RNA–Protein interactions for RNA: ENST00000550987.5

CPSF6-206, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-206ENST00000550987 SPAG16Q8N0X2 631 aa3.69□□□□□ -1.82
CPSF6-206ENST00000550987 ZFP41Q8N8Y5 198 aa3.69□□□□□ -1.82
CPSF6-206ENST00000550987 NPBQ8NG41 125 aa3.69□□□□□ -1.82
CPSF6-206ENST00000550987 OR2D3Q8NGH3 330 aa3.69□□□□□ -1.82
CPSF6-206ENST00000550987 OR5M1Q8NGP8 315 aa3.69□□□□□ -1.82
CPSF6-206ENST00000550987 OR2L8Q8NGY9 312 aa3.69□□□□□ -1.82
CPSF6-206ENST00000550987 OR51E1Q8TCB6 317 aa3.69□□□□□ -1.82
CPSF6-206ENST00000550987 DTD1Q8TEA8 209 aa3.69□□□□□ -1.82
CPSF6-206ENST00000550987 OR2M2Q96R28 347 aa3.69□□□□□ -1.82
CPSF6-206ENST00000550987 NRTNQ99748 197 aa3.69□□□□□ -1.82
CPSF6-206ENST00000550987 TIMM29Q9BSF4 260 aa3.69□□□□□ -1.82
CPSF6-206ENST00000550987 MAP1LC3CQ9BXW4 147 aa3.69□□□□□ -1.82
CPSF6-206ENST00000550987 TCEAL2Q9H3H9 227 aaPredicted RBP3.69□□□□□ -1.82
CPSF6-206ENST00000550987 KIR3DX1Q9H7L2 352 aa3.69□□□□□ -1.82
CPSF6-206ENST00000550987 ANKHQ9HCJ1 492 aa3.69□□□□□ -1.82
CPSF6-206ENST00000550987 HRASLSQ9HDD0 168 aa3.69□□□□□ -1.82
CPSF6-206ENST00000550987 NECAP2Q9NVZ3 263 aa3.69□□□□□ -1.82
CPSF6-206ENST00000550987 CLN6Q9NWW5 311 aa3.69□□□□□ -1.82
CPSF6-206ENST00000550987 POLR3HQ9Y535 204 aaPredicted RBP3.69□□□□□ -1.82
CPSF6-206ENST00000550987 F11RQ9Y624 299 aaKnown RBP3.69□□□□□ -1.82
CPSF6-206ENST00000550987 SMAD5-AS1Q9Y6J3 95 aa3.69□□□□□ -1.82
CPSF6-206ENST00000550987 PKHD1P08F94 4074 aa3.69□□□□□ -1.82
CPSF6-206ENST00000550987 HSPG2P98160 4391 aa3.69□□□□□ -1.82
CPSF6-206ENST00000550987 HUWE1Q7Z6Z7 4374 aaKnown RBP3.69□□□□□ -1.82
CPSF6-206ENST00000550987 CR1P17927 2039 aa3.68□□□□□ -1.82
CPSF6-206ENST00000550987 FUOMA2VDF0 154 aa3.68□□□□□ -1.82
CPSF6-206ENST00000550987 C2orf74A8MZ97 194 aa3.68□□□□□ -1.82
CPSF6-206ENST00000550987 D6RAR5 112 aa3.68□□□□□ -1.82
CPSF6-206ENST00000550987 SMLR1H3BR10 107 aa3.68□□□□□ -1.82
CPSF6-206ENST00000550987 CLDN34H7C241 214 aa3.68□□□□□ -1.82
CPSF6-206ENST00000550987 SUPT3HO75486 399 aa3.68□□□□□ -1.82
CPSF6-206ENST00000550987 PSMG1O95456 288 aa3.68□□□□□ -1.82
CPSF6-206ENST00000550987 PRB2P02812 416 aaPredicted RBP3.68□□□□□ -1.82
CPSF6-206ENST00000550987 GNAO1P09471 354 aa3.68□□□□□ -1.82
CPSF6-206ENST00000550987 CCL4P13236 92 aa3.68□□□□□ -1.82
CPSF6-206ENST00000550987 CBR1P16152 277 aa3.68□□□□□ -1.82
CPSF6-206ENST00000550987 ZNF30P17039 623 aa3.68□□□□□ -1.82
CPSF6-206ENST00000550987 CSNK2A2P19784 350 aaPredicted RBP3.68□□□□□ -1.82
CPSF6-206ENST00000550987 HTR2CP28335 458 aa3.68□□□□□ -1.82
CPSF6-206ENST00000550987 CFHR2P36980 270 aa3.68□□□□□ -1.82
CPSF6-206ENST00000550987 CA7P43166 264 aa3.68□□□□□ -1.82
CPSF6-206ENST00000550987 CAPZBP47756 277 aa3.68□□□□□ -1.82
CPSF6-206ENST00000550987 DNASE1L1P49184 302 aa3.68□□□□□ -1.82
CPSF6-206ENST00000550987 SPCS3P61009 180 aa3.68□□□□□ -1.82
CPSF6-206ENST00000550987 RPS24P62847 133 aaKnown RBP3.68□□□□□ -1.82
CPSF6-206ENST00000550987 GNB2P62879 340 aa3.68□□□□□ -1.82
CPSF6-206ENST00000550987 NDPQ00604 133 aa3.68□□□□□ -1.82
CPSF6-206ENST00000550987 QPRTQ15274 297 aa3.68□□□□□ -1.82
CPSF6-206ENST00000550987 ZNHIT3Q15649 155 aaPredicted RBP3.68□□□□□ -1.82
CPSF6-206ENST00000550987 ZNF79Q15937 498 aa3.68□□□□□ -1.82
CPSF6-206ENST00000550987 ZNF726P1Q15940 193 aa3.68□□□□□ -1.82
CPSF6-206ENST00000550987 GABRA6Q16445 453 aa3.68□□□□□ -1.82
CPSF6-206ENST00000550987 SNRNP35Q16560 246 aaKnown RBP3.68□□□□□ -1.82
CPSF6-206ENST00000550987 POU2AF1Q16633 256 aa3.68□□□□□ -1.82
CPSF6-206ENST00000550987 NDUFA5Q16718 116 aa3.68□□□□□ -1.82
CPSF6-206ENST00000550987 TMEM183BQ1AE95 376 aa3.68□□□□□ -1.82
CPSF6-206ENST00000550987 RNF212Q495C1 297 aa3.68□□□□□ -1.82
CPSF6-206ENST00000550987 UBE2UQ5VVX9 321 aa3.68□□□□□ -1.82
CPSF6-206ENST00000550987 METTL21CQ5VZV1 264 aa3.68□□□□□ -1.82
CPSF6-206ENST00000550987 MBOAT2Q6ZWT7 520 aa3.68□□□□□ -1.82
CPSF6-206ENST00000550987 SSX6Q7RTT6 188 aa3.68□□□□□ -1.82
CPSF6-206ENST00000550987 NT5DC3Q86UY8 548 aa3.68□□□□□ -1.82
CPSF6-206ENST00000550987 FUNDC1Q8IVP5 155 aa3.68□□□□□ -1.82
CPSF6-206ENST00000550987 TMEM183AQ8IXX5 376 aa3.68□□□□□ -1.82
CPSF6-206ENST00000550987 ZNF738Q8NE65 137 aa3.68□□□□□ -1.82
CPSF6-206ENST00000550987 OR4S2Q8NH73 311 aa3.68□□□□□ -1.82
CPSF6-206ENST00000550987 FAM172AQ8WUF8 416 aa3.68□□□□□ -1.82
CPSF6-206ENST00000550987 LRRC29Q8WV35 223 aa3.68□□□□□ -1.82
CPSF6-206ENST00000550987 C22orf15Q8WYQ4 148 aa3.68□□□□□ -1.82
CPSF6-206ENST00000550987 WFIKKN1Q96NZ8 548 aa3.68□□□□□ -1.82
CPSF6-206ENST00000550987 PRRT1Q99946 306 aa3.68□□□□□ -1.82
CPSF6-206ENST00000550987 UTP23Q9BRU9 249 aaKnown RBP3.68□□□□□ -1.82
CPSF6-206ENST00000550987 RSG1Q9BU20 258 aa3.68□□□□□ -1.82
CPSF6-206ENST00000550987 PDFQ9HBH1 243 aa3.68□□□□□ -1.82
CPSF6-206ENST00000550987 C12orf4Q9NQ89 552 aa3.68□□□□□ -1.82
CPSF6-206ENST00000550987 C1orf109Q9NX04 203 aa3.68□□□□□ -1.82
CPSF6-206ENST00000550987 ZNF337Q9Y3M9 751 aa3.68□□□□□ -1.82
CPSF6-206ENST00000550987 TBL2Q9Y4P3 447 aaKnown RBP3.68□□□□□ -1.82
CPSF6-206ENST00000550987 GTF3C1Q12789 2109 aa3.68□□□□□ -1.82
CPSF6-206ENST00000550987 DNAH10Q8IVF4 4471 aa3.67□□□□□ -1.82
CPSF6-206ENST00000550987 A6NDX4 124 aa3.67□□□□□ -1.82
CPSF6-206ENST00000550987 TRIM49D1C9J1S8 452 aa3.67□□□□□ -1.82
CPSF6-206ENST00000550987 PRMT5O14744 637 aaPredicted RBP3.67□□□□□ -1.82
CPSF6-206ENST00000550987 ACOX3O15254 700 aa3.67□□□□□ -1.82
CPSF6-206ENST00000550987 SNAI2O43623 268 aa3.67□□□□□ -1.82
CPSF6-206ENST00000550987 TCF21O43680 179 aa3.67□□□□□ -1.82
CPSF6-206ENST00000550987 STX10O60499 249 aa3.67□□□□□ -1.82
CPSF6-206ENST00000550987 DHFRP00374 187 aa3.67□□□□□ -1.82
CPSF6-206ENST00000550987 EIF4EP06730 217 aaKnown RBP3.67□□□□□ -1.82
CPSF6-206ENST00000550987 CTSLP07711 333 aa3.67□□□□□ -1.82
CPSF6-206ENST00000550987 NQO1P15559 274 aaKnown RBP3.67□□□□□ -1.82
CPSF6-206ENST00000550987 CD36P16671 472 aa3.67□□□□□ -1.82
CPSF6-206ENST00000550987 HLA-DMAP28067 261 aa3.67□□□□□ -1.82
CPSF6-206ENST00000550987 RPL14P50914 215 aaKnown RBP3.67□□□□□ -1.82
CPSF6-206ENST00000550987 NKX2-5P52952 324 aaPredicted RBP3.67□□□□□ -1.82
CPSF6-206ENST00000550987 MLF1P58340 268 aa3.67□□□□□ -1.82
CPSF6-206ENST00000550987 HMGCS1Q01581 520 aa3.67□□□□□ -1.82
CPSF6-206ENST00000550987 DAZ2Q13117 558 aaKnown RBP3.67□□□□□ -1.82
CPSF6-206ENST00000550987 ZNF266Q14584 549 aa3.67□□□□□ -1.82
CPSF6-206ENST00000550987 PSG5Q15238 335 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms