RNA–Protein interactions for RNA: ENST00000544363.5

CCM2-219, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,620 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-219ENST00000544363 BET1O15155 118 aa25.34■■□□□ 1.65
CCM2-219ENST00000544363 KCNJ8Q15842 424 aa25.34■■□□□ 1.65
CCM2-219ENST00000544363 CHAC2Q8WUX2 184 aa25.34■■□□□ 1.65
CCM2-219ENST00000544363 CLEC4MQ9H2X3 399 aaPredicted RBP25.34■■□□□ 1.65
CCM2-219ENST00000544363 GPR132Q9UNW8 380 aa25.34■■□□□ 1.65
CCM2-219ENST00000544363 TMPRSS2O15393 492 aa25.34■■□□□ 1.65
CCM2-219ENST00000544363 FSTL3O95633 263 aa25.34■■□□□ 1.65
CCM2-219ENST00000544363 VSIG10L2P0DP72 767 aa25.34■■□□□ 1.65
CCM2-219ENST00000544363 FPR2P25090 351 aa25.34■■□□□ 1.65
CCM2-219ENST00000544363 CDKN1AP38936 164 aa25.34■■□□□ 1.65
CCM2-219ENST00000544363 ECI1P42126 302 aa25.34■■□□□ 1.65
CCM2-219ENST00000544363 GLDNQ6ZMI3 551 aaPredicted RBP25.34■■□□□ 1.65
CCM2-219ENST00000544363 TMED4Q7Z7H5 227 aa25.34■■□□□ 1.65
CCM2-219ENST00000544363 PEG10Q86TG7 708 aaKnown RBP25.34■■□□□ 1.65
CCM2-219ENST00000544363 NCOR1P1Q9H4R4 102 aa25.34■■□□□ 1.65
CCM2-219ENST00000544363 PLEKHF2Q9H8W4 249 aa25.34■■□□□ 1.65
CCM2-219ENST00000544363 SPTAN1Q13813 2472 aaKnown RBP25.34■■□□□ 1.65
CCM2-219ENST00000544363 ODAMA1E959 279 aa25.33■■□□□ 1.65
CCM2-219ENST00000544363 ERP29P30040 261 aaKnown RBP25.33■■□□□ 1.65
CCM2-219ENST00000544363 P2RX3P56373 397 aa25.33■■□□□ 1.65
CCM2-219ENST00000544363 SURF2Q15527 256 aaPredicted RBP25.33■■□□□ 1.65
CCM2-219ENST00000544363 C6orf183Q5T699 404 aa25.33■■□□□ 1.65
CCM2-219ENST00000544363 METTL11BQ5VVY1 283 aa25.33■■□□□ 1.65
CCM2-219ENST00000544363 SP5Q6BEB4 398 aaPredicted RBP25.33■■□□□ 1.65
CCM2-219ENST00000544363 KIRREL1Q96J84 757 aa25.33■■□□□ 1.65
CCM2-219ENST00000544363 A1L4Q6 167 aa25.32■■□□□ 1.64
CCM2-219ENST00000544363 NDUFA2O43678 99 aa25.32■■□□□ 1.64
CCM2-219ENST00000544363 COX6B1P14854 86 aa25.32■■□□□ 1.64
CCM2-219ENST00000544363 DAOP14920 347 aa25.32■■□□□ 1.64
CCM2-219ENST00000544363 NFYAP23511 347 aaPredicted RBP25.32■■□□□ 1.64
CCM2-219ENST00000544363 OR13A1Q8NGR1 328 aa25.32■■□□□ 1.64
CCM2-219ENST00000544363 MRGPRDQ8TDS7 321 aa25.32■■□□□ 1.64
CCM2-219ENST00000544363 DACT3Q96B18 629 aaPredicted RBP25.32■■□□□ 1.64
CCM2-219ENST00000544363 LURAP1Q96LR2 239 aa25.32■■□□□ 1.64
CCM2-219ENST00000544363 TMEM246Q9BRR3 403 aa25.32■■□□□ 1.64
CCM2-219ENST00000544363 COL12A1Q99715 3063 aa25.31■■□□□ 1.64
CCM2-219ENST00000544363 TRBV6-7A0A0A0MS04 114 aa25.31■■□□□ 1.64
CCM2-219ENST00000544363 J3QKU1 62 aa25.31■■□□□ 1.64
CCM2-219ENST00000544363 LY6HO94772 140 aa25.31■■□□□ 1.64
CCM2-219ENST00000544363 EDDM3BP56851 147 aa25.31■■□□□ 1.64
CCM2-219ENST00000544363 CBX3Q13185 183 aa25.31■■□□□ 1.64
CCM2-219ENST00000544363 TRAT1Q6PIZ9 186 aa25.31■■□□□ 1.64
CCM2-219ENST00000544363 OR51J1Q9H342 316 aa25.31■■□□□ 1.64
CCM2-219ENST00000544363 LRBAP50851 2863 aa25.31■■□□□ 1.64
CCM2-219ENST00000544363 C12orf77C9JDV5 145 aa25.3■■□□□ 1.64
CCM2-219ENST00000544363 ZNF554Q86TJ5 538 aa25.3■■□□□ 1.64
CCM2-219ENST00000544363 SLC25A42Q86VD7 318 aa25.3■■□□□ 1.64
CCM2-219ENST00000544363 PRR18Q8N4B5 295 aa25.3■■□□□ 1.64
CCM2-219ENST00000544363 SEC22CQ9BRL7 303 aa25.3■■□□□ 1.64
CCM2-219ENST00000544363 GPN1Q9HCN4 374 aaPredicted RBP25.3■■□□□ 1.64
CCM2-219ENST00000544363 KAAG1Q9UBP8 84 aa25.3■■□□□ 1.64
CCM2-219ENST00000544363 ZNF221Q9UK13 617 aa25.3■■□□□ 1.64
CCM2-219ENST00000544363 ADAM20O43506 726 aa25.3■■□□□ 1.64
CCM2-219ENST00000544363 DIRAS3O95661 229 aa25.3■■□□□ 1.64
CCM2-219ENST00000544363 AADACP22760 399 aa25.3■■□□□ 1.64
CCM2-219ENST00000544363 CR1LQ2VPA4 569 aa25.3■■□□□ 1.64
CCM2-219ENST00000544363 LYPD2Q6UXB3 125 aa25.3■■□□□ 1.64
CCM2-219ENST00000544363 OR10J5Q8NHC4 309 aa25.3■■□□□ 1.64
CCM2-219ENST00000544363 CAPSLQ8WWF8 208 aa25.3■■□□□ 1.64
CCM2-219ENST00000544363 IL1F10Q8WWZ1 152 aa25.3■■□□□ 1.64
CCM2-219ENST00000544363 MOB3AQ96BX8 217 aa25.3■■□□□ 1.64
CCM2-219ENST00000544363 FXYD6Q9H0Q3 95 aa25.3■■□□□ 1.64
CCM2-219ENST00000544363 C5orf66Q9H5L9 145 aa25.3■■□□□ 1.64
CCM2-219ENST00000544363 HMX3A6NHT5 357 aa25.29■■□□□ 1.64
CCM2-219ENST00000544363 NPIPB11E5RHQ5 1161 aa25.29■■□□□ 1.64
CCM2-219ENST00000544363 PPYP01298 95 aa25.29■■□□□ 1.64
CCM2-219ENST00000544363 IGHV2-70P01814 119 aa25.29■■□□□ 1.64
CCM2-219ENST00000544363 PGAM2P15259 253 aa25.29■■□□□ 1.64
CCM2-219ENST00000544363 BAMBIQ13145 260 aa25.29■■□□□ 1.64
CCM2-219ENST00000544363 NEURL2Q9BR09 285 aa25.29■■□□□ 1.64
CCM2-219ENST00000544363 DCTN5Q9BTE1 182 aa25.29■■□□□ 1.64
CCM2-219ENST00000544363 OVOL3O00110 214 aa25.28■■□□□ 1.64
CCM2-219ENST00000544363 TUSC2O75896 110 aa25.28■■□□□ 1.64
CCM2-219ENST00000544363 OR4E1P0C645 316 aa25.28■■□□□ 1.64
CCM2-219ENST00000544363 GZMHP20718 246 aa25.28■■□□□ 1.64
CCM2-219ENST00000544363 HERV-K104P61576 105 aa25.28■■□□□ 1.64
CCM2-219ENST00000544363 KIAA2026Q5HYC2 2103 aa25.28■■□□□ 1.64
CCM2-219ENST00000544363 ZNF565Q8N9K5 539 aa25.28■■□□□ 1.64
CCM2-219ENST00000544363 ADAD2Q8NCV1 583 aaKnown RBP25.28■■□□□ 1.64
CCM2-219ENST00000544363 UBALD1Q8TB05 177 aa25.28■■□□□ 1.64
CCM2-219ENST00000544363 OR6C3Q9NZP0 311 aa25.28■■□□□ 1.64
CCM2-219ENST00000544363 SLC25A10Q9UBX3 287 aaPredicted RBP25.28■■□□□ 1.64
CCM2-219ENST00000544363 SNRPGP15A8MWD9 76 aa25.27■■□□□ 1.64
CCM2-219ENST00000544363 F12P00748 615 aaPredicted RBP25.27■■□□□ 1.64
CCM2-219ENST00000544363 HBZP02008 142 aa25.27■■□□□ 1.64
CCM2-219ENST00000544363 TRAPPC2P0DI81 140 aa25.27■■□□□ 1.64
CCM2-219ENST00000544363 TRAPPC2BP0DI82 140 aa25.27■■□□□ 1.64
CCM2-219ENST00000544363 FXYD4P59646 89 aa25.27■■□□□ 1.64
CCM2-219ENST00000544363 C4orf46Q504U0 113 aa25.27■■□□□ 1.64
CCM2-219ENST00000544363 H1FOOQ8IZA3 346 aaPredicted RBP25.27■■□□□ 1.64
CCM2-219ENST00000544363 OR1L1Q8NH94 360 aa25.27■■□□□ 1.64
CCM2-219ENST00000544363 GALMQ96C23 342 aa25.27■■□□□ 1.64
CCM2-219ENST00000544363 C14orf79Q96F83 325 aa25.27■■□□□ 1.64
CCM2-219ENST00000544363 RTBDNQ9BSG5 229 aaPredicted RBP25.27■■□□□ 1.64
CCM2-219ENST00000544363 SLC23A1Q9UHI7 598 aa25.27■■□□□ 1.64
CCM2-219ENST00000544363 OPN4Q9UHM6 478 aa25.27■■□□□ 1.64
CCM2-219ENST00000544363 ZNF728P0DKX0 622 aa25.26■■□□□ 1.63
CCM2-219ENST00000544363 UCP3P55916 312 aa25.26■■□□□ 1.63
CCM2-219ENST00000544363 TAS2R31P59538 309 aa25.26■■□□□ 1.63
CCM2-219ENST00000544363 RRAS2P62070 204 aaPredicted RBP25.26■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms