RNA–Protein interactions for RNA: ENST00000548938.5

HDAC7-228, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 2,719 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-228ENST00000548938 FKBP2P26885 142 aaKnown RBP11.78□□□□□ -0.52
HDAC7-228ENST00000548938 FUT6P51993 359 aa11.78□□□□□ -0.52
HDAC7-228ENST00000548938 HERPUD1Q15011 391 aa11.78□□□□□ -0.52
HDAC7-228ENST00000548938 ZNF468Q5VIY5 522 aaPredicted RBP11.78□□□□□ -0.52
HDAC7-228ENST00000548938 ZNF787Q6DD87 383 aa11.78□□□□□ -0.52
HDAC7-228ENST00000548938 SSX7Q7RTT5 188 aa11.78□□□□□ -0.52
HDAC7-228ENST00000548938 CCL28Q9NRJ3 127 aa11.78□□□□□ -0.52
HDAC7-228ENST00000548938 TRAV1-1A0A0B4J248 108 aa11.77□□□□□ -0.52
HDAC7-228ENST00000548938 TNFSF11O14788 317 aa11.77□□□□□ -0.52
HDAC7-228ENST00000548938 IFNA10P01566 189 aa11.77□□□□□ -0.52
HDAC7-228ENST00000548938 TK1P04183 234 aa11.77□□□□□ -0.52
HDAC7-228ENST00000548938 CD81P60033 236 aa11.77□□□□□ -0.52
HDAC7-228ENST00000548938 RPS18P62269 152 aaKnown RBP11.77□□□□□ -0.52
HDAC7-228ENST00000548938 PNRC1Q12796 327 aaPredicted RBP11.77□□□□□ -0.52
HDAC7-228ENST00000548938 ZNF726P1Q15940 193 aa11.77□□□□□ -0.52
HDAC7-228ENST00000548938 WDR74Q6RFH5 385 aaPredicted RBP11.77□□□□□ -0.52
HDAC7-228ENST00000548938 WDR5BQ86VZ2 330 aa11.77□□□□□ -0.52
HDAC7-228ENST00000548938 STX12Q86Y82 276 aa11.77□□□□□ -0.52
HDAC7-228ENST00000548938 H1FOOQ8IZA3 346 aaPredicted RBP11.77□□□□□ -0.52
HDAC7-228ENST00000548938 ALKBH3Q96Q83 286 aaPredicted RBP11.77□□□□□ -0.52
HDAC7-228ENST00000548938 CABLES2Q9BTV7 478 aa11.77□□□□□ -0.52
HDAC7-228ENST00000548938 SRXN1Q9BYN0 137 aa11.77□□□□□ -0.52
HDAC7-228ENST00000548938 FSCN3Q9NQT6 498 aa11.77□□□□□ -0.52
HDAC7-228ENST00000548938 FAM86C1Q9NVL1 165 aa11.77□□□□□ -0.52
HDAC7-228ENST00000548938 CISD1Q9NZ45 108 aaKnown RBP11.77□□□□□ -0.52
HDAC7-228ENST00000548938 A0A087WZY1 265 aa11.77□□□□□ -0.53
HDAC7-228ENST00000548938 C9J4A7 227 aa11.77□□□□□ -0.53
HDAC7-228ENST00000548938 HSPB6O14558 160 aa11.77□□□□□ -0.53
HDAC7-228ENST00000548938 VAMP5O95183 116 aa11.77□□□□□ -0.53
HDAC7-228ENST00000548938 TDGF1P13385 188 aa11.77□□□□□ -0.53
HDAC7-228ENST00000548938 MMP9P14780 707 aa11.77□□□□□ -0.53
HDAC7-228ENST00000548938 NTF4P34130 210 aa11.77□□□□□ -0.53
HDAC7-228ENST00000548938 TAS2R60P59551 318 aa11.77□□□□□ -0.53
HDAC7-228ENST00000548938 IZUMO4Q1ZYL8 232 aa11.77□□□□□ -0.53
HDAC7-228ENST00000548938 ZNF385CQ66K41 422 aaPredicted RBP11.77□□□□□ -0.53
HDAC7-228ENST00000548938 PMS2CLQ68D20 193 aa11.77□□□□□ -0.53
HDAC7-228ENST00000548938 GPR137CQ8N3F9 429 aa11.77□□□□□ -0.53
HDAC7-228ENST00000548938 OR5R1Q8NH85 324 aa11.77□□□□□ -0.53
HDAC7-228ENST00000548938 CA5BP1Q8WTZ4 195 aa11.77□□□□□ -0.53
HDAC7-228ENST00000548938 TMEM242Q9NWH2 141 aa11.77□□□□□ -0.53
HDAC7-228ENST00000548938 LRFN1Q9P244 771 aa11.77□□□□□ -0.53
HDAC7-228ENST00000548938 SDK2Q58EX2 2172 aa11.76□□□□□ -0.53
HDAC7-228ENST00000548938 TRBV24-1A0A075B6N3 115 aa11.76□□□□□ -0.53
HDAC7-228ENST00000548938 A0A0J9YW62 118 aa11.76□□□□□ -0.53
HDAC7-228ENST00000548938 OR6C6A6NF89 314 aa11.76□□□□□ -0.53
HDAC7-228ENST00000548938 CD55P08174 381 aa11.76□□□□□ -0.53
HDAC7-228ENST00000548938 ZXDAP98168 799 aa11.76□□□□□ -0.53
HDAC7-228ENST00000548938 OR4X1Q8NH49 305 aa11.76□□□□□ -0.53
HDAC7-228ENST00000548938 AKIRIN1Q9H9L7 192 aaPredicted RBP11.76□□□□□ -0.53
HDAC7-228ENST00000548938 CDH20Q9HBT6 801 aa11.76□□□□□ -0.53
HDAC7-228ENST00000548938 SDF2L1Q9HCN8 221 aa11.76□□□□□ -0.53
HDAC7-228ENST00000548938 PITPNC1Q9UKF7 332 aa11.76□□□□□ -0.53
HDAC7-228ENST00000548938 DUXBA0A1W2PPF3 345 aa11.76□□□□□ -0.53
HDAC7-228ENST00000548938 TP53I11O14683 189 aa11.76□□□□□ -0.53
HDAC7-228ENST00000548938 DFFBO76075 338 aa11.76□□□□□ -0.53
HDAC7-228ENST00000548938 IFNA5P01569 189 aa11.76□□□□□ -0.53
HDAC7-228ENST00000548938 PAX1P15863 534 aa11.76□□□□□ -0.53
HDAC7-228ENST00000548938 OR8G1Q15617 311 aa11.76□□□□□ -0.53
HDAC7-228ENST00000548938 FGFBP3Q8TAT2 258 aa11.76□□□□□ -0.53
HDAC7-228ENST00000548938 MISP3Q96FF7 219 aa11.76□□□□□ -0.53
HDAC7-228ENST00000548938 HS3ST6Q96QI5 342 aa11.76□□□□□ -0.53
HDAC7-228ENST00000548938 Q9N2K0 584 aa11.76□□□□□ -0.53
HDAC7-228ENST00000548938 TMEM38BQ9NVV0 291 aa11.76□□□□□ -0.53
HDAC7-228ENST00000548938 PILRBQ9UKJ0 227 aa11.76□□□□□ -0.53
HDAC7-228ENST00000548938 IGKV1-6A0A0C4DH72 117 aa11.75□□□□□ -0.53
HDAC7-228ENST00000548938 TGOLN2O43493 480 aa11.75□□□□□ -0.53
HDAC7-228ENST00000548938 CCL3P10147 92 aa11.75□□□□□ -0.53
HDAC7-228ENST00000548938 PSG4Q00888 419 aa11.75□□□□□ -0.53
HDAC7-228ENST00000548938 FAM180AQ6UWF9 173 aa11.75□□□□□ -0.53
HDAC7-228ENST00000548938 RNASE11Q8TAA1 199 aaKnown RBP11.75□□□□□ -0.53
HDAC7-228ENST00000548938 GPR87Q9BY21 358 aa11.75□□□□□ -0.53
HDAC7-228ENST00000548938 IL36RNQ9UBH0 155 aa11.75□□□□□ -0.53
HDAC7-228ENST00000548938 ZIC3O60481 467 aa11.75□□□□□ -0.53
HDAC7-228ENST00000548938 AMBPP02760 352 aa11.75□□□□□ -0.53
HDAC7-228ENST00000548938 OPN1MWP04001 364 aa11.75□□□□□ -0.53
HDAC7-228ENST00000548938 CST2P09228 141 aa11.75□□□□□ -0.53
HDAC7-228ENST00000548938 OPN1MW2P0DN77 364 aa11.75□□□□□ -0.53
HDAC7-228ENST00000548938 OPN1MW3P0DN78 364 aa11.75□□□□□ -0.53
HDAC7-228ENST00000548938 GZMBP10144 247 aa11.75□□□□□ -0.53
HDAC7-228ENST00000548938 EPHA8P29322 1005 aaPredicted RBP11.75□□□□□ -0.53
HDAC7-228ENST00000548938 TSPAN7P41732 249 aa11.75□□□□□ -0.53
HDAC7-228ENST00000548938 ANKRD39Q53RE8 183 aa11.75□□□□□ -0.53
HDAC7-228ENST00000548938 WDR25Q64LD2 544 aaPredicted RBP11.75□□□□□ -0.53
HDAC7-228ENST00000548938 TMEM183AQ8IXX5 376 aa11.75□□□□□ -0.53
HDAC7-228ENST00000548938 OR5D13Q8NGL4 314 aa11.75□□□□□ -0.53
HDAC7-228ENST00000548938 OR2V1Q8NHB1 315 aa11.75□□□□□ -0.53
HDAC7-228ENST00000548938 NCOR1O75376 2440 aa11.74□□□□□ -0.53
HDAC7-228ENST00000548938 ZNF816-ZNF321PA0A0X1KG74 233 aa11.74□□□□□ -0.53
HDAC7-228ENST00000548938 CEBPZOSA8MTT3 80 aa11.74□□□□□ -0.53
HDAC7-228ENST00000548938 TUSC2O75896 110 aa11.74□□□□□ -0.53
HDAC7-228ENST00000548938 SNRPCP09234 159 aaKnown RBP11.74□□□□□ -0.53
HDAC7-228ENST00000548938 BCL3P20749 454 aa11.74□□□□□ -0.53
HDAC7-228ENST00000548938 JOSD1Q15040 202 aaPredicted RBP11.74□□□□□ -0.53
HDAC7-228ENST00000548938 OR10A7Q8NGE5 316 aa11.74□□□□□ -0.53
HDAC7-228ENST00000548938 WNT5BQ9H1J7 359 aa11.74□□□□□ -0.53
HDAC7-228ENST00000548938 GAB2Q9UQC2 676 aa11.74□□□□□ -0.53
HDAC7-228ENST00000548938 TECTAO75443 2155 aa11.74□□□□□ -0.53
HDAC7-228ENST00000548938 H0Y980 276 aa11.74□□□□□ -0.53
HDAC7-228ENST00000548938 MKRN2OSH3BPM6 223 aa11.74□□□□□ -0.53
HDAC7-228ENST00000548938 NAPSAO96009 420 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms