RNA–Protein interactions for RNA: ENST00000544052.6

SCFD1-207, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-207ENST00000544052 ZFP2Q6ZN57 461 aa2.35□□□□□ -2.03
SCFD1-207ENST00000544052 TRMT10CQ7L0Y3 403 aaKnown RBP2.35□□□□□ -2.03
SCFD1-207ENST00000544052 TRAPPC5Q8IUR0 188 aa2.35□□□□□ -2.03
SCFD1-207ENST00000544052 NKAIN4Q8IVV8 208 aa2.35□□□□□ -2.03
SCFD1-207ENST00000544052 CYB561D1Q8N8Q1 229 aa2.35□□□□□ -2.03
SCFD1-207ENST00000544052 COX18Q8N8Q8 333 aa2.35□□□□□ -2.03
SCFD1-207ENST00000544052 FDCSPQ8NFU4 85 aa2.35□□□□□ -2.03
SCFD1-207ENST00000544052 OR4K2Q8NGD2 314 aa2.35□□□□□ -2.03
SCFD1-207ENST00000544052 OR8K1Q8NGG5 319 aa2.35□□□□□ -2.03
SCFD1-207ENST00000544052 ACTL9Q8TC94 416 aa2.35□□□□□ -2.03
SCFD1-207ENST00000544052 NEURL3Q96EH8 262 aa2.35□□□□□ -2.03
SCFD1-207ENST00000544052 ZNF514Q96K75 400 aaPredicted RBP2.35□□□□□ -2.03
SCFD1-207ENST00000544052 ZNF285Q96NJ3 590 aa2.35□□□□□ -2.03
SCFD1-207ENST00000544052 SCGB3A2Q96PL1 93 aa2.35□□□□□ -2.03
SCFD1-207ENST00000544052 PARP12Q9H0J9 701 aaKnown RBP2.35□□□□□ -2.03
SCFD1-207ENST00000544052 C1orf198Q9H425 327 aa2.35□□□□□ -2.03
SCFD1-207ENST00000544052 KIR3DX1Q9H7L2 352 aa2.35□□□□□ -2.03
SCFD1-207ENST00000544052 IMP3Q9NV31 184 aaKnown RBP2.35□□□□□ -2.03
SCFD1-207ENST00000544052 TSSC4Q9Y5U2 329 aaPredicted RBP2.35□□□□□ -2.03
SCFD1-207ENST00000544052 EXPH5Q8NEV8 1989 aa2.35□□□□□ -2.03
SCFD1-207ENST00000544052 PKDREJQ9NTG1 2253 aa2.35□□□□□ -2.03
SCFD1-207ENST00000544052 NOTCH2Q04721 2471 aa2.35□□□□□ -2.03
SCFD1-207ENST00000544052 APCP25054 2843 aa2.35□□□□□ -2.03
SCFD1-207ENST00000544052 MYO9AB2RTY4 2548 aa2.35□□□□□ -2.03
SCFD1-207ENST00000544052 MED13LQ71F56 2210 aa2.35□□□□□ -2.03
SCFD1-207ENST00000544052 NUP214P35658 2090 aaPredicted RBP2.35□□□□□ -2.03
SCFD1-207ENST00000544052 A6NDN8 102 aa2.35□□□□□ -2.03
SCFD1-207ENST00000544052 MGAT4DA6NG13 374 aa2.35□□□□□ -2.03
SCFD1-207ENST00000544052 TLCD2A6NGC4 264 aa2.35□□□□□ -2.03
SCFD1-207ENST00000544052 GOLGA8RI6L899 631 aa2.35□□□□□ -2.03
SCFD1-207ENST00000544052 K7EN84 100 aa2.35□□□□□ -2.03
SCFD1-207ENST00000544052 ADAP1O75689 374 aa2.35□□□□□ -2.03
SCFD1-207ENST00000544052 ETHE1O95571 254 aa2.35□□□□□ -2.03
SCFD1-207ENST00000544052 KLK1P06870 262 aa2.35□□□□□ -2.03
SCFD1-207ENST00000544052 TACSTD2P09758 323 aa2.35□□□□□ -2.03
SCFD1-207ENST00000544052 PGAM1P18669 254 aa2.35□□□□□ -2.03
SCFD1-207ENST00000544052 RBM34P42696 430 aaKnown RBP2.35□□□□□ -2.03
SCFD1-207ENST00000544052 TFDP2Q14188 446 aa2.35□□□□□ -2.03
SCFD1-207ENST00000544052 RBMY1FQ15415 496 aaKnown RBP2.35□□□□□ -2.03
SCFD1-207ENST00000544052 CHRFAM7AQ494W8 412 aa2.35□□□□□ -2.03
SCFD1-207ENST00000544052 CCSMST1Q4G0I0 132 aa2.35□□□□□ -2.03
SCFD1-207ENST00000544052 TFDP3Q5H9I0 405 aa2.35□□□□□ -2.03
SCFD1-207ENST00000544052 Q6P435 159 aa2.35□□□□□ -2.03
SCFD1-207ENST00000544052 Q6ZR03 302 aa2.35□□□□□ -2.03
SCFD1-207ENST00000544052 GLT6D1Q7Z4J2 308 aa2.35□□□□□ -2.03
SCFD1-207ENST00000544052 LINC01551Q86U37 167 aa2.35□□□□□ -2.03
SCFD1-207ENST00000544052 BOD1L2Q8IYS8 172 aa2.35□□□□□ -2.03
SCFD1-207ENST00000544052 SLC7A5P1Q8MH63 180 aa2.35□□□□□ -2.03
SCFD1-207ENST00000544052 PGAM4Q8N0Y7 254 aa2.35□□□□□ -2.03
SCFD1-207ENST00000544052 CCDC112Q8NEF3 446 aa2.35□□□□□ -2.03
SCFD1-207ENST00000544052 OR7G1Q8NGA0 311 aa2.35□□□□□ -2.03
SCFD1-207ENST00000544052 OR10W1Q8NGF6 305 aa2.35□□□□□ -2.03
SCFD1-207ENST00000544052 C17orf50Q8WW18 174 aa2.35□□□□□ -2.03
SCFD1-207ENST00000544052 RBMXL1Q96E39 390 aaKnown RBP2.35□□□□□ -2.03
SCFD1-207ENST00000544052 PARD6GQ9BYG4 376 aaPredicted RBP2.35□□□□□ -2.03
SCFD1-207ENST00000544052 ANKHQ9HCJ1 492 aa2.35□□□□□ -2.03
SCFD1-207ENST00000544052 MYOZ1Q9NP98 299 aaPredicted RBP2.35□□□□□ -2.03
SCFD1-207ENST00000544052 SDHAF3Q9NRP4 125 aa2.35□□□□□ -2.03
SCFD1-207ENST00000544052 DNAJC13O75165 2243 aa2.34□□□□□ -2.03
SCFD1-207ENST00000544052 ZNF407Q9C0G0 2248 aa2.34□□□□□ -2.03
SCFD1-207ENST00000544052 IGLV4-69A0A075B6H9 119 aa2.34□□□□□ -2.03
SCFD1-207ENST00000544052 SLC5A10A0PJK1 596 aa2.34□□□□□ -2.03
SCFD1-207ENST00000544052 C21orf140B9A014 251 aa2.34□□□□□ -2.03
SCFD1-207ENST00000544052 H3BN98 237 aa2.34□□□□□ -2.03
SCFD1-207ENST00000544052 APOC4-APOC2K7ER74 178 aa2.34□□□□□ -2.03
SCFD1-207ENST00000544052 OR1I1O60431 355 aa2.34□□□□□ -2.03
SCFD1-207ENST00000544052 CDC40O60508 579 aaKnown RBP eCLIP2.34□□□□□ -2.03
SCFD1-207ENST00000544052 SPAG7O75391 227 aa2.34□□□□□ -2.03
SCFD1-207ENST00000544052 APOC2P02655 101 aa2.34□□□□□ -2.03
SCFD1-207ENST00000544052 UGT2B7P16662 529 aa2.34□□□□□ -2.03
SCFD1-207ENST00000544052 CD40LGP29965 261 aa2.34□□□□□ -2.03
SCFD1-207ENST00000544052 CRATP43155 626 aa2.34□□□□□ -2.03
SCFD1-207ENST00000544052 UBE2KP61086 200 aa2.34□□□□□ -2.03
SCFD1-207ENST00000544052 PAFAH1B2P68402 229 aa2.34□□□□□ -2.03
SCFD1-207ENST00000544052 SLAMF1Q13291 335 aa2.34□□□□□ -2.03
SCFD1-207ENST00000544052 TAF1AQ15573 450 aaPredicted RBP2.34□□□□□ -2.03
SCFD1-207ENST00000544052 NDUFAF6Q330K2 333 aa2.34□□□□□ -2.03
SCFD1-207ENST00000544052 PRMT9Q6P2P2 845 aa2.34□□□□□ -2.03
SCFD1-207ENST00000544052 TIFABQ6ZNK6 161 aa2.34□□□□□ -2.03
SCFD1-207ENST00000544052 SNX20Q7Z614 316 aa2.34□□□□□ -2.03
SCFD1-207ENST00000544052 GATSQ8NAP1 163 aa2.34□□□□□ -2.03
SCFD1-207ENST00000544052 OR4E2Q8NGC2 313 aa2.34□□□□□ -2.03
SCFD1-207ENST00000544052 CIDECQ96AQ7 238 aaPredicted RBP2.34□□□□□ -2.03
SCFD1-207ENST00000544052 EXOSC8Q96B26 276 aaKnown RBP2.34□□□□□ -2.03
SCFD1-207ENST00000544052 NAPGQ99747 312 aaPredicted RBP2.34□□□□□ -2.03
SCFD1-207ENST00000544052 AGMATQ9BSE5 352 aa2.34□□□□□ -2.03
SCFD1-207ENST00000544052 ING2Q9H160 280 aa2.34□□□□□ -2.03
SCFD1-207ENST00000544052 TRABDQ9H4I3 376 aa2.34□□□□□ -2.03
SCFD1-207ENST00000544052 TMEM27Q9HBJ8 222 aa2.34□□□□□ -2.03
SCFD1-207ENST00000544052 MED4Q9NPJ6 270 aa2.34□□□□□ -2.03
SCFD1-207ENST00000544052 ASF1BQ9NVP2 202 aa2.34□□□□□ -2.03
SCFD1-207ENST00000544052 DHCR7Q9UBM7 475 aaKnown RBP2.34□□□□□ -2.03
SCFD1-207ENST00000544052 NXT1Q9UKK6 140 aaKnown RBP2.34□□□□□ -2.03
SCFD1-207ENST00000544052 FARSAQ9Y285 508 aaKnown RBP2.34□□□□□ -2.03
SCFD1-207ENST00000544052 DCHS2Q6V1P9 2916 aa2.34□□□□□ -2.03
SCFD1-207ENST00000544052 KIAA1549Q9HCM3 1950 aa2.34□□□□□ -2.03
SCFD1-207ENST00000544052 OTOGQ6ZRI0 2925 aa2.34□□□□□ -2.04
SCFD1-207ENST00000544052 POLQO75417 2590 aa2.34□□□□□ -2.04
SCFD1-207ENST00000544052 CELSR1Q9NYQ6 3014 aa2.34□□□□□ -2.04
SCFD1-207ENST00000544052 CREBBPQ92793 2442 aa2.34□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms