RNA–Protein interactions for RNA: ENST00000546215.5

SCARB1-211, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARB1, Length 1,597 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-211ENST00000546215 OMGP23515 440 aa16.97■□□□□ 0.31
SCARB1-211ENST00000546215 SSTR5P35346 364 aa16.97■□□□□ 0.31
SCARB1-211ENST00000546215 GDNFP39905 211 aa16.97■□□□□ 0.31
SCARB1-211ENST00000546215 GUCA2AQ02747 115 aa16.97■□□□□ 0.31
SCARB1-211ENST00000546215 TUSC1Q2TAM9 212 aa16.97■□□□□ 0.31
SCARB1-211ENST00000546215 PRAMEF5Q5TYX0 476 aa16.97■□□□□ 0.31
SCARB1-211ENST00000546215 BCL6BQ8N143 479 aaPredicted RBP16.97■□□□□ 0.31
SCARB1-211ENST00000546215 ISOC1Q96CN7 298 aa16.97■□□□□ 0.31
SCARB1-211ENST00000546215 KCTD12Q96CX2 325 aaKnown RBP16.97■□□□□ 0.31
SCARB1-211ENST00000546215 MS4A7Q9GZW8 240 aaPredicted RBP16.97■□□□□ 0.31
SCARB1-211ENST00000546215 MBNL3Q9NUK0 354 aaKnown RBP16.97■□□□□ 0.31
SCARB1-211ENST00000546215 AK3Q9UIJ7 227 aa16.97■□□□□ 0.31
SCARB1-211ENST00000546215 TRAPPC2LQ9UL33 140 aa16.97■□□□□ 0.31
SCARB1-211ENST00000546215 SOX21Q9Y651 276 aaPredicted RBP16.97■□□□□ 0.31
SCARB1-211ENST00000546215 SESN1Q9Y6P5 492 aa16.97■□□□□ 0.31
SCARB1-211ENST00000546215 NPIPB11E5RHQ5 1161 aa16.96■□□□□ 0.31
SCARB1-211ENST00000546215 NAPSAO96009 420 aa16.96■□□□□ 0.31
SCARB1-211ENST00000546215 RCC1P18754 421 aaPredicted RBP16.96■□□□□ 0.31
SCARB1-211ENST00000546215 SCGB2A2Q13296 93 aa16.96■□□□□ 0.31
SCARB1-211ENST00000546215 OLFML2AQ68BL7 652 aa16.96■□□□□ 0.31
SCARB1-211ENST00000546215 PIP4P2Q8N4L2 257 aa16.96■□□□□ 0.31
SCARB1-211ENST00000546215 C15orf65H3BRN8 121 aa16.95■□□□□ 0.3
SCARB1-211ENST00000546215 MFNGO00587 321 aa16.95■□□□□ 0.3
SCARB1-211ENST00000546215 ORC5O43913 435 aa16.95■□□□□ 0.3
SCARB1-211ENST00000546215 GNB3P16520 340 aa16.95■□□□□ 0.3
SCARB1-211ENST00000546215 BAIAP2L2Q6UXY1 529 aa16.95■□□□□ 0.3
SCARB1-211ENST00000546215 PNKDQ8N490 385 aa16.95■□□□□ 0.3
SCARB1-211ENST00000546215 RFESDQ8TAC1 157 aa16.95■□□□□ 0.3
SCARB1-211ENST00000546215 KIRREL1Q96J84 757 aa16.95■□□□□ 0.3
SCARB1-211ENST00000546215 TMEM133Q9H2Q1 129 aa16.95■□□□□ 0.3
SCARB1-211ENST00000546215 H3BMQ9 156 aa16.94■□□□□ 0.3
SCARB1-211ENST00000546215 HIST1H1DP16402 221 aaKnown RBP16.94■□□□□ 0.3
SCARB1-211ENST00000546215 COX7A1P24310 79 aa16.94■□□□□ 0.3
SCARB1-211ENST00000546215 FPR2P25090 351 aa16.94■□□□□ 0.3
SCARB1-211ENST00000546215 Q6ZPA2 131 aa16.94■□□□□ 0.3
SCARB1-211ENST00000546215 OR13D1Q8NGV5 346 aa16.94■□□□□ 0.3
SCARB1-211ENST00000546215 ARL11Q969Q4 196 aa16.94■□□□□ 0.3
SCARB1-211ENST00000546215 HDHD3Q9BSH5 251 aaPredicted RBP16.94■□□□□ 0.3
SCARB1-211ENST00000546215 RBM38Q9H0Z9 239 aaKnown RBP16.94■□□□□ 0.3
SCARB1-211ENST00000546215 RIMS4Q9H426 269 aaPredicted RBP16.94■□□□□ 0.3
SCARB1-211ENST00000546215 ZMAT3Q9HA38 289 aaKnown RBP16.94■□□□□ 0.3
SCARB1-211ENST00000546215 C2CD3Q4AC94 2353 aa16.94■□□□□ 0.3
SCARB1-211ENST00000546215 A0A1W2PRD5 423 aa16.94■□□□□ 0.3
SCARB1-211ENST00000546215 A0A1W2PRF3 423 aa16.94■□□□□ 0.3
SCARB1-211ENST00000546215 A0A1W2PRM7 423 aa16.94■□□□□ 0.3
SCARB1-211ENST00000546215 C12orf77C9JDV5 145 aa16.94■□□□□ 0.3
SCARB1-211ENST00000546215 NOL3O60936 208 aaKnown RBP16.94■□□□□ 0.3
SCARB1-211ENST00000546215 SCGNO76038 276 aa16.94■□□□□ 0.3
SCARB1-211ENST00000546215 DYNC1I2Q13409 638 aaKnown RBP16.94■□□□□ 0.3
SCARB1-211ENST00000546215 C6orf183Q5T699 404 aa16.94■□□□□ 0.3
SCARB1-211ENST00000546215 OR52W1Q6IF63 320 aa16.94■□□□□ 0.3
SCARB1-211ENST00000546215 ZNF880Q6PDB4 577 aa16.94■□□□□ 0.3
SCARB1-211ENST00000546215 OR11H6Q8NGC7 330 aa16.94■□□□□ 0.3
SCARB1-211ENST00000546215 SLC6A7Q99884 636 aa16.94■□□□□ 0.3
SCARB1-211ENST00000546215 ABCG5Q9H222 651 aa16.94■□□□□ 0.3
SCARB1-211ENST00000546215 IDI2-AS1Q9NZ38 188 aa16.94■□□□□ 0.3
SCARB1-211ENST00000546215 A0A075B6Q4 140 aa16.93■□□□□ 0.3
SCARB1-211ENST00000546215 TRBV6-6A0A0A6YYG2 114 aa16.93■□□□□ 0.3
SCARB1-211ENST00000546215 NPFFO15130 113 aa16.93■□□□□ 0.3
SCARB1-211ENST00000546215 ZNF182P17025 639 aaPredicted RBP16.93■□□□□ 0.3
SCARB1-211ENST00000546215 OR10A7Q8NGE5 316 aa16.93■□□□□ 0.3
SCARB1-211ENST00000546215 ACOT12Q8WYK0 555 aa16.93■□□□□ 0.3
SCARB1-211ENST00000546215 CMSS1Q9BQ75 279 aaKnown RBP16.93■□□□□ 0.3
SCARB1-211ENST00000546215 SUCNR1Q9BXA5 334 aa16.93■□□□□ 0.3
SCARB1-211ENST00000546215 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP16.93■□□□□ 0.3
SCARB1-211ENST00000546215 A0A087X0M5 115 aa16.92■□□□□ 0.3
SCARB1-211ENST00000546215 IGHV2-26A0A0B4J1V2 119 aa16.92■□□□□ 0.3
SCARB1-211ENST00000546215 A0A1B0GX30 115 aa16.92■□□□□ 0.3
SCARB1-211ENST00000546215 SERPINE3A8MV23 424 aa16.92■□□□□ 0.3
SCARB1-211ENST00000546215 ARL6IP1Q15041 203 aa16.92■□□□□ 0.3
SCARB1-211ENST00000546215 CDNFQ49AH0 187 aa16.92■□□□□ 0.3
SCARB1-211ENST00000546215 UBE2NLQ5JXB2 153 aa16.92■□□□□ 0.3
SCARB1-211ENST00000546215 UTF1Q5T230 341 aa16.92■□□□□ 0.3
SCARB1-211ENST00000546215 TRAT1Q6PIZ9 186 aa16.92■□□□□ 0.3
SCARB1-211ENST00000546215 ZNF554Q86TJ5 538 aa16.92■□□□□ 0.3
SCARB1-211ENST00000546215 SAMD12Q8N8I0 201 aa16.92■□□□□ 0.3
SCARB1-211ENST00000546215 UBALD1Q8TB05 177 aa16.92■□□□□ 0.3
SCARB1-211ENST00000546215 DYNC2LI1Q8TCX1 351 aa16.92■□□□□ 0.3
SCARB1-211ENST00000546215 ZNF48Q96MX3 618 aaPredicted RBP16.92■□□□□ 0.3
SCARB1-211ENST00000546215 OCEL1Q9H607 264 aa16.92■□□□□ 0.3
SCARB1-211ENST00000546215 TAF9BQ9HBM6 251 aa16.92■□□□□ 0.3
SCARB1-211ENST00000546215 CHMP1AQ9HD42 196 aaPredicted RBP16.92■□□□□ 0.3
SCARB1-211ENST00000546215 C12orf4Q9NQ89 552 aa16.92■□□□□ 0.3
SCARB1-211ENST00000546215 COMMD3Q9UBI1 195 aa16.92■□□□□ 0.3
SCARB1-211ENST00000546215 ELF5Q9UKW6 265 aaPredicted RBP16.92■□□□□ 0.3
SCARB1-211ENST00000546215 A0A0A6YYH2 397 aa16.91■□□□□ 0.3
SCARB1-211ENST00000546215 FAM172BPA6NC97 362 aa16.91■□□□□ 0.3
SCARB1-211ENST00000546215 A6NJ64 397 aa16.91■□□□□ 0.3
SCARB1-211ENST00000546215 ODF3BA8MYP8 253 aa16.91■□□□□ 0.3
SCARB1-211ENST00000546215 CD34P28906 385 aa16.91■□□□□ 0.3
SCARB1-211ENST00000546215 SAA4P35542 130 aa16.91■□□□□ 0.3
SCARB1-211ENST00000546215 ZNF260Q3ZCT1 412 aa16.91■□□□□ 0.3
SCARB1-211ENST00000546215 MIDNQ504T8 468 aa16.91■□□□□ 0.3
SCARB1-211ENST00000546215 ZNF626Q68DY1 528 aa16.91■□□□□ 0.3
SCARB1-211ENST00000546215 C5orf24Q7Z6I8 188 aa16.91■□□□□ 0.3
SCARB1-211ENST00000546215 PRIMA1Q86XR5 153 aa16.91■□□□□ 0.3
SCARB1-211ENST00000546215 CLEC7AQ9BXN2 247 aa16.91■□□□□ 0.3
SCARB1-211ENST00000546215 A0A0U1RQK1 487 aa16.9■□□□□ 0.3
SCARB1-211ENST00000546215 MEIOCA2RUB1 952 aa16.9■□□□□ 0.3
SCARB1-211ENST00000546215 POM121CA8CG34 1229 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms