RNA–Protein interactions for RNA: ENST00000545707.5

LDLR-204, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-204ENST00000545707 Q6ZS49 121 aa13.48□□□□□ -0.25
LDLR-204ENST00000545707 CMTM1Q8IZ96 169 aa13.48□□□□□ -0.25
LDLR-204ENST00000545707 KDF1Q8NAX2 398 aaPredicted RBP13.48□□□□□ -0.25
LDLR-204ENST00000545707 TCEAL3Q969E4 200 aa13.48□□□□□ -0.25
LDLR-204ENST00000545707 LOXL2Q9Y4K0 774 aa13.48□□□□□ -0.25
LDLR-204ENST00000545707 RNF115Q9Y4L5 304 aa13.48□□□□□ -0.25
LDLR-204ENST00000545707 CD300LBA8K4G0 201 aa13.48□□□□□ -0.25
LDLR-204ENST00000545707 RHBDL1O75783 438 aa13.48□□□□□ -0.25
LDLR-204ENST00000545707 NEURL1O76050 574 aa13.48□□□□□ -0.25
LDLR-204ENST00000545707 SRP19P09132 144 aaKnown RBP13.48□□□□□ -0.25
LDLR-204ENST00000545707 RPS10P46783 165 aaKnown RBP13.48□□□□□ -0.25
LDLR-204ENST00000545707 ICAM4Q14773 271 aa13.48□□□□□ -0.25
LDLR-204ENST00000545707 C6orf15Q6UXA7 325 aaPredicted RBP13.48□□□□□ -0.25
LDLR-204ENST00000545707 THNSL2Q86YJ6 484 aa13.48□□□□□ -0.25
LDLR-204ENST00000545707 TMEM45BQ96B21 275 aa13.48□□□□□ -0.25
LDLR-204ENST00000545707 GPR146Q96CH1 333 aa13.48□□□□□ -0.25
LDLR-204ENST00000545707 OR1A1Q9P1Q5 309 aa13.48□□□□□ -0.25
LDLR-204ENST00000545707 GPR179Q6PRD1 2367 aa13.47□□□□□ -0.25
LDLR-204ENST00000545707 TRAV24A0A0B4J272 114 aa13.47□□□□□ -0.25
LDLR-204ENST00000545707 KIR2DS1A0A191URI9 304 aa13.47□□□□□ -0.25
LDLR-204ENST00000545707 FAM90A10PA6NDY2 464 aa13.47□□□□□ -0.25
LDLR-204ENST00000545707 FAM90A18PA6NE21 464 aa13.47□□□□□ -0.25
LDLR-204ENST00000545707 FAM90A16PA6NEW6 464 aa13.47□□□□□ -0.25
LDLR-204ENST00000545707 FAM90A20PA6NIJ5 464 aa13.47□□□□□ -0.25
LDLR-204ENST00000545707 FAM90A8PA6NJQ4 464 aa13.47□□□□□ -0.25
LDLR-204ENST00000545707 FAM90A7PA6NKC0 464 aa13.47□□□□□ -0.25
LDLR-204ENST00000545707 FAM90A22PA8MWA6 464 aa13.47□□□□□ -0.25
LDLR-204ENST00000545707 FAM90A12PA8MX19 464 aa13.47□□□□□ -0.25
LDLR-204ENST00000545707 FAM90A5PA8MXJ8 464 aa13.47□□□□□ -0.25
LDLR-204ENST00000545707 FAM90A23PA8MXZ1 464 aa13.47□□□□□ -0.25
LDLR-204ENST00000545707 SLC34A2O95436 690 aa13.47□□□□□ -0.25
LDLR-204ENST00000545707 FAM90A15PP0C7V4 464 aa13.47□□□□□ -0.25
LDLR-204ENST00000545707 FAM90A13PP0C7W8 464 aa13.47□□□□□ -0.25
LDLR-204ENST00000545707 FAM90A14PP0C7W9 464 aa13.47□□□□□ -0.25
LDLR-204ENST00000545707 FAM90A24PP0C7X0 464 aa13.47□□□□□ -0.25
LDLR-204ENST00000545707 TAGLN2P37802 199 aaKnown RBP13.47□□□□□ -0.25
LDLR-204ENST00000545707 PLA2G5P39877 138 aa13.47□□□□□ -0.25
LDLR-204ENST00000545707 KIR2DS4P43632 304 aa13.47□□□□□ -0.25
LDLR-204ENST00000545707 CLDN18P56856 261 aa13.47□□□□□ -0.25
LDLR-204ENST00000545707 SSPNQ14714 243 aa13.47□□□□□ -0.25
LDLR-204ENST00000545707 KIR2DS1Q14954 304 aa13.47□□□□□ -0.25
LDLR-204ENST00000545707 HIKESHIQ53FT3 197 aa13.47□□□□□ -0.25
LDLR-204ENST00000545707 ZNF295-AS1Q8N0V1 137 aa13.47□□□□□ -0.25
LDLR-204ENST00000545707 OR2M7Q8NG81 312 aa13.47□□□□□ -0.25
LDLR-204ENST00000545707 APOBEC3DQ96AK3 386 aaPredicted RBP13.47□□□□□ -0.25
LDLR-204ENST00000545707 HIST1H2AAQ96QV6 131 aa13.47□□□□□ -0.25
LDLR-204ENST00000545707 METTL1Q9UBP6 276 aaKnown RBP13.47□□□□□ -0.25
LDLR-204ENST00000545707 A0A1B0GW64 132 aa13.47□□□□□ -0.25
LDLR-204ENST00000545707 YKT6O15498 198 aa13.47□□□□□ -0.25
LDLR-204ENST00000545707 CLN5O75503 358 aa13.47□□□□□ -0.25
LDLR-204ENST00000545707 IGHEP01854 428 aa13.47□□□□□ -0.25
LDLR-204ENST00000545707 F2RP25116 425 aa13.47□□□□□ -0.25
LDLR-204ENST00000545707 AKR1C8PQ5T2L2 129 aa13.47□□□□□ -0.25
LDLR-204ENST00000545707 LINC00696Q6ZRV3 163 aa13.47□□□□□ -0.25
LDLR-204ENST00000545707 SEBOXQ9HB31 216 aaPredicted RBP13.47□□□□□ -0.25
LDLR-204ENST00000545707 GSN-AS1Q9NRJ2 163 aa13.47□□□□□ -0.25
LDLR-204ENST00000545707 BOKQ9UMX3 212 aaPredicted RBP13.47□□□□□ -0.25
LDLR-204ENST00000545707 IGKV3D-15A0A087WSY6 115 aa13.46□□□□□ -0.25
LDLR-204ENST00000545707 SCAF4O95104 1147 aaKnown RBP13.46□□□□□ -0.25
LDLR-204ENST00000545707 FABP1P07148 127 aa13.46□□□□□ -0.25
LDLR-204ENST00000545707 UBE2KP61086 200 aa13.46□□□□□ -0.25
LDLR-204ENST00000545707 OR2T2Q6IF00 324 aa13.46□□□□□ -0.25
LDLR-204ENST00000545707 HEPN1Q6WQI6 88 aa13.46□□□□□ -0.25
LDLR-204ENST00000545707 NUFIP2Q7Z417 695 aaKnown RBP13.46□□□□□ -0.25
LDLR-204ENST00000545707 ZNF429Q86V71 674 aa13.46□□□□□ -0.25
LDLR-204ENST00000545707 OR5D13Q8NGL4 314 aa13.46□□□□□ -0.25
LDLR-204ENST00000545707 POM121L2Q96KW2 1035 aa13.46□□□□□ -0.25
LDLR-204ENST00000545707 YPEL4Q96NS1 127 aa13.46□□□□□ -0.25
LDLR-204ENST00000545707 RSG1Q9BU20 258 aa13.46□□□□□ -0.25
LDLR-204ENST00000545707 ZNF703Q9H7S9 590 aaPredicted RBP13.46□□□□□ -0.25
LDLR-204ENST00000545707 KIAA1456Q9P272 454 aa13.46□□□□□ -0.25
LDLR-204ENST00000545707 CLEC18AA5D8T8 446 aa13.45□□□□□ -0.26
LDLR-204ENST00000545707 YIF1AO95070 293 aa13.45□□□□□ -0.26
LDLR-204ENST00000545707 S100A8P05109 93 aa13.45□□□□□ -0.26
LDLR-204ENST00000545707 SMIM6P0DI80 62 aa13.45□□□□□ -0.26
LDLR-204ENST00000545707 IAPPP10997 89 aa13.45□□□□□ -0.26
LDLR-204ENST00000545707 CA6P23280 308 aa13.45□□□□□ -0.26
LDLR-204ENST00000545707 DLK1P80370 383 aa13.45□□□□□ -0.26
LDLR-204ENST00000545707 MPV17LQ2QL34 196 aa13.45□□□□□ -0.26
LDLR-204ENST00000545707 ZNF324BQ6AW86 544 aaPredicted RBP13.45□□□□□ -0.26
LDLR-204ENST00000545707 CLEC18CQ8NCF0 446 aa13.45□□□□□ -0.26
LDLR-204ENST00000545707 OR10J5Q8NHC4 309 aa13.45□□□□□ -0.26
LDLR-204ENST00000545707 RNASE11Q8TAA1 199 aaKnown RBP13.45□□□□□ -0.26
LDLR-204ENST00000545707 MUCL1Q96DR8 90 aa13.45□□□□□ -0.26
LDLR-204ENST00000545707 C12orf49Q9H741 205 aa13.45□□□□□ -0.26
LDLR-204ENST00000545707 VSIRQ9H7M9 311 aa13.45□□□□□ -0.26
LDLR-204ENST00000545707 H0Y980 276 aa13.45□□□□□ -0.26
LDLR-204ENST00000545707 CER1O95813 267 aa13.45□□□□□ -0.26
LDLR-204ENST00000545707 SERPINE2P07093 398 aa13.45□□□□□ -0.26
LDLR-204ENST00000545707 CXCL1P09341 107 aa13.45□□□□□ -0.26
LDLR-204ENST00000545707 TDGF1P13385 188 aa13.45□□□□□ -0.26
LDLR-204ENST00000545707 WNT5AP41221 380 aa13.45□□□□□ -0.26
LDLR-204ENST00000545707 SLC25A24Q6NUK1 477 aa13.45□□□□□ -0.26
LDLR-204ENST00000545707 SAXO1Q8IYX7 474 aa13.45□□□□□ -0.26
LDLR-204ENST00000545707 OR5A2Q8NGI9 324 aa13.45□□□□□ -0.26
LDLR-204ENST00000545707 OR5P3Q8WZ94 311 aa13.45□□□□□ -0.26
LDLR-204ENST00000545707 PPP1R3CQ9UQK1 317 aa13.45□□□□□ -0.26
LDLR-204ENST00000545707 OR2W1Q9Y3N9 320 aa13.45□□□□□ -0.26
LDLR-204ENST00000545707 WSB1Q9Y6I7 421 aa13.45□□□□□ -0.26
LDLR-204ENST00000545707 AP4M1O00189 453 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms