RNA–Protein interactions for RNA: ENST00000545856.5

PRPF40A-212, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 1 (best)

Gene PRPF40A, Length 1,358 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-212ENST00000545856 NPIPB11E5RHQ5 1161 aa13.25□□□□□ -0.29
PRPF40A-212ENST00000545856 SPINT2O43291 252 aa13.25□□□□□ -0.29
PRPF40A-212ENST00000545856 ENSAO43768 121 aaKnown RBP13.25□□□□□ -0.29
PRPF40A-212ENST00000545856 UPK1BO75841 260 aa13.25□□□□□ -0.29
PRPF40A-212ENST00000545856 GATA3P23771 443 aa13.25□□□□□ -0.29
PRPF40A-212ENST00000545856 GLIPR1P48060 266 aa13.25□□□□□ -0.29
PRPF40A-212ENST00000545856 LY6G6FQ5SQ64 297 aa13.25□□□□□ -0.29
PRPF40A-212ENST00000545856 BRICD5Q6PL45 260 aa13.25□□□□□ -0.29
PRPF40A-212ENST00000545856 C1orf122Q6ZSJ8 110 aa13.25□□□□□ -0.29
PRPF40A-212ENST00000545856 TOMM5Q8N4H5 51 aa13.25□□□□□ -0.29
PRPF40A-212ENST00000545856 OR52M1Q8NGK5 317 aa13.25□□□□□ -0.29
PRPF40A-212ENST00000545856 SETD6Q8TBK2 473 aa13.25□□□□□ -0.29
PRPF40A-212ENST00000545856 DYRK2Q92630 601 aa13.25□□□□□ -0.29
PRPF40A-212ENST00000545856 CSMD2Q7Z408 3487 aa13.25□□□□□ -0.29
PRPF40A-212ENST00000545856 LOC105371242A0A075B767 164 aa13.24□□□□□ -0.29
PRPF40A-212ENST00000545856 IGHV4-61A0A0C4DH41 118 aa13.24□□□□□ -0.29
PRPF40A-212ENST00000545856 A0A1B0GW55 424 aa13.24□□□□□ -0.29
PRPF40A-212ENST00000545856 B4DSR2 109 aa13.24□□□□□ -0.29
PRPF40A-212ENST00000545856 ZNF736B4DX44 427 aaPredicted RBP13.24□□□□□ -0.29
PRPF40A-212ENST00000545856 FABP7O15540 132 aa13.24□□□□□ -0.29
PRPF40A-212ENST00000545856 CD74P04233 296 aa13.24□□□□□ -0.29
PRPF40A-212ENST00000545856 DUX4L2P0CJ85 424 aa13.24□□□□□ -0.29
PRPF40A-212ENST00000545856 DUX4L3P0CJ86 424 aa13.24□□□□□ -0.29
PRPF40A-212ENST00000545856 DUX4L4P0CJ87 422 aa13.24□□□□□ -0.29
PRPF40A-212ENST00000545856 DUX4L5P0CJ88 424 aa13.24□□□□□ -0.29
PRPF40A-212ENST00000545856 DUX4L6P0CJ89 424 aa13.24□□□□□ -0.29
PRPF40A-212ENST00000545856 DUX4L7P0CJ90 424 aa13.24□□□□□ -0.29
PRPF40A-212ENST00000545856 CGB3P0DN86 165 aa13.24□□□□□ -0.29
PRPF40A-212ENST00000545856 CGB7P0DN87 165 aa13.24□□□□□ -0.29
PRPF40A-212ENST00000545856 SELLP14151 372 aa13.24□□□□□ -0.29
PRPF40A-212ENST00000545856 HTD2P86397 168 aa13.24□□□□□ -0.29
PRPF40A-212ENST00000545856 DCTN2Q13561 401 aaKnown RBP13.24□□□□□ -0.29
PRPF40A-212ENST00000545856 VAX1Q5SQQ9 334 aa13.24□□□□□ -0.29
PRPF40A-212ENST00000545856 DUX4L9Q6RFH8 374 aaPredicted RBP13.24□□□□□ -0.29
PRPF40A-212ENST00000545856 BTN2A1Q7KYR7 527 aa13.24□□□□□ -0.29
PRPF40A-212ENST00000545856 KRTAP1-3Q8IUG1 177 aa13.24□□□□□ -0.29
PRPF40A-212ENST00000545856 ARRDC1Q8N5I2 433 aa13.24□□□□□ -0.29
PRPF40A-212ENST00000545856 DTX3Q8N9I9 347 aa13.24□□□□□ -0.29
PRPF40A-212ENST00000545856 OR5AP2Q8NGF4 316 aa13.24□□□□□ -0.29
PRPF40A-212ENST00000545856 ZNF714Q96N38 554 aa13.24□□□□□ -0.29
PRPF40A-212ENST00000545856 CABLES2Q9BTV7 478 aa13.24□□□□□ -0.29
PRPF40A-212ENST00000545856 DUX4Q9UBX2 424 aa13.24□□□□□ -0.29
PRPF40A-212ENST00000545856 KLK11Q9UBX7 282 aa13.24□□□□□ -0.29
PRPF40A-212ENST00000545856 KBTBD11-OT1A0A1B0GTJ5 212 aa13.23□□□□□ -0.29
PRPF40A-212ENST00000545856 CENPXA8MT69 81 aa13.23□□□□□ -0.29
PRPF40A-212ENST00000545856 KIAA1324LA8MWY0 1029 aaPredicted RBP13.23□□□□□ -0.29
PRPF40A-212ENST00000545856 M0R1W7 72 aa13.23□□□□□ -0.29
PRPF40A-212ENST00000545856 F2RL2O00254 374 aa13.23□□□□□ -0.29
PRPF40A-212ENST00000545856 AKAIN1P0CW23 69 aa13.23□□□□□ -0.29
PRPF40A-212ENST00000545856 GLP1RP43220 463 aa13.23□□□□□ -0.29
PRPF40A-212ENST00000545856 DEFA1P59665 94 aa13.23□□□□□ -0.29
PRPF40A-212ENST00000545856 DEFA3P59666 94 aa13.23□□□□□ -0.29
PRPF40A-212ENST00000545856 ARPC4P59998 168 aa13.23□□□□□ -0.29
PRPF40A-212ENST00000545856 GUCA2AQ02747 115 aa13.23□□□□□ -0.29
PRPF40A-212ENST00000545856 CHRFAM7AQ494W8 412 aa13.23□□□□□ -0.29
PRPF40A-212ENST00000545856 OR4K15Q8NH41 348 aa13.23□□□□□ -0.29
PRPF40A-212ENST00000545856 H1FXQ92522 213 aaKnown RBP13.23□□□□□ -0.29
PRPF40A-212ENST00000545856 GCDHQ92947 438 aaPredicted RBP13.23□□□□□ -0.29
PRPF40A-212ENST00000545856 GALMQ96C23 342 aa13.23□□□□□ -0.29
PRPF40A-212ENST00000545856 HDHD3Q9BSH5 251 aaPredicted RBP13.23□□□□□ -0.29
PRPF40A-212ENST00000545856 REG4Q9BYZ8 158 aa13.23□□□□□ -0.29
PRPF40A-212ENST00000545856 TOLLIPQ9H0E2 274 aa13.23□□□□□ -0.29
PRPF40A-212ENST00000545856 TAF9BQ9HBM6 251 aa13.23□□□□□ -0.29
PRPF40A-212ENST00000545856 NECAP2Q9NVZ3 263 aa13.23□□□□□ -0.29
PRPF40A-212ENST00000545856 SLC23A1Q9UHI7 598 aa13.23□□□□□ -0.29
PRPF40A-212ENST00000545856 ELF5Q9UKW6 265 aaPredicted RBP13.23□□□□□ -0.29
PRPF40A-212ENST00000545856 CR1P17927 2039 aa13.22□□□□□ -0.29
PRPF40A-212ENST00000545856 A0A1W2PQ09 198 aa13.22□□□□□ -0.29
PRPF40A-212ENST00000545856 C12orf77C9JDV5 145 aa13.22□□□□□ -0.29
PRPF40A-212ENST00000545856 FCN3O75636 299 aa13.22□□□□□ -0.29
PRPF40A-212ENST00000545856 TFF1P04155 84 aa13.22□□□□□ -0.29
PRPF40A-212ENST00000545856 ZNF728P0DKX0 622 aa13.22□□□□□ -0.29
PRPF40A-212ENST00000545856 PTHLHP12272 177 aa13.22□□□□□ -0.29
PRPF40A-212ENST00000545856 RBMXP38159 391 aaKnown RBP13.22□□□□□ -0.29
PRPF40A-212ENST00000545856 KLF9Q13886 244 aaPredicted RBP13.22□□□□□ -0.29
PRPF40A-212ENST00000545856 BAK1Q16611 211 aa13.22□□□□□ -0.29
PRPF40A-212ENST00000545856 RNASE10Q5GAN6 216 aaKnown RBP13.22□□□□□ -0.29
PRPF40A-212ENST00000545856 OR52W1Q6IF63 320 aa13.22□□□□□ -0.29
PRPF40A-212ENST00000545856 C16orf87Q6PH81 154 aa13.22□□□□□ -0.29
PRPF40A-212ENST00000545856 BTNL3Q6UXE8 466 aa13.22□□□□□ -0.29
PRPF40A-212ENST00000545856 HEPN1Q6WQI6 88 aa13.22□□□□□ -0.29
PRPF40A-212ENST00000545856 RTN4RL2Q86UN3 420 aa13.22□□□□□ -0.29
PRPF40A-212ENST00000545856 TMEM17Q86X19 198 aa13.22□□□□□ -0.29
PRPF40A-212ENST00000545856 OR13A1Q8NGR1 328 aa13.22□□□□□ -0.29
PRPF40A-212ENST00000545856 OR5H2Q8NGV7 314 aa13.22□□□□□ -0.29
PRPF40A-212ENST00000545856 ZFAND2BQ8WV99 257 aa13.22□□□□□ -0.29
PRPF40A-212ENST00000545856 SNAPC3Q92966 411 aa13.22□□□□□ -0.29
PRPF40A-212ENST00000545856 DACT3Q96B18 629 aaPredicted RBP13.22□□□□□ -0.29
PRPF40A-212ENST00000545856 COX4I2Q96KJ9 171 aa13.22□□□□□ -0.29
PRPF40A-212ENST00000545856 Q96MF0 132 aa13.22□□□□□ -0.29
PRPF40A-212ENST00000545856 ST6GALNAC5Q9BVH7 336 aa13.22□□□□□ -0.29
PRPF40A-212ENST00000545856 NARFLQ9H6Q4 476 aa13.22□□□□□ -0.29
PRPF40A-212ENST00000545856 UNKLQ9H9P5 680 aaKnown RBP13.22□□□□□ -0.29
PRPF40A-212ENST00000545856 C19orf12Q9NSK7 152 aa13.22□□□□□ -0.29
PRPF40A-212ENST00000545856 CALYQ9NYX4 217 aa13.22□□□□□ -0.29
PRPF40A-212ENST00000545856 JPT1Q9UK76 154 aa13.22□□□□□ -0.29
PRPF40A-212ENST00000545856 KPTNQ9Y664 436 aa13.22□□□□□ -0.29
PRPF40A-212ENST00000545856 MED13LQ71F56 2210 aa13.22□□□□□ -0.29
PRPF40A-212ENST00000545856 SETXQ7Z333 2677 aaKnown RBP13.21□□□□□ -0.29
PRPF40A-212ENST00000545856 TRAV20A0A0B4J274 112 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms