RNA–Protein interactions for RNA: ENST00000544246.5

PCDH9-204, Transcript of protocadherin 9, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PCDH9, Length 6,234 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-204ENST00000544246 CBLN2Q8IUK8 224 aa9.16□□□□□ -0.94
PCDH9-204ENST00000544246 OR4D9Q8NGE8 314 aa9.16□□□□□ -0.94
PCDH9-204ENST00000544246 PTPMT1Q8WUK0 201 aaPredicted RBP9.16□□□□□ -0.94
PCDH9-204ENST00000544246 GPA33Q99795 319 aa9.16□□□□□ -0.94
PCDH9-204ENST00000544246 MYH7P12883 1935 aa9.16□□□□□ -0.94
PCDH9-204ENST00000544246 IGKV3D-15A0A087WSY6 115 aa9.16□□□□□ -0.94
PCDH9-204ENST00000544246 B4E171 279 aa9.16□□□□□ -0.94
PCDH9-204ENST00000544246 IGKV3-15P01624 115 aa9.16□□□□□ -0.94
PCDH9-204ENST00000544246 HOXC4P09017 264 aaPredicted RBP9.16□□□□□ -0.94
PCDH9-204ENST00000544246 APELAP0DMC3 54 aa9.16□□□□□ -0.94
PCDH9-204ENST00000544246 RPS4XP62701 263 aaKnown RBP9.16□□□□□ -0.94
PCDH9-204ENST00000544246 HYAL1Q12794 435 aa9.16□□□□□ -0.94
PCDH9-204ENST00000544246 GVQW1Q8N7I0 195 aa9.16□□□□□ -0.94
PCDH9-204ENST00000544246 OR1L8Q8NGR8 309 aa9.16□□□□□ -0.94
PCDH9-204ENST00000544246 PTP4A1Q93096 173 aa9.16□□□□□ -0.94
PCDH9-204ENST00000544246 CNRIP1Q96F85 164 aaPredicted RBP9.16□□□□□ -0.94
PCDH9-204ENST00000544246 LINC00615Q96LM1 132 aaPredicted RBP9.16□□□□□ -0.94
PCDH9-204ENST00000544246 VDAC1P21796 283 aa9.15□□□□□ -0.94
PCDH9-204ENST00000544246 CKS2P33552 79 aa9.15□□□□□ -0.94
PCDH9-204ENST00000544246 ID4P47928 161 aa9.15□□□□□ -0.94
PCDH9-204ENST00000544246 ACVR1Q04771 509 aa9.15□□□□□ -0.94
PCDH9-204ENST00000544246 LSM10Q969L4 123 aaKnown RBP9.15□□□□□ -0.94
PCDH9-204ENST00000544246 ALG14Q96F25 216 aa9.15□□□□□ -0.94
PCDH9-204ENST00000544246 TREM2Q9NZC2 230 aa9.15□□□□□ -0.94
PCDH9-204ENST00000544246 SIGLEC7Q9Y286 467 aa9.15□□□□□ -0.94
PCDH9-204ENST00000544246 A0A1W2PPC1 479 aa9.15□□□□□ -0.94
PCDH9-204ENST00000544246 NAAAQ02083 359 aa9.15□□□□□ -0.94
PCDH9-204ENST00000544246 UBE2V2Q15819 145 aa9.15□□□□□ -0.94
PCDH9-204ENST00000544246 PLPPR5Q32ZL2 321 aa9.15□□□□□ -0.94
PCDH9-204ENST00000544246 DDB2Q92466 427 aa9.15□□□□□ -0.94
PCDH9-204ENST00000544246 SAP30LQ9HAJ7 183 aa9.15□□□□□ -0.94
PCDH9-204ENST00000544246 PRR13Q9NZ81 148 aa9.15□□□□□ -0.94
PCDH9-204ENST00000544246 WNK3Q9BYP7 1800 aa9.15□□□□□ -0.94
PCDH9-204ENST00000544246 MYO10Q9HD67 2058 aa9.15□□□□□ -0.94
PCDH9-204ENST00000544246 IGHV3OR16-12A0A075B7B8 117 aa9.15□□□□□ -0.94
PCDH9-204ENST00000544246 PRRT4C9JH25 899 aa9.15□□□□□ -0.94
PCDH9-204ENST00000544246 ETHE1O95571 254 aa9.15□□□□□ -0.94
PCDH9-204ENST00000544246 PRSS2P07478 247 aa9.15□□□□□ -0.94
PCDH9-204ENST00000544246 GLULP15104 373 aa9.15□□□□□ -0.94
PCDH9-204ENST00000544246 SSPNQ14714 243 aa9.15□□□□□ -0.94
PCDH9-204ENST00000544246 CCDC144NLQ6NUI1 221 aa9.15□□□□□ -0.94
PCDH9-204ENST00000544246 FGF14Q92915 247 aa9.15□□□□□ -0.94
PCDH9-204ENST00000544246 GNRHR2Q96P88 292 aa9.15□□□□□ -0.94
PCDH9-204ENST00000544246 SPAG8Q99932 426 aaPredicted RBP9.15□□□□□ -0.94
PCDH9-204ENST00000544246 SOSTQ9BQB4 213 aa9.15□□□□□ -0.94
PCDH9-204ENST00000544246 RHNO1Q9BSD3 238 aa9.15□□□□□ -0.94
PCDH9-204ENST00000544246 TRAF4Q9BUZ4 470 aaPredicted RBP9.15□□□□□ -0.94
PCDH9-204ENST00000544246 MAP1LC3AQ9H492 121 aa9.15□□□□□ -0.94
PCDH9-204ENST00000544246 WNT16Q9UBV4 365 aa9.15□□□□□ -0.94
PCDH9-204ENST00000544246 A0A0B4J293 547 aa9.15□□□□□ -0.95
PCDH9-204ENST00000544246 ADAP1O75689 374 aa9.15□□□□□ -0.95
PCDH9-204ENST00000544246 CRYBB2P43320 205 aa9.15□□□□□ -0.95
PCDH9-204ENST00000544246 TFPI2P48307 235 aa9.15□□□□□ -0.95
PCDH9-204ENST00000544246 SELENOPP49908 381 aa9.15□□□□□ -0.95
PCDH9-204ENST00000544246 A0A1W2PS18 150 aa9.15□□□□□ -0.95
PCDH9-204ENST00000544246 LNP1A1A4G5 178 aa9.15□□□□□ -0.95
PCDH9-204ENST00000544246 GZMHP20718 246 aa9.15□□□□□ -0.95
PCDH9-204ENST00000544246 TSPO2Q5TGU0 170 aa9.15□□□□□ -0.95
PCDH9-204ENST00000544246 TMEM70Q9BUB7 260 aa9.15□□□□□ -0.95
PCDH9-204ENST00000544246 LRRC61Q9BV99 259 aa9.15□□□□□ -0.95
PCDH9-204ENST00000544246 GPR35Q9HC97 309 aa9.15□□□□□ -0.95
PCDH9-204ENST00000544246 IL20Q9NYY1 176 aa9.15□□□□□ -0.95
PCDH9-204ENST00000544246 IL19Q9UHD0 177 aa9.15□□□□□ -0.95
PCDH9-204ENST00000544246 MYH6P13533 1939 aa9.14□□□□□ -0.95
PCDH9-204ENST00000544246 IGHV3-21A0A0B4J1V1 117 aa9.14□□□□□ -0.95
PCDH9-204ENST00000544246 A0A1B0GU03 582 aa9.14□□□□□ -0.95
PCDH9-204ENST00000544246 HYPMO75409 117 aa9.14□□□□□ -0.95
PCDH9-204ENST00000544246 MYF5P13349 255 aa9.14□□□□□ -0.95
PCDH9-204ENST00000544246 GALNSP34059 522 aa9.14□□□□□ -0.95
PCDH9-204ENST00000544246 DLX6P56179 175 aa9.14□□□□□ -0.95
PCDH9-204ENST00000544246 PMCHL1Q16048 86 aa9.14□□□□□ -0.95
PCDH9-204ENST00000544246 ZBTB34Q8NCN2 500 aa9.14□□□□□ -0.95
PCDH9-204ENST00000544246 PARP11Q9NR21 331 aa9.14□□□□□ -0.95
PCDH9-204ENST00000544246 NEU3Q9UQ49 428 aa9.14□□□□□ -0.95
PCDH9-204ENST00000544246 PLPP3O14495 311 aa9.14□□□□□ -0.95
PCDH9-204ENST00000544246 WNT9BO14905 357 aa9.14□□□□□ -0.95
PCDH9-204ENST00000544246 IGHV4-34P06331 123 aa9.14□□□□□ -0.95
PCDH9-204ENST00000544246 IL11RAQ14626 422 aa9.14□□□□□ -0.95
PCDH9-204ENST00000544246 FOXB2Q5VYV0 432 aa9.14□□□□□ -0.95
PCDH9-204ENST00000544246 OR4B1Q8NGF8 309 aa9.14□□□□□ -0.95
PCDH9-204ENST00000544246 RAX2Q96IS3 184 aa9.14□□□□□ -0.95
PCDH9-204ENST00000544246 DNAJB12Q9NXW2 375 aaKnown RBP9.14□□□□□ -0.95
PCDH9-204ENST00000544246 SYNGR1O43759 233 aa9.14□□□□□ -0.95
PCDH9-204ENST00000544246 CEACAM5P06731 702 aa9.14□□□□□ -0.95
PCDH9-204ENST00000544246 LINC00596Q86U02 117 aa9.14□□□□□ -0.95
PCDH9-204ENST00000544246 OR4C13Q8NGP0 309 aa9.14□□□□□ -0.95
PCDH9-204ENST00000544246 HSPB9Q9BQS6 159 aa9.14□□□□□ -0.95
PCDH9-204ENST00000544246 RAB33BQ9H082 229 aa9.14□□□□□ -0.95
PCDH9-204ENST00000544246 ZFP64Q9NPA5 681 aa9.14□□□□□ -0.95
PCDH9-204ENST00000544246 SLC52A3Q9NQ40 469 aa9.14□□□□□ -0.95
PCDH9-204ENST00000544246 IGKV3D-11A0A0A0MRZ8 115 aa9.14□□□□□ -0.95
PCDH9-204ENST00000544246 A8MWL6 223 aa9.14□□□□□ -0.95
PCDH9-204ENST00000544246 LEUTXA8MZ59 168 aa9.14□□□□□ -0.95
PCDH9-204ENST00000544246 IGKV3-11P04433 115 aa9.14□□□□□ -0.95
PCDH9-204ENST00000544246 SLC35B1P78383 322 aa9.14□□□□□ -0.95
PCDH9-204ENST00000544246 OR8B12Q8NGG6 310 aa9.14□□□□□ -0.95
PCDH9-204ENST00000544246 NUBPLQ8TB37 319 aa9.14□□□□□ -0.95
PCDH9-204ENST00000544246 CRYGNQ8WXF5 182 aa9.14□□□□□ -0.95
PCDH9-204ENST00000544246 ASB10Q8WXI3 467 aa9.14□□□□□ -0.95
PCDH9-204ENST00000544246 GUCD1Q96NT3 240 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms