RNA–Protein interactions for RNA: ENST00000552440.5

USP44-208, Transcript of ubiquitin specific peptidase 44, humanhuman

TSL 5 BASIC

Gene USP44, Length 1,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-208ENST00000552440 PPP1R2P1Q96PQ5 205 aa3.24□□□□□ -1.89
USP44-208ENST00000552440 CCDC90BQ9GZT6 254 aa3.24□□□□□ -1.89
USP44-208ENST00000552440 CISHQ9NSE2 258 aa3.24□□□□□ -1.89
USP44-208ENST00000552440 MRPL27Q9P0M9 148 aaKnown RBP3.24□□□□□ -1.89
USP44-208ENST00000552440 CLCF1Q9UBD9 225 aa3.24□□□□□ -1.89
USP44-208ENST00000552440 UGT2A1Q9Y4X1 527 aa3.24□□□□□ -1.89
USP44-208ENST00000552440 YTHDF2Q9Y5A9 579 aaKnown RBP3.24□□□□□ -1.89
USP44-208ENST00000552440 WSB1Q9Y6I7 421 aa3.24□□□□□ -1.89
USP44-208ENST00000552440 ASTN1O14525 1302 aa3.24□□□□□ -1.89
USP44-208ENST00000552440 KDM5AP29375 1690 aaKnown RBP3.24□□□□□ -1.89
USP44-208ENST00000552440 CAMTA1Q9Y6Y1 1673 aa3.24□□□□□ -1.89
USP44-208ENST00000552440 ERVK-7P63135 1459 aa3.24□□□□□ -1.89
USP44-208ENST00000552440 CAMSAP2Q08AD1 1489 aa3.24□□□□□ -1.89
USP44-208ENST00000552440 A0A1W2PRE2 83 aa3.23□□□□□ -1.89
USP44-208ENST00000552440 PRAC2D3DTV9 90 aa3.23□□□□□ -1.89
USP44-208ENST00000552440 TMX2-CTNND1H3BSU7 103 aa3.23□□□□□ -1.89
USP44-208ENST00000552440 MYL12BO14950 172 aa3.23□□□□□ -1.89
USP44-208ENST00000552440 GCM2O75603 506 aaPredicted RBP3.23□□□□□ -1.89
USP44-208ENST00000552440 ATP5G1P05496 136 aa3.23□□□□□ -1.89
USP44-208ENST00000552440 CSF3P09919 207 aa3.23□□□□□ -1.89
USP44-208ENST00000552440 OR4A8P0C604 315 aa3.23□□□□□ -1.89
USP44-208ENST00000552440 OR8U8P0C7N1 319 aa3.23□□□□□ -1.89
USP44-208ENST00000552440 OR56A5P0C7T3 313 aa3.23□□□□□ -1.89
USP44-208ENST00000552440 COX4I1P13073 169 aa3.23□□□□□ -1.89
USP44-208ENST00000552440 GPX2P18283 190 aa3.23□□□□□ -1.89
USP44-208ENST00000552440 SDC4P31431 198 aa3.23□□□□□ -1.89
USP44-208ENST00000552440 FMO3P31513 532 aa3.23□□□□□ -1.89
USP44-208ENST00000552440 CD70P32970 193 aa3.23□□□□□ -1.89
USP44-208ENST00000552440 CDKN2BP42772 138 aa3.23□□□□□ -1.89
USP44-208ENST00000552440 MARCKSL1P49006 195 aa3.23□□□□□ -1.89
USP44-208ENST00000552440 NDUFV3P56181 108 aaKnown RBP3.23□□□□□ -1.89
USP44-208ENST00000552440 TPI1P60174 286 aa3.23□□□□□ -1.89
USP44-208ENST00000552440 FZD2Q14332 565 aa3.23□□□□□ -1.89
USP44-208ENST00000552440 ZNF146Q15072 292 aa3.23□□□□□ -1.89
USP44-208ENST00000552440 KDM4DQ6B0I6 523 aa3.23□□□□□ -1.89
USP44-208ENST00000552440 DCUN1D2Q6PH85 259 aa3.23□□□□□ -1.89
USP44-208ENST00000552440 CXCL17Q6UXB2 119 aa3.23□□□□□ -1.89
USP44-208ENST00000552440 CLEC19AQ6UXS0 136 aa3.23□□□□□ -1.89
USP44-208ENST00000552440 GSG1LQ6UXU4 331 aa3.23□□□□□ -1.89
USP44-208ENST00000552440 TEX43Q6ZNM6 134 aa3.23□□□□□ -1.89
USP44-208ENST00000552440 C3orf62Q6ZUJ4 267 aa3.23□□□□□ -1.89
USP44-208ENST00000552440 ZNF550Q7Z398 422 aa3.23□□□□□ -1.89
USP44-208ENST00000552440 TGIF2LYQ8IUE0 185 aa3.23□□□□□ -1.89
USP44-208ENST00000552440 SLC22A18ASQ8N1D0 253 aa3.23□□□□□ -1.89
USP44-208ENST00000552440 RFLNBQ8N5W9 214 aa3.23□□□□□ -1.89
USP44-208ENST00000552440 OR4M1Q8NGD0 313 aa3.23□□□□□ -1.89
USP44-208ENST00000552440 OR13A1Q8NGR1 328 aa3.23□□□□□ -1.89
USP44-208ENST00000552440 ZNRF2Q8NHG8 242 aa3.23□□□□□ -1.89
USP44-208ENST00000552440 NEUROG1Q92886 237 aa3.23□□□□□ -1.89
USP44-208ENST00000552440 EXOSC8Q96B26 276 aaKnown RBP3.23□□□□□ -1.89
USP44-208ENST00000552440 TM4SF18Q96CE8 201 aa3.23□□□□□ -1.89
USP44-208ENST00000552440 L3HYPDHQ96EM0 354 aa3.23□□□□□ -1.89
USP44-208ENST00000552440 ATXN7L3BQ96GX2 97 aa3.23□□□□□ -1.89
USP44-208ENST00000552440 BMFQ96LC9 184 aa3.23□□□□□ -1.89
USP44-208ENST00000552440 DNAJC30Q96LL9 226 aa3.23□□□□□ -1.89
USP44-208ENST00000552440 FOPNLQ96NB1 174 aa3.23□□□□□ -1.89
USP44-208ENST00000552440 C12orf57Q99622 126 aa3.23□□□□□ -1.89
USP44-208ENST00000552440 RSPO3Q9BXY4 272 aaPredicted RBP3.23□□□□□ -1.89
USP44-208ENST00000552440 ULBP3Q9BZM4 244 aa3.23□□□□□ -1.89
USP44-208ENST00000552440 OR51I2Q9H344 312 aa3.23□□□□□ -1.89
USP44-208ENST00000552440 FAM96AQ9H5X1 160 aa3.23□□□□□ -1.89
USP44-208ENST00000552440 SPHK2Q9NRA0 654 aa3.23□□□□□ -1.89
USP44-208ENST00000552440 NEU3Q9UQ49 428 aa3.23□□□□□ -1.89
USP44-208ENST00000552440 ZNF780BQ9Y6R6 833 aa3.23□□□□□ -1.89
USP44-208ENST00000552440 SPHKAPQ2M3C7 1700 aa3.23□□□□□ -1.89
USP44-208ENST00000552440 FMN1Q68DA7 1419 aa3.23□□□□□ -1.89
USP44-208ENST00000552440 ASXL1Q8IXJ9 1541 aa3.23□□□□□ -1.89
USP44-208ENST00000552440 INO80Q9ULG1 1556 aaPredicted RBP3.23□□□□□ -1.89
USP44-208ENST00000552440 MAST1Q9Y2H9 1570 aa3.23□□□□□ -1.89
USP44-208ENST00000552440 FAM183AA6NL82 134 aa3.23□□□□□ -1.89
USP44-208ENST00000552440 LAMP1P11279 417 aa3.23□□□□□ -1.89
USP44-208ENST00000552440 CD1EP15812 388 aa3.23□□□□□ -1.89
USP44-208ENST00000552440 RAB3BP20337 219 aa3.23□□□□□ -1.89
USP44-208ENST00000552440 CKS1BP61024 79 aa3.23□□□□□ -1.89
USP44-208ENST00000552440 HPCAP84074 193 aa3.23□□□□□ -1.89
USP44-208ENST00000552440 CYCSP99999 105 aaKnown RBP3.23□□□□□ -1.89
USP44-208ENST00000552440 CD47Q08722 323 aa3.23□□□□□ -1.89
USP44-208ENST00000552440 TCP10Q12799 353 aa3.23□□□□□ -1.89
USP44-208ENST00000552440 SIX1Q15475 284 aaPredicted RBP3.23□□□□□ -1.89
USP44-208ENST00000552440 BATFQ16520 125 aa3.23□□□□□ -1.89
USP44-208ENST00000552440 IAH1Q2TAA2 248 aaPredicted RBP3.23□□□□□ -1.89
USP44-208ENST00000552440 TCTEX1D4Q5JR98 221 aa3.23□□□□□ -1.89
USP44-208ENST00000552440 HENMT1Q5T8I9 393 aaKnown RBP3.23□□□□□ -1.89
USP44-208ENST00000552440 NANOGP8Q6NSW7 305 aa3.23□□□□□ -1.89
USP44-208ENST00000552440 FBXL22Q6P050 247 aa3.23□□□□□ -1.89
USP44-208ENST00000552440 LPCAT3Q6P1A2 487 aa3.23□□□□□ -1.89
USP44-208ENST00000552440 GDPGP1Q6ZNW5 385 aa3.23□□□□□ -1.89
USP44-208ENST00000552440 TMPPEQ6ZT21 453 aa3.23□□□□□ -1.89
USP44-208ENST00000552440 DOLPP1Q86YN1 238 aa3.23□□□□□ -1.89
USP44-208ENST00000552440 ZCCHC24Q8N2G6 241 aaKnown RBP3.23□□□□□ -1.89
USP44-208ENST00000552440 OSR2Q8N2R0 312 aa3.23□□□□□ -1.89
USP44-208ENST00000552440 C4orf32Q8N8J7 132 aa3.23□□□□□ -1.89
USP44-208ENST00000552440 OR11H7Q8NGC8 314 aa3.23□□□□□ -1.89
USP44-208ENST00000552440 GEMIN6Q8WXD5 167 aaKnown RBP3.23□□□□□ -1.89
USP44-208ENST00000552440 AURKBQ96GD4 344 aaPredicted RBP3.23□□□□□ -1.89
USP44-208ENST00000552440 GPER1Q99527 375 aa3.23□□□□□ -1.89
USP44-208ENST00000552440 EBPLQ9BY08 206 aa3.23□□□□□ -1.89
USP44-208ENST00000552440 DEFB127Q9H1M4 99 aa3.23□□□□□ -1.89
USP44-208ENST00000552440 NANOGQ9H9S0 305 aa3.23□□□□□ -1.89
USP44-208ENST00000552440 HEBP1Q9NRV9 189 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms