RNA–Protein interactions for RNA: ENST00000545686.6

TDP1-204, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 2,488 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-204ENST00000545686 OPN1MW2P0DN77 364 aa7.5□□□□□ -1.21
TDP1-204ENST00000545686 OPN1MW3P0DN78 364 aa7.5□□□□□ -1.21
TDP1-204ENST00000545686 F2RP25116 425 aa7.5□□□□□ -1.21
TDP1-204ENST00000545686 GPX4P36969 197 aaPredicted RBP7.5□□□□□ -1.21
TDP1-204ENST00000545686 PRSS12P56730 875 aa7.5□□□□□ -1.21
TDP1-204ENST00000545686 CCL7P80098 99 aa7.5□□□□□ -1.21
TDP1-204ENST00000545686 HERPUD1Q15011 391 aa7.5□□□□□ -1.21
TDP1-204ENST00000545686 OR2T2Q6IF00 324 aa7.5□□□□□ -1.21
TDP1-204ENST00000545686 GGNQ86UU5 652 aa7.5□□□□□ -1.21
TDP1-204ENST00000545686 JSRP1Q96MG2 331 aaPredicted RBP7.5□□□□□ -1.21
TDP1-204ENST00000545686 PARD6GQ9BYG4 376 aaPredicted RBP7.5□□□□□ -1.21
TDP1-204ENST00000545686 CA14Q9ULX7 337 aa7.5□□□□□ -1.21
TDP1-204ENST00000545686 CEP290O15078 2479 aa7.5□□□□□ -1.21
TDP1-204ENST00000545686 NDUFS6O75380 124 aaKnown RBP7.5□□□□□ -1.21
TDP1-204ENST00000545686 PGLYRP1O75594 196 aaPredicted RBP7.5□□□□□ -1.21
TDP1-204ENST00000545686 CNOT4O95628 575 aaKnown RBP7.5□□□□□ -1.21
TDP1-204ENST00000545686 CELA2AP08217 269 aa7.5□□□□□ -1.21
TDP1-204ENST00000545686 SCTP09683 121 aa7.5□□□□□ -1.21
TDP1-204ENST00000545686 TRGC1P0CF51 173 aa7.5□□□□□ -1.21
TDP1-204ENST00000545686 BCL3P20749 454 aa7.5□□□□□ -1.21
TDP1-204ENST00000545686 CARD18P57730 90 aa7.5□□□□□ -1.21
TDP1-204ENST00000545686 PKIAP61925 76 aa7.5□□□□□ -1.21
TDP1-204ENST00000545686 RAB11AP62491 216 aa7.5□□□□□ -1.21
TDP1-204ENST00000545686 SERF2P84101 59 aa7.5□□□□□ -1.21
TDP1-204ENST00000545686 IL11RAQ14626 422 aa7.5□□□□□ -1.21
TDP1-204ENST00000545686 PDCD1Q15116 288 aa7.5□□□□□ -1.21
TDP1-204ENST00000545686 CEACAM16Q2WEN9 425 aa7.5□□□□□ -1.21
TDP1-204ENST00000545686 ZNF787Q6DD87 383 aa7.5□□□□□ -1.21
TDP1-204ENST00000545686 SLC25A24Q6NUK1 477 aa7.5□□□□□ -1.21
TDP1-204ENST00000545686 DBX2Q6ZNG2 339 aa7.5□□□□□ -1.21
TDP1-204ENST00000545686 THNSL2Q86YJ6 484 aa7.5□□□□□ -1.21
TDP1-204ENST00000545686 OR5R1Q8NH85 324 aa7.5□□□□□ -1.21
TDP1-204ENST00000545686 NAT6Q93015 286 aa7.5□□□□□ -1.21
TDP1-204ENST00000545686 PLK3Q9H4B4 646 aa7.5□□□□□ -1.21
TDP1-204ENST00000545686 GPR35Q9HC97 309 aa7.5□□□□□ -1.21
TDP1-204ENST00000545686 CCL28Q9NRJ3 127 aa7.5□□□□□ -1.21
TDP1-204ENST00000545686 GNG13Q9P2W3 67 aa7.5□□□□□ -1.21
TDP1-204ENST00000545686 LY6G6EA0A0G2JKS1 128 aa7.49□□□□□ -1.21
TDP1-204ENST00000545686 PHOX2AO14813 284 aa7.49□□□□□ -1.21
TDP1-204ENST00000545686 IFNA1P01562 189 aa7.49□□□□□ -1.21
TDP1-204ENST00000545686 UMODP07911 640 aa7.49□□□□□ -1.21
TDP1-204ENST00000545686 EPHA8P29322 1005 aaPredicted RBP7.49□□□□□ -1.21
TDP1-204ENST00000545686 NTF4P34130 210 aa7.49□□□□□ -1.21
TDP1-204ENST00000545686 MLF1P58340 268 aa7.49□□□□□ -1.21
TDP1-204ENST00000545686 MKXQ8IYA7 352 aa7.49□□□□□ -1.21
TDP1-204ENST00000545686 ZNF295-AS1Q8N0V1 137 aa7.49□□□□□ -1.21
TDP1-204ENST00000545686 SCGB1C1Q8TD33 95 aa7.49□□□□□ -1.21
TDP1-204ENST00000545686 CA5BP1Q8WTZ4 195 aa7.49□□□□□ -1.21
TDP1-204ENST00000545686 FRZBQ92765 325 aa7.49□□□□□ -1.21
TDP1-204ENST00000545686 LSM10Q969L4 123 aaKnown RBP7.49□□□□□ -1.21
TDP1-204ENST00000545686 SGCZQ96LD1 299 aa7.49□□□□□ -1.21
TDP1-204ENST00000545686 AGMATQ9BSE5 352 aa7.49□□□□□ -1.21
TDP1-204ENST00000545686 GPR61Q9BZJ8 451 aa7.49□□□□□ -1.21
TDP1-204ENST00000545686 SDF2L1Q9HCN8 221 aa7.49□□□□□ -1.21
TDP1-204ENST00000545686 UFSP2Q9NUQ7 469 aa7.49□□□□□ -1.21
TDP1-204ENST00000545686 PITPNC1Q9UKF7 332 aa7.49□□□□□ -1.21
TDP1-204ENST00000545686 U3KQA8 63 aa7.49□□□□□ -1.21
TDP1-204ENST00000545686 KIAA2026Q5HYC2 2103 aa7.49□□□□□ -1.21
TDP1-204ENST00000545686 IGKV1-6A0A0C4DH72 117 aa7.49□□□□□ -1.21
TDP1-204ENST00000545686 KIAA1324LA8MWY0 1029 aaPredicted RBP7.49□□□□□ -1.21
TDP1-204ENST00000545686 TSTD3H0UI37 97 aa7.49□□□□□ -1.21
TDP1-204ENST00000545686 KLK3P07288 261 aaPredicted RBP7.49□□□□□ -1.21
TDP1-204ENST00000545686 PATE4P0C8F1 98 aa7.49□□□□□ -1.21
TDP1-204ENST00000545686 RPS18P62269 152 aaKnown RBP7.49□□□□□ -1.21
TDP1-204ENST00000545686 CDPF1Q6NVV7 123 aa7.49□□□□□ -1.21
TDP1-204ENST00000545686 P4HA3Q7Z4N8 544 aa7.49□□□□□ -1.21
TDP1-204ENST00000545686 MRGPRGQ86SM5 289 aa7.49□□□□□ -1.21
TDP1-204ENST00000545686 RPS19BP1Q86WX3 136 aaKnown RBP7.49□□□□□ -1.21
TDP1-204ENST00000545686 FGFBP3Q8TAT2 258 aa7.49□□□□□ -1.21
TDP1-204ENST00000545686 ABHD5Q8WTS1 349 aa7.49□□□□□ -1.21
TDP1-204ENST00000545686 TMEM45BQ96B21 275 aa7.49□□□□□ -1.21
TDP1-204ENST00000545686 PINX1Q96BK5 328 aaKnown RBP7.49□□□□□ -1.21
TDP1-204ENST00000545686 ADGRG7Q96K78 797 aa7.49□□□□□ -1.21
TDP1-204ENST00000545686 CABLES2Q9BTV7 478 aa7.49□□□□□ -1.21
TDP1-204ENST00000545686 REPIN1Q9BWE0 567 aaKnown RBP7.49□□□□□ -1.21
TDP1-204ENST00000545686 CDH20Q9HBT6 801 aa7.49□□□□□ -1.21
TDP1-204ENST00000545686 RPRMQ9NS64 109 aa7.49□□□□□ -1.21
TDP1-204ENST00000545686 VAX2Q9UIW0 290 aa7.49□□□□□ -1.21
TDP1-204ENST00000545686 OR2W1Q9Y3N9 320 aa7.49□□□□□ -1.21
TDP1-204ENST00000545686 NPIPB11E5RHQ5 1161 aa7.48□□□□□ -1.21
TDP1-204ENST00000545686 TRAPPC2LH3BP13 241 aa7.48□□□□□ -1.21
TDP1-204ENST00000545686 RD3LP0DJH9 198 aa7.48□□□□□ -1.21
TDP1-204ENST00000545686 PAX1P15863 534 aa7.48□□□□□ -1.21
TDP1-204ENST00000545686 HBG1P69891 147 aa7.48□□□□□ -1.21
TDP1-204ENST00000545686 HBG2P69892 147 aa7.48□□□□□ -1.21
TDP1-204ENST00000545686 ZFP36L1Q07352 338 aaKnown RBP7.48□□□□□ -1.21
TDP1-204ENST00000545686 PRDX4Q13162 271 aa7.48□□□□□ -1.21
TDP1-204ENST00000545686 ESPL1Q14674 2120 aa7.48□□□□□ -1.21
TDP1-204ENST00000545686 CEACAM21Q3KPI0 293 aa7.48□□□□□ -1.21
TDP1-204ENST00000545686 CDCP2Q5VXM1 449 aa7.48□□□□□ -1.21
TDP1-204ENST00000545686 ZNF880Q6PDB4 577 aa7.48□□□□□ -1.21
TDP1-204ENST00000545686 PCSK4Q6UW60 755 aa7.48□□□□□ -1.21
TDP1-204ENST00000545686 REC114Q7Z4M0 266 aa7.48□□□□□ -1.21
TDP1-204ENST00000545686 ZDHHC23Q8IYP9 409 aa7.48□□□□□ -1.21
TDP1-204ENST00000545686 OR56B2PQ8NGI1 322 aa7.48□□□□□ -1.21
TDP1-204ENST00000545686 S100PBPQ96BU1 408 aa7.48□□□□□ -1.21
TDP1-204ENST00000545686 GPR146Q96CH1 333 aa7.48□□□□□ -1.21
TDP1-204ENST00000545686 C14orf144Q96I85 54 aa7.48□□□□□ -1.21
TDP1-204ENST00000545686 ZNF665Q9H7R5 613 aa7.48□□□□□ -1.21
TDP1-204ENST00000545686 AKIRIN1Q9H9L7 192 aaPredicted RBP7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms