222	ENST00000552465	OR4C45	A6NMZ5	311 aa		13.07	□□□□□ -0.32
CACNB3-222	ENST00000552465		G3V318	75 aa		13.07	□□□□□ -0.32
CACNB3-222	ENST00000552465	SULT1B1	O43704	296 aa		13.07	□□□□□ -0.32
CACNB3-222	ENST00000552465	VHL	P40337	213 aa		13.07	□□□□□ -0.32
CACNB3-222	ENST00000552465	VEGFC	P49767	419 aa		13.07	□□□□□ -0.32
CACNB3-222	ENST00000552465	RAB9A	P51151	201 aa		13.07	□□□□□ -0.32
CACNB3-222	ENST00000552465	GNGT1	P63211	74 aa		13.07	□□□□□ -0.32
CACNB3-222	ENST00000552465	GABPB1	Q06547	395 aa	Predicted RBP	13.07	□□□□□ -0.32
CACNB3-222	ENST00000552465	GALE	Q14376	348 aa		13.07	□□□□□ -0.32
CACNB3-222	ENST00000552465	PIGY	Q3MUY2	71 aa		13.07	□□□□□ -0.32
CACNB3-222	ENST00000552465	SUMF2	Q8NBJ7	301 aa		13.07	□□□□□ -0.32
CACNB3-222	ENST00000552465	OR5D14	Q8NGL3	314 aa		13.07	□□□□□ -0.32
CACNB3-222	ENST00000552465	OR6Q1	Q8NGQ2	317 aa		13.07	□□□□□ -0.32
CACNB3-222	ENST00000552465	ARL11	Q969Q4	196 aa		13.07	□□□□□ -0.32
CACNB3-222	ENST00000552465	OR51J1	Q9H342	316 aa		13.07	□□□□□ -0.32
CACNB3-222	ENST00000552465	MAGEA13P	A6NCF6	341 aa		13.06	□□□□□ -0.32
CACNB3-222	ENST00000552465	FAM90A10P	A6NDY2	464 aa		13.06	□□□□□ -0.32
CACNB3-222	ENST00000552465		G3V2T6	193 aa		13.06	□□□□□ -0.32
CACNB3-222	ENST00000552465	SLC16A6	O15403	523 aa		13.06	□□□□□ -0.32
CACNB3-222	ENST00000552465	SLC2A2	P11168	524 aa	Predicted RBP	13.06	□□□□□ -0.32
CACNB3-222	ENST00000552465	SERPINA12	Q8IW75	414 aa		13.06	□□□□□ -0.32
CACNB3-222	ENST00000552465	OR8J1	Q8NGP2	316 aa		13.06	□□□□□ -0.32
CACNB3-222	ENST00000552465	OR10K1	Q8NGX5	313 aa		13.06	□□□□□ -0.32
CACNB3-222	ENST00000552465	UBALD1	Q8TB05	177 aa		13.06	□□□□□ -0.32
CACNB3-222	ENST00000552465	RFK	Q969G6	155 aa		13.06	□□□□□ -0.32
CACNB3-222	ENST00000552465	ALX4	Q9H161	411 aa	Predicted RBP	13.06	□□□□□ -0.32
CACNB3-222	ENST00000552465	GHITM	Q9H3K2	345 aa		13.06	□□□□□ -0.32
CACNB3-222	ENST00000552465	ZNF581	Q9P0T4	197 aa		13.06	□□□□□ -0.32
CACNB3-222	ENST00000552465	ENOPH1	Q9UHY7	261 aa		13.06	□□□□□ -0.32
CACNB3-222	ENST00000552465	IGHV3-43	A0A0B4J1X8	118 aa		13.05	□□□□□ -0.32
CACNB3-222	ENST00000552465	DAPL1	A0PJW8	107 aa		13.05	□□□□□ -0.32
CACNB3-222	ENST00000552465	TMEM30CP	A0ZSE6	113 aa		13.05	□□□□□ -0.32
CACNB3-222	ENST00000552465	SLC31A2	O15432	143 aa		13.05	□□□□□ -0.32
CACNB3-222	ENST00000552465	TXNL1	O43396	289 aa		13.05	□□□□□ -0.32
CACNB3-222	ENST00000552465	ORC5	O43913	435 aa		13.05	□□□□□ -0.32
CACNB3-222	ENST00000552465	IGHV3-43D	P0DP04	118 aa		13.05	□□□□□ -0.32
CACNB3-222	ENST00000552465	POLR2I	P36954	125 aa	Known RBP	13.05	□□□□□ -0.32
CACNB3-222	ENST00000552465	ZNF137P	P52743	207 aa		13.05	□□□□□ -0.32
CACNB3-222	ENST00000552465	SLURP1	P55000	103 aa		13.05	□□□□□ -0.32
CACNB3-222	ENST00000552465	ALKBH1	Q13686	389 aa	Known RBP	13.05	□□□□□ -0.32
CACNB3-222	ENST00000552465	RSU1	Q15404	277 aa		13.05	□□□□□ -0.32
CACNB3-222	ENST00000552465	SRSF7	Q16629	238 aa	Known RBP eCLIP	13.05	□□□□□ -0.32
CACNB3-222	ENST00000552465		Q3ZCU0	254 aa		13.05	□□□□□ -0.32
CACNB3-222	ENST00000552465	ACSM6	Q6P461	480 aa		13.05	□□□□□ -0.32
CACNB3-222	ENST00000552465	ASCL4	Q6XD76	172 aa		13.05	□□□□□ -0.32
CACNB3-222	ENST00000552465	SLC25A48	Q6ZT89	311 aa	Known RBP	13.05	□□□□□ -0.32
CACNB3-222	ENST00000552465	PARP16	Q8N5Y8	322 aa		13.05	□□□□□ -0.32
CACNB3-222	ENST00000552465	TNFAIP8L1	Q8WVP5	186 aa		13.05	□□□□□ -0.32
CACNB3-222	ENST00000552465	PELI1	Q96FA3	418 aa		13.05	□□□□□ -0.32
CACNB3-222	ENST00000552465	KRTAP17-1	Q9BYP8	105 aa		13.05	□□□□□ -0.32
CACNB3-222	ENST00000552465	IFT22	Q9H7X7	185 aa		13.05	□□□□□ -0.32
CACNB3-222	ENST00000552465	LYST	Q99698	3801 aa		13.05	□□□□□ -0.32
CACNB3-222	ENST00000552465	TRAV41	A0A0B4J266	112 aa		13.04	□□□□□ -0.32
CACNB3-222	ENST00000552465	LINC01619	G3V211	115 aa		13.04	□□□□□ -0.32
CACNB3-222	ENST00000552465		J3QRE1	110 aa		13.04	□□□□□ -0.32
CACNB3-222	ENST00000552465	GABRP	O00591	440 aa		13.04	□□□□□ -0.32

Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms