RNA–Protein interactions for RNA: ENST00000552199.5

RAB3IP-216, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best)

Gene RAB3IP, Length 1,905 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-216ENST00000552199 CEACAM8P31997 349 aaPredicted RBP11.84□□□□□ -0.51
RAB3IP-216ENST00000552199 TIMM23BQ5SRD1 257 aa11.84□□□□□ -0.51
RAB3IP-216ENST00000552199 CMTM1Q8IZ96 169 aa11.84□□□□□ -0.51
RAB3IP-216ENST00000552199 SELENOHQ8IZQ5 122 aaKnown RBP11.84□□□□□ -0.51
RAB3IP-216ENST00000552199 OR52M1Q8NGK5 317 aa11.84□□□□□ -0.51
RAB3IP-216ENST00000552199 FAM57AQ8TBR7 257 aa11.84□□□□□ -0.51
RAB3IP-216ENST00000552199 DNTTIP1Q9H147 329 aa11.84□□□□□ -0.51
RAB3IP-216ENST00000552199 HEATR1Q9H583 2144 aaKnown RBP11.84□□□□□ -0.51
RAB3IP-216ENST00000552199 MSL2Q9HCI7 577 aa11.84□□□□□ -0.51
RAB3IP-216ENST00000552199 TRAPPC2LQ9UL33 140 aa11.84□□□□□ -0.51
RAB3IP-216ENST00000552199 NSG2Q9Y328 171 aa11.84□□□□□ -0.51
RAB3IP-216ENST00000552199 WIPI2Q9Y4P8 454 aa11.84□□□□□ -0.51
RAB3IP-216ENST00000552199 TRAV39A0A0B4J263 110 aa11.84□□□□□ -0.51
RAB3IP-216ENST00000552199 WNT9BO14905 357 aa11.84□□□□□ -0.51
RAB3IP-216ENST00000552199 FGF16O43320 207 aa11.84□□□□□ -0.51
RAB3IP-216ENST00000552199 HOXD4P09016 255 aaPredicted RBP11.84□□□□□ -0.51
RAB3IP-216ENST00000552199 ZP3P21754 424 aa11.84□□□□□ -0.51
RAB3IP-216ENST00000552199 LMO1P25800 156 aa11.84□□□□□ -0.51
RAB3IP-216ENST00000552199 ZNF83P51522 516 aa11.84□□□□□ -0.51
RAB3IP-216ENST00000552199 PRAMEF6Q5VXH4 476 aa11.84□□□□□ -0.51
RAB3IP-216ENST00000552199 FAM180AQ6UWF9 173 aa11.84□□□□□ -0.51
RAB3IP-216ENST00000552199 ZNF695Q8IW36 515 aa11.84□□□□□ -0.51
RAB3IP-216ENST00000552199 OR4D5Q8NGN0 318 aa11.84□□□□□ -0.51
RAB3IP-216ENST00000552199 S100PBPQ96BU1 408 aa11.84□□□□□ -0.51
RAB3IP-216ENST00000552199 GPHA2Q96T91 129 aa11.84□□□□□ -0.51
RAB3IP-216ENST00000552199 SFXN3Q9BWM7 321 aa11.84□□□□□ -0.51
RAB3IP-216ENST00000552199 MBNL3Q9NUK0 354 aaKnown RBP11.84□□□□□ -0.51
RAB3IP-216ENST00000552199 TAAR3PQ9P1P4 343 aa11.84□□□□□ -0.51
RAB3IP-216ENST00000552199 OR1A1Q9P1Q5 309 aa11.84□□□□□ -0.51
RAB3IP-216ENST00000552199 OR14J1Q9UGF5 321 aa11.84□□□□□ -0.51
RAB3IP-216ENST00000552199 GLS2Q9UI32 602 aa11.84□□□□□ -0.51
RAB3IP-216ENST00000552199 ERRFI1Q9UJM3 462 aaPredicted RBP11.84□□□□□ -0.51
RAB3IP-216ENST00000552199 NKX2-6A6NCS4 301 aa11.83□□□□□ -0.52
RAB3IP-216ENST00000552199 A6NLC8 198 aa11.83□□□□□ -0.52
RAB3IP-216ENST00000552199 PGLYRP1O75594 196 aaPredicted RBP11.83□□□□□ -0.52
RAB3IP-216ENST00000552199 CDS2O95674 445 aa11.83□□□□□ -0.52
RAB3IP-216ENST00000552199 UCP1P25874 307 aa11.83□□□□□ -0.52
RAB3IP-216ENST00000552199 CEBPDP49716 269 aaPredicted RBP11.83□□□□□ -0.52
RAB3IP-216ENST00000552199 EIF5AP63241 154 aaKnown RBP11.83□□□□□ -0.52
RAB3IP-216ENST00000552199 WDR82Q6UXN9 313 aa11.83□□□□□ -0.52
RAB3IP-216ENST00000552199 ACP7Q6ZNF0 438 aa11.83□□□□□ -0.52
RAB3IP-216ENST00000552199 GALNT11Q8NCW6 608 aa11.83□□□□□ -0.52
RAB3IP-216ENST00000552199 LILRB1Q8NHL6 650 aaPredicted RBP11.83□□□□□ -0.52
RAB3IP-216ENST00000552199 IL1F10Q8WWZ1 152 aa11.83□□□□□ -0.52
RAB3IP-216ENST00000552199 ABHD17AQ96GS6 310 aa11.83□□□□□ -0.52
RAB3IP-216ENST00000552199 LINC00052Q96N35 136 aa11.83□□□□□ -0.52
RAB3IP-216ENST00000552199 OR2S2Q9NQN1 319 aa11.83□□□□□ -0.52
RAB3IP-216ENST00000552199 SPENQ96T58 3664 aaKnown RBP11.83□□□□□ -0.52
RAB3IP-216ENST00000552199 DUXBA0A1W2PPF3 345 aa11.82□□□□□ -0.52
RAB3IP-216ENST00000552199 KRBOX1C9JBD0 128 aa11.82□□□□□ -0.52
RAB3IP-216ENST00000552199 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.82□□□□□ -0.52
RAB3IP-216ENST00000552199 M0R1B8 84 aa11.82□□□□□ -0.52
RAB3IP-216ENST00000552199 LGALS8O00214 317 aa11.82□□□□□ -0.52
RAB3IP-216ENST00000552199 ARID1AO14497 2285 aa11.82□□□□□ -0.52
RAB3IP-216ENST00000552199 ST8SIA3O43173 380 aa11.82□□□□□ -0.52
RAB3IP-216ENST00000552199 S100GP29377 79 aa11.82□□□□□ -0.52
RAB3IP-216ENST00000552199 FOXC1Q12948 553 aa11.82□□□□□ -0.52
RAB3IP-216ENST00000552199 C3orf36Q3SXR2 165 aa11.82□□□□□ -0.52
RAB3IP-216ENST00000552199 RPL7L1Q6DKI1 246 aaKnown RBP11.82□□□□□ -0.52
RAB3IP-216ENST00000552199 OR10V1Q8NGI7 309 aa11.82□□□□□ -0.52
RAB3IP-216ENST00000552199 TMED6Q8WW62 240 aa11.82□□□□□ -0.52
RAB3IP-216ENST00000552199 PTPRZ1P23471 2315 aaPredicted RBP11.82□□□□□ -0.52
RAB3IP-216ENST00000552199 H0Y980 276 aa11.82□□□□□ -0.52
RAB3IP-216ENST00000552199 PSPNO60542 156 aa11.82□□□□□ -0.52
RAB3IP-216ENST00000552199 MZT1Q08AG7 82 aa11.82□□□□□ -0.52
RAB3IP-216ENST00000552199 TESK1Q15569 626 aa11.82□□□□□ -0.52
RAB3IP-216ENST00000552199 HMGN3Q15651 99 aa11.82□□□□□ -0.52
RAB3IP-216ENST00000552199 MSMPQ1L6U9 139 aa11.82□□□□□ -0.52
RAB3IP-216ENST00000552199 OR5D13Q8NGL4 314 aa11.82□□□□□ -0.52
RAB3IP-216ENST00000552199 PRR7Q8TB68 274 aa11.82□□□□□ -0.52
RAB3IP-216ENST00000552199 RNF141Q8WVD5 230 aa11.82□□□□□ -0.52
RAB3IP-216ENST00000552199 UFSP2Q9NUQ7 469 aa11.82□□□□□ -0.52
RAB3IP-216ENST00000552199 FBXL17Q9UF56 701 aa11.82□□□□□ -0.52
RAB3IP-216ENST00000552199 POMT1Q9Y6A1 747 aa11.82□□□□□ -0.52
RAB3IP-216ENST00000552199 TNFSF12O43508 249 aa11.81□□□□□ -0.52
RAB3IP-216ENST00000552199 GPR137BO60478 399 aa11.81□□□□□ -0.52
RAB3IP-216ENST00000552199 FAM157CP0CG43 387 aa11.81□□□□□ -0.52
RAB3IP-216ENST00000552199 F2RP25116 425 aa11.81□□□□□ -0.52
RAB3IP-216ENST00000552199 P2RY1P47900 373 aa11.81□□□□□ -0.52
RAB3IP-216ENST00000552199 TMEM33P57088 247 aa11.81□□□□□ -0.52
RAB3IP-216ENST00000552199 GPR157Q5UAW9 335 aa11.81□□□□□ -0.52
RAB3IP-216ENST00000552199 SLC35E4Q6ICL7 350 aa11.81□□□□□ -0.52
RAB3IP-216ENST00000552199 ALKBH2Q6NS38 261 aa11.81□□□□□ -0.52
RAB3IP-216ENST00000552199 PRR18Q8N4B5 295 aa11.81□□□□□ -0.52
RAB3IP-216ENST00000552199 DMBX1Q8NFW5 382 aa11.81□□□□□ -0.52
RAB3IP-216ENST00000552199 IL22RA2Q969J5 263 aa11.81□□□□□ -0.52
RAB3IP-216ENST00000552199 MUCL1Q96DR8 90 aa11.81□□□□□ -0.52
RAB3IP-216ENST00000552199 SPIN2AQ99865 258 aa11.81□□□□□ -0.52
RAB3IP-216ENST00000552199 SPIN2BQ9BPZ2 258 aa11.81□□□□□ -0.52
RAB3IP-216ENST00000552199 TAF9BQ9HBM6 251 aa11.81□□□□□ -0.52
RAB3IP-216ENST00000552199 TAS2R3Q9NYW6 316 aa11.81□□□□□ -0.52
RAB3IP-216ENST00000552199 TP53TG5Q9Y2B4 290 aa11.81□□□□□ -0.52
RAB3IP-216ENST00000552199 RCL1Q9Y2P8 373 aaKnown RBP11.81□□□□□ -0.52
RAB3IP-216ENST00000552199 TMEM30CPA0ZSE6 113 aa11.8□□□□□ -0.52
RAB3IP-216ENST00000552199 CRYZL1O95825 349 aa11.8□□□□□ -0.52
RAB3IP-216ENST00000552199 GAPDHP04406 335 aaKnown RBP11.8□□□□□ -0.52
RAB3IP-216ENST00000552199 HEXAP06865 529 aa11.8□□□□□ -0.52
RAB3IP-216ENST00000552199 WNT2P09544 360 aa11.8□□□□□ -0.52
RAB3IP-216ENST00000552199 HOXA4Q00056 320 aaPredicted RBP11.8□□□□□ -0.52
RAB3IP-216ENST00000552199 LRP11Q86VZ4 500 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms