RNA–Protein interactions for RNA: ENST00000545046.5

CHFR-224, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 2,186 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-224ENST00000545046 OR1S1Q8NH92 325 aa14.03□□□□□ -0.16
CHFR-224ENST00000545046 RRNAD1Q96FB5 475 aaKnown RBP14.03□□□□□ -0.16
CHFR-224ENST00000545046 USB1Q9BQ65 265 aaKnown RBP14.03□□□□□ -0.16
CHFR-224ENST00000545046 TMEM222Q9H0R3 208 aa14.03□□□□□ -0.16
CHFR-224ENST00000545046 CCL28Q9NRJ3 127 aa14.03□□□□□ -0.16
CHFR-224ENST00000545046 ELOVL5Q9NYP7 299 aa14.03□□□□□ -0.16
CHFR-224ENST00000545046 ZNF835Q9Y2P0 537 aa14.03□□□□□ -0.16
CHFR-224ENST00000545046 CHD3Q12873 2000 aaKnown RBP14.03□□□□□ -0.16
CHFR-224ENST00000545046 TRAV39A0A0B4J263 110 aa14.03□□□□□ -0.16
CHFR-224ENST00000545046 NPIPB11E5RHQ5 1161 aa14.03□□□□□ -0.16
CHFR-224ENST00000545046 CD200P41217 278 aa14.03□□□□□ -0.16
CHFR-224ENST00000545046 UCNP55089 124 aa14.03□□□□□ -0.16
CHFR-224ENST00000545046 NKX6-1P78426 367 aaPredicted RBP14.03□□□□□ -0.16
CHFR-224ENST00000545046 RBPJQ06330 500 aa14.03□□□□□ -0.16
CHFR-224ENST00000545046 SMIM21Q3B7S5 101 aa14.03□□□□□ -0.16
CHFR-224ENST00000545046 VHLLQ6RSH7 139 aa14.03□□□□□ -0.16
CHFR-224ENST00000545046 MEX3BQ6ZN04 569 aaKnown RBP14.03□□□□□ -0.16
CHFR-224ENST00000545046 PRR7Q8TB68 274 aa14.03□□□□□ -0.16
CHFR-224ENST00000545046 SH3BGRL2Q9UJC5 107 aa14.03□□□□□ -0.16
CHFR-224ENST00000545046 ERRFI1Q9UJM3 462 aaPredicted RBP14.03□□□□□ -0.16
CHFR-224ENST00000545046 TMED3Q9Y3Q3 217 aa14.03□□□□□ -0.16
CHFR-224ENST00000545046 TMEM30CPA0ZSE6 113 aa14.02□□□□□ -0.16
CHFR-224ENST00000545046 C1QTNF9BB2RNN3 333 aa14.02□□□□□ -0.16
CHFR-224ENST00000545046 RRASP10301 218 aa14.02□□□□□ -0.16
CHFR-224ENST00000545046 SELENOVP59797 346 aa14.02□□□□□ -0.16
CHFR-224ENST00000545046 MSMPQ1L6U9 139 aa14.02□□□□□ -0.16
CHFR-224ENST00000545046 PRR18Q8N4B5 295 aa14.02□□□□□ -0.16
CHFR-224ENST00000545046 PHYHIPLQ96FC7 376 aa14.02□□□□□ -0.16
CHFR-224ENST00000545046 AQP10Q96PS8 301 aa14.02□□□□□ -0.16
CHFR-224ENST00000545046 MBNL3Q9NUK0 354 aaKnown RBP14.02□□□□□ -0.16
CHFR-224ENST00000545046 ASF1BQ9NVP2 202 aa14.02□□□□□ -0.16
CHFR-224ENST00000545046 KCNIP1Q9NZI2 227 aa14.02□□□□□ -0.16
CHFR-224ENST00000545046 HSPA12AO43301 675 aa14.02□□□□□ -0.17
CHFR-224ENST00000545046 SCGB1D2O95969 90 aa14.02□□□□□ -0.17
CHFR-224ENST00000545046 NMBP08949 121 aa14.02□□□□□ -0.17
CHFR-224ENST00000545046 FAM87AP0C7U9 286 aa14.02□□□□□ -0.17
CHFR-224ENST00000545046 TMEM268Q5VZI3 342 aa14.02□□□□□ -0.17
CHFR-224ENST00000545046 SLC35E4Q6ICL7 350 aa14.02□□□□□ -0.17
CHFR-224ENST00000545046 ZNF695Q8IW36 515 aa14.02□□□□□ -0.17
CHFR-224ENST00000545046 PDZD9Q8IXQ8 264 aa14.02□□□□□ -0.17
CHFR-224ENST00000545046 LRRC29Q8WV35 223 aa14.02□□□□□ -0.17
CHFR-224ENST00000545046 SLC25A32Q9H2D1 315 aa14.02□□□□□ -0.17
CHFR-224ENST00000545046 ZFP57Q9NU63 452 aa14.02□□□□□ -0.17
CHFR-224ENST00000545046 LSM5Q9Y4Y9 91 aaKnown RBP14.02□□□□□ -0.17
CHFR-224ENST00000545046 LAMA5O15230 3695 aa14.01□□□□□ -0.17
CHFR-224ENST00000545046 ATP6V1G2-DDX39BF2Z307 99 aa14.01□□□□□ -0.17
CHFR-224ENST00000545046 C16orf97H3BN30 126 aa14.01□□□□□ -0.17
CHFR-224ENST00000545046 IFNL4K9M1U5 179 aa14.01□□□□□ -0.17
CHFR-224ENST00000545046 PSPNO60542 156 aa14.01□□□□□ -0.17
CHFR-224ENST00000545046 FAM219AQ8IW50 185 aa14.01□□□□□ -0.17
CHFR-224ENST00000545046 SLC35G3Q8N808 338 aa14.01□□□□□ -0.17
CHFR-224ENST00000545046 OR10V1Q8NGI7 309 aa14.01□□□□□ -0.17
CHFR-224ENST00000545046 LHFPL5Q8TAF8 219 aa14.01□□□□□ -0.17
CHFR-224ENST00000545046 TAF9BQ9HBM6 251 aa14.01□□□□□ -0.17
CHFR-224ENST00000545046 ZC4H2Q9NQZ6 224 aa14.01□□□□□ -0.17
CHFR-224ENST00000545046 OR1A1Q9P1Q5 309 aa14.01□□□□□ -0.17
CHFR-224ENST00000545046 DEDDO75618 318 aa14□□□□□ -0.17
CHFR-224ENST00000545046 HMGN3Q15651 99 aa14□□□□□ -0.17
CHFR-224ENST00000545046 OR10Z1Q8NGY1 313 aa14□□□□□ -0.17
CHFR-224ENST00000545046 TMEM171Q8WVE6 324 aa14□□□□□ -0.17
CHFR-224ENST00000545046 TMEM56Q96MV1 263 aa14□□□□□ -0.17
CHFR-224ENST00000545046 TMEM56-RWDD3S4R434 201 aa14□□□□□ -0.17
CHFR-224ENST00000545046 IGLV3-9A0A075B6K5 115 aa14□□□□□ -0.17
CHFR-224ENST00000545046 MSGN1A6NI15 193 aa14□□□□□ -0.17
CHFR-224ENST00000545046 PTBP3O95758 552 aaKnown RBP14□□□□□ -0.17
CHFR-224ENST00000545046 TPT1P13693 172 aaKnown RBP14□□□□□ -0.17
CHFR-224ENST00000545046 CD40P25942 277 aa14□□□□□ -0.17
CHFR-224ENST00000545046 BVESQ8NE79 360 aa14□□□□□ -0.17
CHFR-224ENST00000545046 RBM7Q9Y580 266 aaKnown RBP14□□□□□ -0.17
CHFR-224ENST00000545046 DMXL2Q8TDJ6 3036 aa14□□□□□ -0.17
CHFR-224ENST00000545046 A0A1B0GW55 424 aa13.99□□□□□ -0.17
CHFR-224ENST00000545046 ZSCAN5BA6NJL1 495 aa13.99□□□□□ -0.17
CHFR-224ENST00000545046 PGLYRP1O75594 196 aaPredicted RBP13.99□□□□□ -0.17
CHFR-224ENST00000545046 DUX4L2P0CJ85 424 aa13.99□□□□□ -0.17
CHFR-224ENST00000545046 DUX4L3P0CJ86 424 aa13.99□□□□□ -0.17
CHFR-224ENST00000545046 DUX4L4P0CJ87 422 aa13.99□□□□□ -0.17
CHFR-224ENST00000545046 DUX4L5P0CJ88 424 aa13.99□□□□□ -0.17
CHFR-224ENST00000545046 DUX4L6P0CJ89 424 aa13.99□□□□□ -0.17
CHFR-224ENST00000545046 DUX4L7P0CJ90 424 aa13.99□□□□□ -0.17
CHFR-224ENST00000545046 COL10A1Q03692 680 aa13.99□□□□□ -0.17
CHFR-224ENST00000545046 PRR30Q53SZ7 412 aaPredicted RBP13.99□□□□□ -0.17
CHFR-224ENST00000545046 TMEM108Q6UXF1 575 aa13.99□□□□□ -0.17
CHFR-224ENST00000545046 C22orf34Q6ZV56 151 aa13.99□□□□□ -0.17
CHFR-224ENST00000545046 STOML3Q8TAV4 291 aa13.99□□□□□ -0.17
CHFR-224ENST00000545046 SHARPINQ9H0F6 387 aa13.99□□□□□ -0.17
CHFR-224ENST00000545046 DUX4Q9UBX2 424 aa13.99□□□□□ -0.17
CHFR-224ENST00000545046 PFDN2Q9UHV9 154 aa13.99□□□□□ -0.17
CHFR-224ENST00000545046 KIAA2026Q5HYC2 2103 aa13.99□□□□□ -0.17
CHFR-224ENST00000545046 DUXBA0A1W2PPF3 345 aa13.99□□□□□ -0.17
CHFR-224ENST00000545046 TNFSF12O43508 249 aa13.99□□□□□ -0.17
CHFR-224ENST00000545046 MBPP02686 304 aaPredicted RBP13.99□□□□□ -0.17
CHFR-224ENST00000545046 RPL12P30050 165 aaKnown RBP13.99□□□□□ -0.17
CHFR-224ENST00000545046 AESQ08117 197 aa13.99□□□□□ -0.17
CHFR-224ENST00000545046 SELENOHQ8IZQ5 122 aaKnown RBP13.99□□□□□ -0.17
CHFR-224ENST00000545046 RELL2Q8NC24 303 aaPredicted RBP13.99□□□□□ -0.17
CHFR-224ENST00000545046 GALNT11Q8NCW6 608 aa13.99□□□□□ -0.17
CHFR-224ENST00000545046 LILRB1Q8NHL6 650 aaPredicted RBP13.99□□□□□ -0.17
CHFR-224ENST00000545046 OR2V2Q96R30 315 aa13.99□□□□□ -0.17
CHFR-224ENST00000545046 MED9Q9NWA0 146 aa13.99□□□□□ -0.17
CHFR-224ENST00000545046 RAXQ9Y2V3 346 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms