RNA–Protein interactions for RNA: ENST00000547654.5

SCAF11-210, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-210ENST00000547654 SCN7AQ01118 1682 aa2.97□□□□□ -1.93
SCAF11-210ENST00000547654 TEP1Q99973 2627 aaKnown RBP2.97□□□□□ -1.93
SCAF11-210ENST00000547654 FRYQ5TBA9 3013 aa2.96□□□□□ -1.94
SCAF11-210ENST00000547654 IGHV6-1A0A0B4J1U7 121 aa2.96□□□□□ -1.94
SCAF11-210ENST00000547654 A6NDX4 124 aa2.96□□□□□ -1.94
SCAF11-210ENST00000547654 OR6C70A6NIJ9 312 aa2.96□□□□□ -1.94
SCAF11-210ENST00000547654 HAT1O14929 419 aa2.96□□□□□ -1.94
SCAF11-210ENST00000547654 TGOLN2O43493 480 aa2.96□□□□□ -1.94
SCAF11-210ENST00000547654 TRAF3IP2O43734 574 aaPredicted RBP2.96□□□□□ -1.94
SCAF11-210ENST00000547654 SS18L1O75177 396 aaPredicted RBP2.96□□□□□ -1.94
SCAF11-210ENST00000547654 CTDNEP1O95476 244 aa2.96□□□□□ -1.94
SCAF11-210ENST00000547654 ASS1P00966 412 aaKnown RBP2.96□□□□□ -1.94
SCAF11-210ENST00000547654 MT-ND4P03905 459 aa2.96□□□□□ -1.94
SCAF11-210ENST00000547654 TYMSP04818 313 aa2.96□□□□□ -1.94
SCAF11-210ENST00000547654 ISG15P05161 165 aa2.96□□□□□ -1.94
SCAF11-210ENST00000547654 KRTAP1-4P0C5Y4 121 aa2.96□□□□□ -1.94
SCAF11-210ENST00000547654 C8orf88P0DMB2 117 aa2.96□□□□□ -1.94
SCAF11-210ENST00000547654 SLC2A1P11166 492 aa2.96□□□□□ -1.94
SCAF11-210ENST00000547654 NUDT1P36639 197 aa2.96□□□□□ -1.94
SCAF11-210ENST00000547654 LGALS7P47929 136 aa2.96□□□□□ -1.94
SCAF11-210ENST00000547654 ZNF136P52737 540 aa2.96□□□□□ -1.94
SCAF11-210ENST00000547654 AP2S1P53680 142 aaPredicted RBP2.96□□□□□ -1.94
SCAF11-210ENST00000547654 GFERP55789 205 aa2.96□□□□□ -1.94
SCAF11-210ENST00000547654 RAB25P57735 213 aa2.96□□□□□ -1.94
SCAF11-210ENST00000547654 GRB2P62993 217 aaKnown RBP2.96□□□□□ -1.94
SCAF11-210ENST00000547654 MGAT3Q09327 533 aa2.96□□□□□ -1.94
SCAF11-210ENST00000547654 DAZ2Q13117 558 aaKnown RBP2.96□□□□□ -1.94
SCAF11-210ENST00000547654 SNRNP35Q16560 246 aaKnown RBP2.96□□□□□ -1.94
SCAF11-210ENST00000547654 HLA-DRB5Q30154 266 aa2.96□□□□□ -1.94
SCAF11-210ENST00000547654 OTPQ5XKR4 325 aa2.96□□□□□ -1.94
SCAF11-210ENST00000547654 TTC33Q6PID6 262 aaPredicted RBP2.96□□□□□ -1.94
SCAF11-210ENST00000547654 C10orf67Q8IYJ2 551 aa2.96□□□□□ -1.94
SCAF11-210ENST00000547654 DRAM1Q8N682 238 aa2.96□□□□□ -1.94
SCAF11-210ENST00000547654 Q8N9W7 124 aa2.96□□□□□ -1.94
SCAF11-210ENST00000547654 SLC26A10Q8NG04 563 aa2.96□□□□□ -1.94
SCAF11-210ENST00000547654 OR4M2Q8NGB6 313 aa2.96□□□□□ -1.94
SCAF11-210ENST00000547654 OR52E4Q8NGH9 312 aa2.96□□□□□ -1.94
SCAF11-210ENST00000547654 ZNF420Q8TAQ5 688 aaPredicted RBP2.96□□□□□ -1.94
SCAF11-210ENST00000547654 RNF138Q8WVD3 245 aa2.96□□□□□ -1.94
SCAF11-210ENST00000547654 TMEM158Q8WZ71 300 aa2.96□□□□□ -1.94
SCAF11-210ENST00000547654 TESCQ96BS2 214 aa2.96□□□□□ -1.94
SCAF11-210ENST00000547654 IMMP1LQ96LU5 166 aa2.96□□□□□ -1.94
SCAF11-210ENST00000547654 CCDC42Q96M95 316 aa2.96□□□□□ -1.94
SCAF11-210ENST00000547654 OR4K3Q96R72 315 aa2.96□□□□□ -1.94
SCAF11-210ENST00000547654 TMEM208Q9BTX3 173 aa2.96□□□□□ -1.94
SCAF11-210ENST00000547654 NUDT9Q9BW91 350 aa2.96□□□□□ -1.94
SCAF11-210ENST00000547654 SAMD10Q9BYL1 202 aa2.96□□□□□ -1.94
SCAF11-210ENST00000547654 SLC25A31Q9H0C2 315 aa2.96□□□□□ -1.94
SCAF11-210ENST00000547654 ASB8Q9H765 288 aa2.96□□□□□ -1.94
SCAF11-210ENST00000547654 METTL17Q9H7H0 456 aaPredicted RBP2.96□□□□□ -1.94
SCAF11-210ENST00000547654 NOX3Q9HBY0 568 aa2.96□□□□□ -1.94
SCAF11-210ENST00000547654 DAZ3Q9NR90 486 aaKnown RBP2.96□□□□□ -1.94
SCAF11-210ENST00000547654 DMAC2Q9NW81 257 aa2.96□□□□□ -1.94
SCAF11-210ENST00000547654 TAS2R9Q9NYW1 312 aa2.96□□□□□ -1.94
SCAF11-210ENST00000547654 FAM186AA6NE01 2351 aa2.96□□□□□ -1.94
SCAF11-210ENST00000547654 LOC400499M0QZD8 3231 aa2.96□□□□□ -1.94
SCAF11-210ENST00000547654 GVINP1Q7Z2Y8 2422 aa2.95□□□□□ -1.94
SCAF11-210ENST00000547654 NRCAMQ92823 1304 aa2.95□□□□□ -1.94
SCAF11-210ENST00000547654 ANKRD17O75179 2603 aaKnown RBP2.95□□□□□ -1.94
SCAF11-210ENST00000547654 MAST2Q6P0Q8 1798 aa2.95□□□□□ -1.94
SCAF11-210ENST00000547654 ABCA7Q8IZY2 2146 aa2.95□□□□□ -1.94
SCAF11-210ENST00000547654 KMT2EQ8IZD2 1858 aa2.95□□□□□ -1.94
SCAF11-210ENST00000547654 IGLV1-50A0A075B6I6 118 aa2.95□□□□□ -1.94
SCAF11-210ENST00000547654 IGKV1-27A0A075B6S5 117 aa2.95□□□□□ -1.94
SCAF11-210ENST00000547654 IGHV5-51A0A0C4DH38 117 aa2.95□□□□□ -1.94
SCAF11-210ENST00000547654 TINCRA0A1B0GVN0 87 aa2.95□□□□□ -1.94
SCAF11-210ENST00000547654 KRBOX1C9JBD0 128 aa2.95□□□□□ -1.94
SCAF11-210ENST00000547654 GPR171O14626 319 aa2.95□□□□□ -1.94
SCAF11-210ENST00000547654 AZIN1O14977 448 aa2.95□□□□□ -1.94
SCAF11-210ENST00000547654 MAGEB4O15481 346 aaPredicted RBP2.95□□□□□ -1.94
SCAF11-210ENST00000547654 CHST10O43529 356 aa2.95□□□□□ -1.94
SCAF11-210ENST00000547654 CCDC22O60826 627 aa2.95□□□□□ -1.94
SCAF11-210ENST00000547654 GATBO75879 557 aaKnown RBP2.95□□□□□ -1.94
SCAF11-210ENST00000547654 CALB1P05937 261 aa2.95□□□□□ -1.94
SCAF11-210ENST00000547654 IGKV5-2P06315 115 aa2.95□□□□□ -1.94
SCAF11-210ENST00000547654 MLNP12872 115 aa2.95□□□□□ -1.94
SCAF11-210ENST00000547654 CD99P14209 185 aa2.95□□□□□ -1.94
SCAF11-210ENST00000547654 SPNP16150 400 aa2.95□□□□□ -1.94
SCAF11-210ENST00000547654 IFNGR2P38484 337 aa2.95□□□□□ -1.94
SCAF11-210ENST00000547654 FAM3AP98173 230 aa2.95□□□□□ -1.94
SCAF11-210ENST00000547654 MPV17L2Q567V2 206 aa2.95□□□□□ -1.94
SCAF11-210ENST00000547654 WDFY1Q8IWB7 410 aa2.95□□□□□ -1.94
SCAF11-210ENST00000547654 CPNE9Q8IYJ1 553 aa2.95□□□□□ -1.94
SCAF11-210ENST00000547654 LRRC34Q8IZ02 419 aa2.95□□□□□ -1.94
SCAF11-210ENST00000547654 HS3ST5Q8IZT8 346 aa2.95□□□□□ -1.94
SCAF11-210ENST00000547654 OR4P4Q8NGL7 312 aa2.95□□□□□ -1.94
SCAF11-210ENST00000547654 OR52P1PQ8NH57 321 aa2.95□□□□□ -1.94
SCAF11-210ENST00000547654 COQ8AQ8NI60 647 aa2.95□□□□□ -1.94
SCAF11-210ENST00000547654 ERMNQ8TAM6 284 aa2.95□□□□□ -1.94
SCAF11-210ENST00000547654 SLC35E1Q96K37 410 aa2.95□□□□□ -1.94
SCAF11-210ENST00000547654 PACRGQ96M98 296 aaPredicted RBP2.95□□□□□ -1.94
SCAF11-210ENST00000547654 NRTNQ99748 197 aa2.95□□□□□ -1.94
SCAF11-210ENST00000547654 CHAC1Q9BUX1 264 aa2.95□□□□□ -1.94
SCAF11-210ENST00000547654 GUCA1BQ9UMX6 200 aa2.95□□□□□ -1.94
SCAF11-210ENST00000547654 INSIG2Q9Y5U4 225 aa2.95□□□□□ -1.94
SCAF11-210ENST00000547654 FRYLO94915 3013 aa2.95□□□□□ -1.94
SCAF11-210ENST00000547654 SMG1Q96Q15 3661 aaKnown RBP2.95□□□□□ -1.94
SCAF11-210ENST00000547654 TTC21AQ8NDW8 1320 aa2.94□□□□□ -1.94
SCAF11-210ENST00000547654 CACNA1HO95180 2353 aa2.94□□□□□ -1.94
SCAF11-210ENST00000547654 DDX60LQ5H9U9 1706 aaKnown RBP2.94□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms