RNA–Protein interactions for RNA: ENST00000551623.1

PTCH1-223, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 366 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-223ENST00000551623 MBOAT4Q96T53 435 aa1.63□□□□□ -2.15
PTCH1-223ENST00000551623 S1PR3Q99500 378 aa1.63□□□□□ -2.15
PTCH1-223ENST00000551623 PAPOLGQ9BWT3 736 aaKnown RBP1.63□□□□□ -2.15
PTCH1-223ENST00000551623 PARD6BQ9BYG5 372 aa1.63□□□□□ -2.15
PTCH1-223ENST00000551623 RAB17Q9H0T7 212 aa1.63□□□□□ -2.15
PTCH1-223ENST00000551623 ALX4Q9H161 411 aaPredicted RBP1.63□□□□□ -2.15
PTCH1-223ENST00000551623 WFDC10AQ9H1F0 79 aa1.63□□□□□ -2.15
PTCH1-223ENST00000551623 GAL3ST2Q9H3Q3 398 aa1.63□□□□□ -2.15
PTCH1-223ENST00000551623 NCOR1P1Q9H4R4 102 aa1.63□□□□□ -2.15
PTCH1-223ENST00000551623 SLA2Q9H6Q3 261 aa1.63□□□□□ -2.15
PTCH1-223ENST00000551623 VIPAS39Q9H9C1 493 aa1.63□□□□□ -2.15
PTCH1-223ENST00000551623 SLC25A19Q9HC21 320 aa1.63□□□□□ -2.15
PTCH1-223ENST00000551623 RANGRFQ9HD47 186 aaPredicted RBP1.63□□□□□ -2.15
PTCH1-223ENST00000551623 SDR39U1Q9NRG7 319 aaPredicted RBP1.63□□□□□ -2.15
PTCH1-223ENST00000551623 MRPL22Q9NWU5 206 aaKnown RBP1.63□□□□□ -2.15
PTCH1-223ENST00000551623 SLC2A8Q9NY64 477 aa1.63□□□□□ -2.15
PTCH1-223ENST00000551623 SLC25A37Q9NYZ2 338 aa1.63□□□□□ -2.15
PTCH1-223ENST00000551623 NDUFAF4Q9P032 175 aa1.63□□□□□ -2.15
PTCH1-223ENST00000551623 GRHPRQ9UBQ7 328 aa1.63□□□□□ -2.15
PTCH1-223ENST00000551623 RPS6KA6Q9UK32 745 aa1.63□□□□□ -2.15
PTCH1-223ENST00000551623 POLDIP2Q9Y2S7 368 aa1.63□□□□□ -2.15
PTCH1-223ENST00000551623 PPP2R2CQ9Y2T4 447 aa1.63□□□□□ -2.15
PTCH1-223ENST00000551623 KLHDC2Q9Y2U9 406 aa1.63□□□□□ -2.15
PTCH1-223ENST00000551623 MED31Q9Y3C7 131 aa1.63□□□□□ -2.15
PTCH1-223ENST00000551623 AMMECR1Q9Y4X0 333 aaPredicted RBP1.63□□□□□ -2.15
PTCH1-223ENST00000551623 VPS13DQ5THJ4 4388 aa1.62□□□□□ -2.15
PTCH1-223ENST00000551623 A0A087WUV0 522 aaPredicted RBP1.62□□□□□ -2.15
PTCH1-223ENST00000551623 IGHV7-81A0A0B4J1V7 117 aa1.62□□□□□ -2.15
PTCH1-223ENST00000551623 TRAV10A0A0B4J240 114 aa1.62□□□□□ -2.15
PTCH1-223ENST00000551623 TRAV41A0A0B4J266 112 aa1.62□□□□□ -2.15
PTCH1-223ENST00000551623 IGHV1-3A0A0C4DH29 117 aa1.62□□□□□ -2.15
PTCH1-223ENST00000551623 A0A0U1RQV5 110 aa1.62□□□□□ -2.15
PTCH1-223ENST00000551623 PQLC2LA1A4F0 135 aa1.62□□□□□ -2.15
PTCH1-223ENST00000551623 FAM183AA6NL82 134 aa1.62□□□□□ -2.15
PTCH1-223ENST00000551623 CPSF4LA6NMK7 179 aaKnown RBP1.62□□□□□ -2.15
PTCH1-223ENST00000551623 ZNF729A6NN14 1252 aaPredicted RBP1.62□□□□□ -2.15
PTCH1-223ENST00000551623 IGLL5B9A064 214 aa1.62□□□□□ -2.15
PTCH1-223ENST00000551623 C5orf58C9J3I9 102 aa1.62□□□□□ -2.15
PTCH1-223ENST00000551623 ZNF878C9JN71 531 aa1.62□□□□□ -2.15
PTCH1-223ENST00000551623 LOC110117498-PIK3R3F6TDL0 507 aa1.62□□□□□ -2.15
PTCH1-223ENST00000551623 H3BUA1 57 aa1.62□□□□□ -2.15
PTCH1-223ENST00000551623 J3QR06 171 aa1.62□□□□□ -2.15
PTCH1-223ENST00000551623 XKRYO14609 159 aa1.62□□□□□ -2.15
PTCH1-223ENST00000551623 CDC42EP2O14613 210 aa1.62□□□□□ -2.15
PTCH1-223ENST00000551623 ATP6V0E1O15342 81 aa1.62□□□□□ -2.15
PTCH1-223ENST00000551623 TXNL1O43396 289 aa1.62□□□□□ -2.15
PTCH1-223ENST00000551623 NDUFA3O95167 84 aa1.62□□□□□ -2.15
PTCH1-223ENST00000551623 MOSP00540 346 aa1.62□□□□□ -2.15
PTCH1-223ENST00000551623 OXTP01178 125 aa1.62□□□□□ -2.15
PTCH1-223ENST00000551623 IGLV3-1P01715 115 aa1.62□□□□□ -2.15
PTCH1-223ENST00000551623 APOC1P02654 83 aa1.62□□□□□ -2.15
PTCH1-223ENST00000551623 PIPP12273 146 aaPredicted RBP1.62□□□□□ -2.15
PTCH1-223ENST00000551623 ATP6V1B1P15313 513 aa1.62□□□□□ -2.15
PTCH1-223ENST00000551623 CTRB1P17538 263 aa1.62□□□□□ -2.15
PTCH1-223ENST00000551623 CDK2P24941 298 aa1.62□□□□□ -2.15
PTCH1-223ENST00000551623 VHLP40337 213 aa1.62□□□□□ -2.15
PTCH1-223ENST00000551623 ALDH3A2P51648 485 aa1.62□□□□□ -2.15
PTCH1-223ENST00000551623 SLC7A2P52569 658 aa1.62□□□□□ -2.15
PTCH1-223ENST00000551623 CAPZA1P52907 286 aa1.62□□□□□ -2.15
PTCH1-223ENST00000551623 FXYD6P3P58550 94 aa1.62□□□□□ -2.15
PTCH1-223ENST00000551623 CDC42P60953 191 aa1.62□□□□□ -2.15
PTCH1-223ENST00000551623 UFM1P61960 85 aa1.62□□□□□ -2.15
PTCH1-223ENST00000551623 PRKCDQ05655 676 aa1.62□□□□□ -2.15
PTCH1-223ENST00000551623 IL24Q13007 206 aa1.62□□□□□ -2.15
PTCH1-223ENST00000551623 KRR1Q13601 381 aaKnown RBP1.62□□□□□ -2.15
PTCH1-223ENST00000551623 SCARB2Q14108 478 aa1.62□□□□□ -2.15
PTCH1-223ENST00000551623 EIF2B1Q14232 305 aaKnown RBP1.62□□□□□ -2.15
PTCH1-223ENST00000551623 ZNF146Q15072 292 aa1.62□□□□□ -2.15
PTCH1-223ENST00000551623 DEFB135Q30KP9 77 aa1.62□□□□□ -2.15
PTCH1-223ENST00000551623 DEFB114Q30KQ6 69 aa1.62□□□□□ -2.15
PTCH1-223ENST00000551623 Q3ZCU0 254 aa1.62□□□□□ -2.15
PTCH1-223ENST00000551623 GTDC1Q4AE62 458 aa1.62□□□□□ -2.15
PTCH1-223ENST00000551623 AKIRIN2Q53H80 203 aa1.62□□□□□ -2.15
PTCH1-223ENST00000551623 UTF1Q5T230 341 aa1.62□□□□□ -2.15
PTCH1-223ENST00000551623 OTPQ5XKR4 325 aa1.62□□□□□ -2.15
PTCH1-223ENST00000551623 TMEM42Q69YG0 159 aa1.62□□□□□ -2.15
PTCH1-223ENST00000551623 CTRB2Q6GPI1 263 aa1.62□□□□□ -2.15
PTCH1-223ENST00000551623 Q6ZSR3 168 aa1.62□□□□□ -2.15
PTCH1-223ENST00000551623 SLC16A13Q7RTY0 426 aa1.62□□□□□ -2.15
PTCH1-223ENST00000551623 NOTCH2NLQ7Z3S9 236 aa1.62□□□□□ -2.15
PTCH1-223ENST00000551623 ANGPTL5Q86XS5 388 aa1.62□□□□□ -2.15
PTCH1-223ENST00000551623 RBM45Q8IUH3 476 aaKnown RBP1.62□□□□□ -2.15
PTCH1-223ENST00000551623 RNF113BQ8IZP6 322 aaKnown RBP1.62□□□□□ -2.15
PTCH1-223ENST00000551623 OR6V1Q8N148 313 aa1.62□□□□□ -2.15
PTCH1-223ENST00000551623 SLC35F6Q8N357 371 aa1.62□□□□□ -2.15
PTCH1-223ENST00000551623 YIPF7Q8N8F6 280 aa1.62□□□□□ -2.15
PTCH1-223ENST00000551623 EIF1ADQ8N9N8 165 aaKnown RBP1.62□□□□□ -2.15
PTCH1-223ENST00000551623 C11orf65Q8NCR3 313 aa1.62□□□□□ -2.15
PTCH1-223ENST00000551623 SPATA4Q8NEY3 305 aa1.62□□□□□ -2.15
PTCH1-223ENST00000551623 OR10A7Q8NGE5 316 aa1.62□□□□□ -2.15
PTCH1-223ENST00000551623 UBALD1Q8TB05 177 aa1.62□□□□□ -2.15
PTCH1-223ENST00000551623 RPEQ96AT9 228 aa1.62□□□□□ -2.15
PTCH1-223ENST00000551623 REEP6Q96HR9 211 aa1.62□□□□□ -2.15
PTCH1-223ENST00000551623 RNF170Q96K19 258 aa1.62□□□□□ -2.15
PTCH1-223ENST00000551623 FAM210BQ96KR6 192 aa1.62□□□□□ -2.15
PTCH1-223ENST00000551623 C17orf77Q96MU5 243 aa1.62□□□□□ -2.15
PTCH1-223ENST00000551623 ZNF570Q96NI8 536 aa1.62□□□□□ -2.15
PTCH1-223ENST00000551623 SPACA5Q96QH8 159 aa1.62□□□□□ -2.15
PTCH1-223ENST00000551623 OR5B12Q96R08 314 aa1.62□□□□□ -2.15
PTCH1-223ENST00000551623 BARHL1Q9BZE3 327 aa1.62□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms