RNA–Protein interactions for RNA: ENST00000551165.5

SSH1-209, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SSH1, Length 2,354 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-209ENST00000551165 DNAJB11Q9UBS4 358 aa16.5■□□□□ 0.23
SSH1-209ENST00000551165 TSC22D2O75157 780 aa16.5■□□□□ 0.23
SSH1-209ENST00000551165 GATA4P43694 442 aa16.5■□□□□ 0.23
SSH1-209ENST00000551165 GLIPR1P48060 266 aa16.5■□□□□ 0.23
SSH1-209ENST00000551165 LRRC37A5PQ49AS3 106 aa16.5■□□□□ 0.23
SSH1-209ENST00000551165 OR4A4PQ8NGN8 299 aa16.5■□□□□ 0.23
SSH1-209ENST00000551165 RTN4IP1Q8WWV3 396 aaPredicted RBP16.5■□□□□ 0.23
SSH1-209ENST00000551165 DCTN5Q9BTE1 182 aa16.5■□□□□ 0.23
SSH1-209ENST00000551165 PDCD10Q9BUL8 212 aa16.5■□□□□ 0.23
SSH1-209ENST00000551165 RSRP1Q9BUV0 290 aa16.5■□□□□ 0.23
SSH1-209ENST00000551165 PARP12Q9H0J9 701 aaKnown RBP16.5■□□□□ 0.23
SSH1-209ENST00000551165 TAF9BQ9HBM6 251 aa16.5■□□□□ 0.23
SSH1-209ENST00000551165 NGBQ9NPG2 151 aa16.5■□□□□ 0.23
SSH1-209ENST00000551165 ANKHD1Q8IWZ3 2542 aaKnown RBP16.5■□□□□ 0.23
SSH1-209ENST00000551165 TRBV6-7A0A0A0MS04 114 aa16.49■□□□□ 0.23
SSH1-209ENST00000551165 CXCL2P19875 107 aa16.49■□□□□ 0.23
SSH1-209ENST00000551165 GABRA2P47869 451 aa16.49■□□□□ 0.23
SSH1-209ENST00000551165 KCNJ3P48549 501 aa16.49■□□□□ 0.23
SSH1-209ENST00000551165 UCP3P55916 312 aa16.49■□□□□ 0.23
SSH1-209ENST00000551165 ABCA11PQ4W5N1 156 aa16.49■□□□□ 0.23
SSH1-209ENST00000551165 SSX8Q7RTT4 187 aa16.49■□□□□ 0.23
SSH1-209ENST00000551165 SGPP2Q8IWX5 399 aa16.49■□□□□ 0.23
SSH1-209ENST00000551165 ERRFI1Q9UJM3 462 aaPredicted RBP16.49■□□□□ 0.23
SSH1-209ENST00000551165 ZDHHC8Q9ULC8 765 aa16.49■□□□□ 0.23
SSH1-209ENST00000551165 DSCAMO60469 2012 aa16.49■□□□□ 0.23
SSH1-209ENST00000551165 DYSFO75923 2080 aa16.49■□□□□ 0.23
SSH1-209ENST00000551165 A0A1B0GW55 424 aa16.49■□□□□ 0.23
SSH1-209ENST00000551165 C17orf100A8MU93 164 aa16.49■□□□□ 0.23
SSH1-209ENST00000551165 ZNF737O75373 536 aa16.49■□□□□ 0.23
SSH1-209ENST00000551165 IFNA2P01563 188 aa16.49■□□□□ 0.23
SSH1-209ENST00000551165 DUX4L2P0CJ85 424 aa16.49■□□□□ 0.23
SSH1-209ENST00000551165 DUX4L3P0CJ86 424 aa16.49■□□□□ 0.23
SSH1-209ENST00000551165 DUX4L4P0CJ87 422 aa16.49■□□□□ 0.23
SSH1-209ENST00000551165 DUX4L5P0CJ88 424 aa16.49■□□□□ 0.23
SSH1-209ENST00000551165 DUX4L6P0CJ89 424 aa16.49■□□□□ 0.23
SSH1-209ENST00000551165 DUX4L7P0CJ90 424 aa16.49■□□□□ 0.23
SSH1-209ENST00000551165 DUX4L9Q6RFH8 374 aaPredicted RBP16.49■□□□□ 0.23
SSH1-209ENST00000551165 ZNF818PQ6ZRF7 136 aa16.49■□□□□ 0.23
SSH1-209ENST00000551165 ZNRF1Q8ND25 227 aa16.49■□□□□ 0.23
SSH1-209ENST00000551165 DUX4Q9UBX2 424 aa16.49■□□□□ 0.23
SSH1-209ENST00000551165 C5orf51A6NDU8 294 aa16.48■□□□□ 0.23
SSH1-209ENST00000551165 HOXB5P09067 269 aa16.48■□□□□ 0.23
SSH1-209ENST00000551165 OR5AC1P0C628 307 aa16.48■□□□□ 0.23
SSH1-209ENST00000551165 SELLP14151 372 aa16.48■□□□□ 0.23
SSH1-209ENST00000551165 TLE1Q04724 770 aa16.48■□□□□ 0.23
SSH1-209ENST00000551165 SRSF4Q08170 494 aaKnown RBP16.48■□□□□ 0.23
SSH1-209ENST00000551165 SLC38A6Q8IZM9 456 aa16.48■□□□□ 0.23
SSH1-209ENST00000551165 CABLES2Q9BTV7 478 aa16.48■□□□□ 0.23
SSH1-209ENST00000551165 CCL28Q9NRJ3 127 aa16.48■□□□□ 0.23
SSH1-209ENST00000551165 NDRG3Q9UGV2 375 aa16.48■□□□□ 0.23
SSH1-209ENST00000551165 FXYD6-FXYD2A0A087WZ82 144 aa16.48■□□□□ 0.23
SSH1-209ENST00000551165 TMEM30CPA0ZSE6 113 aa16.48■□□□□ 0.23
SSH1-209ENST00000551165 IFNL4K9M1U5 179 aa16.48■□□□□ 0.23
SSH1-209ENST00000551165 DIRAS3O95661 229 aa16.48■□□□□ 0.23
SSH1-209ENST00000551165 DEFB108BQ8NET1 73 aa16.48■□□□□ 0.23
SSH1-209ENST00000551165 OR1L1Q8NH94 360 aa16.48■□□□□ 0.23
SSH1-209ENST00000551165 OR10J5Q8NHC4 309 aa16.48■□□□□ 0.23
SSH1-209ENST00000551165 COQ8AQ8NI60 647 aa16.48■□□□□ 0.23
SSH1-209ENST00000551165 OR10C1Q96KK4 312 aa16.48■□□□□ 0.23
SSH1-209ENST00000551165 NAA60Q9H7X0 242 aa16.48■□□□□ 0.23
SSH1-209ENST00000551165 PCDHB10Q9UN67 800 aa16.48■□□□□ 0.23
SSH1-209ENST00000551165 HSD17B6O14756 317 aa16.47■□□□□ 0.23
SSH1-209ENST00000551165 CTXN2P0C2S0 81 aa16.47■□□□□ 0.23
SSH1-209ENST00000551165 TFF3Q07654 80 aa16.47■□□□□ 0.23
SSH1-209ENST00000551165 EDDM3AQ14507 147 aa16.47■□□□□ 0.23
SSH1-209ENST00000551165 KRBOX4Q5JUW0 171 aa16.47■□□□□ 0.23
SSH1-209ENST00000551165 SLC35E4Q6ICL7 350 aa16.47■□□□□ 0.23
SSH1-209ENST00000551165 H1FOOQ8IZA3 346 aaPredicted RBP16.47■□□□□ 0.23
SSH1-209ENST00000551165 LILRB1Q8NHL6 650 aaPredicted RBP16.47■□□□□ 0.23
SSH1-209ENST00000551165 MRGPRDQ8TDS7 321 aa16.47■□□□□ 0.23
SSH1-209ENST00000551165 PPP1R1CQ8WVI7 109 aa16.47■□□□□ 0.23
SSH1-209ENST00000551165 PIK3IP1Q96FE7 263 aa16.47■□□□□ 0.23
SSH1-209ENST00000551165 KCNJ16Q9NPI9 418 aa16.47■□□□□ 0.23
SSH1-209ENST00000551165 RNF7Q9UBF6 113 aa16.47■□□□□ 0.23
SSH1-209ENST00000551165 C12orf77C9JDV5 145 aa16.46■□□□□ 0.23
SSH1-209ENST00000551165 H7C1Q1 480 aa16.46■□□□□ 0.23
SSH1-209ENST00000551165 CD8AP01732 235 aa16.46■□□□□ 0.23
SSH1-209ENST00000551165 CD3EP07766 207 aa16.46■□□□□ 0.23
SSH1-209ENST00000551165 HMGN3Q15651 99 aa16.46■□□□□ 0.23
SSH1-209ENST00000551165 MST1LQ2TV78 715 aa16.46■□□□□ 0.23
SSH1-209ENST00000551165 LPCAT3Q6P1A2 487 aa16.46■□□□□ 0.23
SSH1-209ENST00000551165 OR13A1Q8NGR1 328 aa16.46■□□□□ 0.23
SSH1-209ENST00000551165 SLC5A7Q9GZV3 580 aa16.46■□□□□ 0.23
SSH1-209ENST00000551165 RDH8Q9NYR8 311 aa16.46■□□□□ 0.23
SSH1-209ENST00000551165 PPP1R3CQ9UQK1 317 aa16.46■□□□□ 0.23
SSH1-209ENST00000551165 MAB21L2Q9Y586 359 aa16.46■□□□□ 0.23
SSH1-209ENST00000551165 USP24Q9UPU5 2620 aa16.46■□□□□ 0.23
SSH1-209ENST00000551165 ARID1AO14497 2285 aa16.46■□□□□ 0.23
SSH1-209ENST00000551165 A0A0B4J2A0 478 aa16.46■□□□□ 0.23
SSH1-209ENST00000551165 ARPC5O15511 151 aa16.46■□□□□ 0.23
SSH1-209ENST00000551165 GNLYP22749 145 aa16.46■□□□□ 0.23
SSH1-209ENST00000551165 TNFSF4P23510 183 aa16.46■□□□□ 0.23
SSH1-209ENST00000551165 TESK1Q15569 626 aa16.46■□□□□ 0.23
SSH1-209ENST00000551165 MOB1BQ7L9L4 216 aa16.46■□□□□ 0.23
SSH1-209ENST00000551165 ANGPTL6Q8NI99 470 aa16.46■□□□□ 0.23
SSH1-209ENST00000551165 TP53RKQ96S44 253 aa16.46■□□□□ 0.23
SSH1-209ENST00000551165 SHPKQ9UHJ6 478 aa16.46■□□□□ 0.23
SSH1-209ENST00000551165 M0R233 179 aa16.45■□□□□ 0.22
SSH1-209ENST00000551165 TMEM187Q14656 261 aa16.45■□□□□ 0.22
SSH1-209ENST00000551165 FAM90A1Q86YD7 464 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms