RNA–Protein interactions for RNA: ENST00000545308.5

SNHG1-222, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 646 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-222ENST00000545308 TMEM27Q9HBJ8 222 aa2.66□□□□□ -1.98
SNHG1-222ENST00000545308 LRTM1Q9HBL6 345 aa2.66□□□□□ -1.98
SNHG1-222ENST00000545308 VCX3AQ9NNX9 186 aa2.66□□□□□ -1.98
SNHG1-222ENST00000545308 CLEC2DQ9UHP7 191 aa2.66□□□□□ -1.98
SNHG1-222ENST00000545308 TSSC4Q9Y5U2 329 aaPredicted RBP2.66□□□□□ -1.98
SNHG1-222ENST00000545308 STAB1Q9NY15 2570 aa2.66□□□□□ -1.98
SNHG1-222ENST00000545308 C1orf232A0A0U1RR37 186 aa2.65□□□□□ -1.99
SNHG1-222ENST00000545308 A0A1B0GX78 115 aa2.65□□□□□ -1.99
SNHG1-222ENST00000545308 WI2-2373I1.2A0A1W2PRP0 233 aa2.65□□□□□ -1.99
SNHG1-222ENST00000545308 PINLYPA6NC86 204 aa2.65□□□□□ -1.99
SNHG1-222ENST00000545308 SIGLEC16A6NMB1 481 aa2.65□□□□□ -1.99
SNHG1-222ENST00000545308 TRIM49D1C9J1S8 452 aa2.65□□□□□ -1.99
SNHG1-222ENST00000545308 LINC01619G3V211 115 aa2.65□□□□□ -1.99
SNHG1-222ENST00000545308 H0Y9J4 135 aa2.65□□□□□ -1.99
SNHG1-222ENST00000545308 TXNDC9O14530 226 aa2.65□□□□□ -1.99
SNHG1-222ENST00000545308 ANGPTL7O43827 346 aa2.65□□□□□ -1.99
SNHG1-222ENST00000545308 POP7O75817 140 aaKnown RBP2.65□□□□□ -1.99
SNHG1-222ENST00000545308 SEMA3DO95025 777 aa2.65□□□□□ -1.99
SNHG1-222ENST00000545308 CALB1P05937 261 aa2.65□□□□□ -1.99
SNHG1-222ENST00000545308 GABRA1P14867 456 aa2.65□□□□□ -1.99
SNHG1-222ENST00000545308 SYT1P21579 422 aa2.65□□□□□ -1.99
SNHG1-222ENST00000545308 MYL9P24844 172 aa2.65□□□□□ -1.99
SNHG1-222ENST00000545308 LOXP28300 417 aaPredicted RBP2.65□□□□□ -1.99
SNHG1-222ENST00000545308 POLR2IP36954 125 aaKnown RBP2.65□□□□□ -1.99
SNHG1-222ENST00000545308 STC1P52823 247 aa2.65□□□□□ -1.99
SNHG1-222ENST00000545308 DYNC1I2Q13409 638 aaKnown RBP2.65□□□□□ -1.99
SNHG1-222ENST00000545308 MAD2L1BPQ15013 274 aaPredicted RBP2.65□□□□□ -1.99
SNHG1-222ENST00000545308 RBMY1FQ15415 496 aaKnown RBP2.65□□□□□ -1.99
SNHG1-222ENST00000545308 TAL2Q16559 108 aa2.65□□□□□ -1.99
SNHG1-222ENST00000545308 EXOC3L4Q17RC7 722 aa2.65□□□□□ -1.99
SNHG1-222ENST00000545308 ZCWPW2Q504Y3 356 aa2.65□□□□□ -1.99
SNHG1-222ENST00000545308 HENMT1Q5T8I9 393 aaKnown RBP2.65□□□□□ -1.99
SNHG1-222ENST00000545308 EPGNQ6UW88 154 aa2.65□□□□□ -1.99
SNHG1-222ENST00000545308 SLC13A5Q86YT5 568 aaPredicted RBP2.65□□□□□ -1.99
SNHG1-222ENST00000545308 TRAPPC5Q8IUR0 188 aa2.65□□□□□ -1.99
SNHG1-222ENST00000545308 OR11G2Q8NGC1 345 aa2.65□□□□□ -1.99
SNHG1-222ENST00000545308 OR4E2Q8NGC2 313 aa2.65□□□□□ -1.99
SNHG1-222ENST00000545308 OR6N2Q8NGY6 317 aa2.65□□□□□ -1.99
SNHG1-222ENST00000545308 SGMS2Q8NHU3 365 aa2.65□□□□□ -1.99
SNHG1-222ENST00000545308 FAM57AQ8TBR7 257 aa2.65□□□□□ -1.99
SNHG1-222ENST00000545308 LGALS14Q8TCE9 139 aa2.65□□□□□ -1.99
SNHG1-222ENST00000545308 FAM172AQ8WUF8 416 aa2.65□□□□□ -1.99
SNHG1-222ENST00000545308 RXFP2Q8WXD0 754 aa2.65□□□□□ -1.99
SNHG1-222ENST00000545308 TM4SF18Q96CE8 201 aa2.65□□□□□ -1.99
SNHG1-222ENST00000545308 ZMYND19Q96E35 227 aaPredicted RBP2.65□□□□□ -1.99
SNHG1-222ENST00000545308 ATP6V1G3Q96LB4 118 aa2.65□□□□□ -1.99
SNHG1-222ENST00000545308 KCNS3Q9BQ31 491 aa2.65□□□□□ -1.99
SNHG1-222ENST00000545308 FRMD8P1Q9BZ68 369 aaPredicted RBP2.65□□□□□ -1.99
SNHG1-222ENST00000545308 IFI27L2Q9H2X8 130 aa2.65□□□□□ -1.99
SNHG1-222ENST00000545308 RPP21Q9H633 154 aaKnown RBP2.65□□□□□ -1.99
SNHG1-222ENST00000545308 LRRC19Q9H756 370 aa2.65□□□□□ -1.99
SNHG1-222ENST00000545308 C12orf10Q9HB07 376 aa2.65□□□□□ -1.99
SNHG1-222ENST00000545308 CTSFQ9UBX1 484 aa2.65□□□□□ -1.99
SNHG1-222ENST00000545308 DNAJC12Q9UKB3 198 aa2.65□□□□□ -1.99
SNHG1-222ENST00000545308 SNX10Q9Y5X0 201 aa2.65□□□□□ -1.99
SNHG1-222ENST00000545308 SONP18583 2426 aaKnown RBP2.65□□□□□ -1.99
SNHG1-222ENST00000545308 ZNF407Q9C0G0 2248 aa2.65□□□□□ -1.99
SNHG1-222ENST00000545308 SNRNP200O75643 2136 aaKnown RBP2.65□□□□□ -1.99
SNHG1-222ENST00000545308 FREM3P0C091 2139 aa2.65□□□□□ -1.99
SNHG1-222ENST00000545308 HEATR5BQ9P2D3 2071 aa2.64□□□□□ -1.99
SNHG1-222ENST00000545308 YLPM1P49750 1951 aaKnown RBP2.64□□□□□ -1.99
SNHG1-222ENST00000545308 IGKV1-27A0A075B6S5 117 aa2.64□□□□□ -1.99
SNHG1-222ENST00000545308 TRAV8-7A0A075B6U6 113 aa2.64□□□□□ -1.99
SNHG1-222ENST00000545308 A0A096LNJ9 63 aa2.64□□□□□ -1.99
SNHG1-222ENST00000545308 A0A1B0GW15 77 aa2.64□□□□□ -1.99
SNHG1-222ENST00000545308 ANKRD20A5PA0PJZ0 165 aa2.64□□□□□ -1.99
SNHG1-222ENST00000545308 GOLGA6L4A6NEF3 574 aa2.64□□□□□ -1.99
SNHG1-222ENST00000545308 MGAT4DA6NG13 374 aa2.64□□□□□ -1.99
SNHG1-222ENST00000545308 ALOX12BO75342 701 aa2.64□□□□□ -1.99
SNHG1-222ENST00000545308 GCM2O75603 506 aaPredicted RBP2.64□□□□□ -1.99
SNHG1-222ENST00000545308 SOD1P00441 154 aa2.64□□□□□ -1.99
SNHG1-222ENST00000545308 PSG2P11465 335 aa2.64□□□□□ -1.99
SNHG1-222ENST00000545308 ZNF823P16415 610 aa2.64□□□□□ -1.99
SNHG1-222ENST00000545308 CASP1P29466 404 aa2.64□□□□□ -1.99
SNHG1-222ENST00000545308 KIR3DL2P43630 455 aa2.64□□□□□ -1.99
SNHG1-222ENST00000545308 GALR1P47211 349 aa2.64□□□□□ -1.99
SNHG1-222ENST00000545308 KCNJ3P48549 501 aa2.64□□□□□ -1.99
SNHG1-222ENST00000545308 EMP2P54851 167 aa2.64□□□□□ -1.99
SNHG1-222ENST00000545308 MLF1P58340 268 aa2.64□□□□□ -1.99
SNHG1-222ENST00000545308 RPL23P62829 140 aaKnown RBP2.64□□□□□ -1.99
SNHG1-222ENST00000545308 TFF3Q07654 80 aa2.64□□□□□ -1.99
SNHG1-222ENST00000545308 ST3GAL4Q11206 333 aa2.64□□□□□ -1.99
SNHG1-222ENST00000545308 OR1Q1Q15612 314 aa2.64□□□□□ -1.99
SNHG1-222ENST00000545308 PSG3Q16557 428 aa2.64□□□□□ -1.99
SNHG1-222ENST00000545308 CCDC122Q5T0U0 273 aa2.64□□□□□ -1.99
SNHG1-222ENST00000545308 DCUN1D2Q6PH85 259 aa2.64□□□□□ -1.99
SNHG1-222ENST00000545308 SCIMPQ6UWF3 145 aa2.64□□□□□ -1.99
SNHG1-222ENST00000545308 SLC30A8Q8IWU4 369 aa2.64□□□□□ -1.99
SNHG1-222ENST00000545308 MKXQ8IYA7 352 aa2.64□□□□□ -1.99
SNHG1-222ENST00000545308 SYCE1Q8N0S2 351 aa2.64□□□□□ -1.99
SNHG1-222ENST00000545308 WFDC11Q8NEX6 87 aa2.64□□□□□ -1.99
SNHG1-222ENST00000545308 CDKL2Q92772 493 aa2.64□□□□□ -1.99
SNHG1-222ENST00000545308 NAPGQ99747 312 aaPredicted RBP2.64□□□□□ -1.99
SNHG1-222ENST00000545308 SMR3AQ99954 134 aa2.64□□□□□ -1.99
SNHG1-222ENST00000545308 ARV1Q9H2C2 271 aa2.64□□□□□ -1.99
SNHG1-222ENST00000545308 TPK1Q9H3S4 243 aa2.64□□□□□ -1.99
SNHG1-222ENST00000545308 TRABDQ9H4I3 376 aa2.64□□□□□ -1.99
SNHG1-222ENST00000545308 WFDC1Q9HC57 220 aa2.64□□□□□ -1.99
SNHG1-222ENST00000545308 TREX1Q9NSU2 369 aa2.64□□□□□ -1.99
SNHG1-222ENST00000545308 IMP3Q9NV31 184 aaKnown RBP2.64□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 229.4 ms