RNA–Protein interactions for RNA: ENST00000545689.2

COL4A6-209, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,380 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-209ENST00000545689 H1FOOQ8IZA3 346 aaPredicted RBP10.92□□□□□ -0.66
COL4A6-209ENST00000545689 STXBP6Q8NFX7 210 aa10.92□□□□□ -0.66
COL4A6-209ENST00000545689 OR10G8Q8NGN5 311 aa10.92□□□□□ -0.66
COL4A6-209ENST00000545689 LHFPL5Q8TAF8 219 aa10.92□□□□□ -0.66
COL4A6-209ENST00000545689 POM121Q96HA1 1249 aa10.92□□□□□ -0.66
COL4A6-209ENST00000545689 TMEM204Q9BSN7 226 aa10.92□□□□□ -0.66
COL4A6-209ENST00000545689 TTTY12Q9BZ98 90 aa10.92□□□□□ -0.66
COL4A6-209ENST00000545689 DEDDO75618 318 aa10.92□□□□□ -0.66
COL4A6-209ENST00000545689 CXorf1O96002 111 aa10.92□□□□□ -0.66
COL4A6-209ENST00000545689 CXCL2P19875 107 aa10.92□□□□□ -0.66
COL4A6-209ENST00000545689 FOXC1Q12948 553 aa10.92□□□□□ -0.66
COL4A6-209ENST00000545689 OR4D10Q8NGI6 311 aa10.92□□□□□ -0.66
COL4A6-209ENST00000545689 SLC25A40Q8TBP6 338 aa10.92□□□□□ -0.66
COL4A6-209ENST00000545689 SLC25A38Q96DW6 304 aa10.92□□□□□ -0.66
COL4A6-209ENST00000545689 FAM117AQ9C073 453 aa10.92□□□□□ -0.66
COL4A6-209ENST00000545689 GPR132Q9UNW8 380 aa10.92□□□□□ -0.66
COL4A6-209ENST00000545689 SAXO1Q8IYX7 474 aa10.92□□□□□ -0.66
COL4A6-209ENST00000545689 OR2I1PQ8NGU4 316 aa10.92□□□□□ -0.66
COL4A6-209ENST00000545689 NPTNQ9Y639 398 aa10.92□□□□□ -0.66
COL4A6-209ENST00000545689 CCL17Q92583 94 aa10.92□□□□□ -0.66
COL4A6-209ENST00000545689 OR1A1Q9P1Q5 309 aa10.92□□□□□ -0.66
COL4A6-209ENST00000545689 HSF4Q9ULV5 492 aa10.92□□□□□ -0.66
COL4A6-209ENST00000545689 LAIR2Q6ISS4 152 aa10.91□□□□□ -0.66
COL4A6-209ENST00000545689 OR10A7Q8NGE5 316 aa10.91□□□□□ -0.66
COL4A6-209ENST00000545689 PLPPR2Q96GM1 343 aa10.91□□□□□ -0.66
COL4A6-209ENST00000545689 HES7Q9BYE0 225 aa10.91□□□□□ -0.66
COL4A6-209ENST00000545689 GOLT1BQ9Y3E0 138 aa10.91□□□□□ -0.66
COL4A6-209ENST00000545689 A0A0J9YW62 118 aa10.91□□□□□ -0.66
COL4A6-209ENST00000545689 TEX50A0A1B0GTY4 177 aa10.91□□□□□ -0.66
COL4A6-209ENST00000545689 HOXD4P09016 255 aaPredicted RBP10.91□□□□□ -0.66
COL4A6-209ENST00000545689 PGA5P0DJD9 388 aa10.91□□□□□ -0.66
COL4A6-209ENST00000545689 DIRC2Q96SL1 478 aa10.91□□□□□ -0.66
COL4A6-209ENST00000545689 NPDC1Q9NQX5 325 aaPredicted RBP10.91□□□□□ -0.66
COL4A6-209ENST00000545689 KCNK7Q9Y2U2 307 aa10.91□□□□□ -0.66
COL4A6-209ENST00000545689 ZNFX1Q9P2E3 1918 aaKnown RBP10.91□□□□□ -0.66
COL4A6-209ENST00000545689 RNASEKQ6P5S7 137 aaKnown RBP10.91□□□□□ -0.66
COL4A6-209ENST00000545689 C4orf51C9J302 202 aa10.91□□□□□ -0.66
COL4A6-209ENST00000545689 C3orf80F5H4A9 247 aa10.91□□□□□ -0.66
COL4A6-209ENST00000545689 NAT2P11245 290 aa10.91□□□□□ -0.66
COL4A6-209ENST00000545689 ZNF250P15622 560 aa10.91□□□□□ -0.66
COL4A6-209ENST00000545689 MESP2Q0VG99 397 aa10.91□□□□□ -0.66
COL4A6-209ENST00000545689 OR8B3Q8NGG8 313 aa10.91□□□□□ -0.66
COL4A6-209ENST00000545689 APOBEC4Q8WW27 367 aaKnown RBP10.91□□□□□ -0.66
COL4A6-209ENST00000545689 LOXL4Q96JB6 756 aa10.91□□□□□ -0.66
COL4A6-209ENST00000545689 OR8B2Q96RD0 313 aa10.91□□□□□ -0.66
COL4A6-209ENST00000545689 CDX2Q99626 313 aaPredicted RBP10.91□□□□□ -0.66
COL4A6-209ENST00000545689 BRWD3Q6RI45 1802 aa10.91□□□□□ -0.66
COL4A6-209ENST00000545689 PRF1P14222 555 aa10.91□□□□□ -0.66
COL4A6-209ENST00000545689 MDP1Q86V88 176 aa10.91□□□□□ -0.66
COL4A6-209ENST00000545689 MRGPRFQ96AM1 343 aa10.91□□□□□ -0.66
COL4A6-209ENST00000545689 FAM206AQ9NX38 181 aa10.91□□□□□ -0.66
COL4A6-209ENST00000545689 TINAGQ9UJW2 476 aa10.91□□□□□ -0.66
COL4A6-209ENST00000545689 KIAA1324LA8MWY0 1029 aaPredicted RBP10.9□□□□□ -0.66
COL4A6-209ENST00000545689 HOXB1P14653 301 aaPredicted RBP10.9□□□□□ -0.66
COL4A6-209ENST00000545689 PSG4Q00888 419 aa10.9□□□□□ -0.66
COL4A6-209ENST00000545689 LOC285556D6RIA3 1793 aa10.9□□□□□ -0.66
COL4A6-209ENST00000545689 H3BQ15 152 aa10.9□□□□□ -0.66
COL4A6-209ENST00000545689 PPIHO43447 177 aaKnown RBP10.9□□□□□ -0.66
COL4A6-209ENST00000545689 GYPAP02724 150 aa10.9□□□□□ -0.66
COL4A6-209ENST00000545689 PMS2P11Q13670 270 aa10.9□□□□□ -0.66
COL4A6-209ENST00000545689 MOGAT3Q86VF5 341 aa10.9□□□□□ -0.66
COL4A6-209ENST00000545689 KCNE5Q9UJ90 142 aa10.9□□□□□ -0.66
COL4A6-209ENST00000545689 ZFC3H1O60293 1989 aaKnown RBP10.9□□□□□ -0.66
COL4A6-209ENST00000545689 LOC102723971A0A1B0GUV8 181 aa10.9□□□□□ -0.66
COL4A6-209ENST00000545689 COX5BP10606 129 aa10.9□□□□□ -0.66
COL4A6-209ENST00000545689 PSG2P11465 335 aa10.9□□□□□ -0.66
COL4A6-209ENST00000545689 RPS4XP62701 263 aaKnown RBP10.9□□□□□ -0.66
COL4A6-209ENST00000545689 ANKRD55Q3KP44 614 aa10.9□□□□□ -0.66
COL4A6-209ENST00000545689 HIKESHIQ53FT3 197 aa10.9□□□□□ -0.66
COL4A6-209ENST00000545689 TXNDC17Q9BRA2 123 aa10.9□□□□□ -0.66
COL4A6-209ENST00000545689 SYNGR1O43759 233 aa10.9□□□□□ -0.66
COL4A6-209ENST00000545689 SPINK9Q5DT21 86 aa10.9□□□□□ -0.66
COL4A6-209ENST00000545689 PERPQ96FX8 193 aa10.9□□□□□ -0.66
COL4A6-209ENST00000545689 HPRT1P00492 218 aa10.9□□□□□ -0.67
COL4A6-209ENST00000545689 ATP6V0CP27449 155 aa10.9□□□□□ -0.67
COL4A6-209ENST00000545689 MGAT2Q10469 447 aa10.9□□□□□ -0.67
COL4A6-209ENST00000545689 VAMP3Q15836 100 aa10.9□□□□□ -0.67
COL4A6-209ENST00000545689 PKIBQ9C010 78 aa10.9□□□□□ -0.67
COL4A6-209ENST00000545689 FSCN3Q9NQT6 498 aa10.9□□□□□ -0.67
COL4A6-209ENST00000545689 MS4A18H0YCH9 400 aa10.89□□□□□ -0.67
COL4A6-209ENST00000545689 KLF4O43474 513 aa10.89□□□□□ -0.67
COL4A6-209ENST00000545689 PTBP3O95758 552 aaKnown RBP10.89□□□□□ -0.67
COL4A6-209ENST00000545689 MS4A18Q3C1V0 323 aa10.89□□□□□ -0.67
COL4A6-209ENST00000545689 OR1L1Q8NH94 360 aa10.89□□□□□ -0.67
COL4A6-209ENST00000545689 WFDC6Q9BQY6 131 aa10.89□□□□□ -0.67
COL4A6-209ENST00000545689 TMEM222Q9H0R3 208 aa10.89□□□□□ -0.67
COL4A6-209ENST00000545689 S100A4P26447 101 aaKnown RBP10.89□□□□□ -0.67
COL4A6-209ENST00000545689 HOXA6P31267 233 aa10.89□□□□□ -0.67
COL4A6-209ENST00000545689 TNXAQ16473 311 aa10.89□□□□□ -0.67
COL4A6-209ENST00000545689 RIPPLY2Q5TAB7 128 aa10.89□□□□□ -0.67
COL4A6-209ENST00000545689 PET117Q6UWS5 81 aa10.89□□□□□ -0.67
COL4A6-209ENST00000545689 SLC2A8Q9NY64 477 aa10.89□□□□□ -0.67
COL4A6-209ENST00000545689 R4GN57 208 aa10.89□□□□□ -0.67
COL4A6-209ENST00000545689 IGSF23A1L1A6 192 aa10.89□□□□□ -0.67
COL4A6-209ENST00000545689 CD74P04233 296 aa10.89□□□□□ -0.67
COL4A6-209ENST00000545689 IL11P20809 199 aa10.89□□□□□ -0.67
COL4A6-209ENST00000545689 HTR1DP28221 377 aa10.89□□□□□ -0.67
COL4A6-209ENST00000545689 SSX7Q7RTT5 188 aa10.89□□□□□ -0.67
COL4A6-209ENST00000545689 IGKV1D-42A0A075B6H8 117 aa10.89□□□□□ -0.67
COL4A6-209ENST00000545689 MPDU1O75352 247 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms