RNA–Protein interactions for RNA: ENST00000543928.5

SP140-213, Transcript of SP140 nuclear body protein, humanhuman

TSL 2

Gene SP140, Length 640 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-213ENST00000543928 KBTBD11-OT1A0A1B0GTJ5 212 aa11.15□□□□□ -0.62
SP140-213ENST00000543928 SMIM31A0A1B0GVY4 71 aa11.15□□□□□ -0.62
SP140-213ENST00000543928 DPPA5A6NC42 116 aa11.15□□□□□ -0.62
SP140-213ENST00000543928 RNASEK-C17orf49H0YIS7 233 aa11.15□□□□□ -0.62
SP140-213ENST00000543928 ZNF701M0R085 212 aaPredicted RBP11.15□□□□□ -0.62
SP140-213ENST00000543928 MFNGO00587 321 aa11.15□□□□□ -0.62
SP140-213ENST00000543928 MMP23AO75900 390 aa11.15□□□□□ -0.62
SP140-213ENST00000543928 NAPSAO96009 420 aa11.15□□□□□ -0.62
SP140-213ENST00000543928 IGHV1-8P0DP01 117 aa11.15□□□□□ -0.62
SP140-213ENST00000543928 HOXB4P17483 251 aaPredicted RBP11.15□□□□□ -0.62
SP140-213ENST00000543928 SRD5A1P18405 259 aa11.15□□□□□ -0.62
SP140-213ENST00000543928 OMGP23515 440 aa11.15□□□□□ -0.62
SP140-213ENST00000543928 SSTR5P35346 364 aa11.15□□□□□ -0.62
SP140-213ENST00000543928 KLRD1Q13241 179 aa11.15□□□□□ -0.62
SP140-213ENST00000543928 PRAMEF5Q5TYX0 476 aa11.15□□□□□ -0.62
SP140-213ENST00000543928 GPR157Q5UAW9 335 aa11.15□□□□□ -0.62
SP140-213ENST00000543928 NCR3LG1Q68D85 454 aa11.15□□□□□ -0.62
SP140-213ENST00000543928 MZT2AQ6P582 158 aa11.15□□□□□ -0.62
SP140-213ENST00000543928 TNFRSF14Q92956 283 aa11.15□□□□□ -0.62
SP140-213ENST00000543928 CMSS1Q9BQ75 279 aaKnown RBP11.15□□□□□ -0.62
SP140-213ENST00000543928 HDHD3Q9BSH5 251 aaPredicted RBP11.15□□□□□ -0.62
SP140-213ENST00000543928 ABCG5Q9H222 651 aa11.15□□□□□ -0.62
SP140-213ENST00000543928 CHMP1AQ9HD42 196 aaPredicted RBP11.15□□□□□ -0.62
SP140-213ENST00000543928 CCDC59Q9P031 241 aaKnown RBP11.15□□□□□ -0.62
SP140-213ENST00000543928 SESN1Q9Y6P5 492 aa11.15□□□□□ -0.62
SP140-213ENST00000543928 A0A0A6YYH2 397 aa11.14□□□□□ -0.63
SP140-213ENST00000543928 A6NJ64 397 aa11.14□□□□□ -0.63
SP140-213ENST00000543928 SERPINE3A8MV23 424 aa11.14□□□□□ -0.63
SP140-213ENST00000543928 ORC5O43913 435 aa11.14□□□□□ -0.63
SP140-213ENST00000543928 CD3GP09693 182 aa11.14□□□□□ -0.63
SP140-213ENST00000543928 RCC1P18754 421 aaPredicted RBP11.14□□□□□ -0.63
SP140-213ENST00000543928 GZMHP20718 246 aa11.14□□□□□ -0.63
SP140-213ENST00000543928 COX7A1P24310 79 aa11.14□□□□□ -0.63
SP140-213ENST00000543928 CDK2P24941 298 aa11.14□□□□□ -0.63
SP140-213ENST00000543928 GDNFP39905 211 aa11.14□□□□□ -0.63
SP140-213ENST00000543928 MRPS15P82914 257 aaKnown RBP11.14□□□□□ -0.63
SP140-213ENST00000543928 ARFRP1Q13795 201 aa11.14□□□□□ -0.63
SP140-213ENST00000543928 ARL6IP1Q15041 203 aa11.14□□□□□ -0.63
SP140-213ENST00000543928 CDNFQ49AH0 187 aa11.14□□□□□ -0.63
SP140-213ENST00000543928 C6orf183Q5T699 404 aa11.14□□□□□ -0.63
SP140-213ENST00000543928 HCP5Q6MZN7 132 aa11.14□□□□□ -0.63
SP140-213ENST00000543928 HEPN1Q6WQI6 88 aa11.14□□□□□ -0.63
SP140-213ENST00000543928 RFESDQ8TAC1 157 aa11.14□□□□□ -0.63
SP140-213ENST00000543928 UBALD1Q8TB05 177 aa11.14□□□□□ -0.63
SP140-213ENST00000543928 SETD6Q8TBK2 473 aa11.14□□□□□ -0.63
SP140-213ENST00000543928 ARL11Q969Q4 196 aa11.14□□□□□ -0.63
SP140-213ENST00000543928 S100A16Q96FQ6 103 aaKnown RBP11.14□□□□□ -0.63
SP140-213ENST00000543928 CMTM3Q96MX0 182 aa11.14□□□□□ -0.63
SP140-213ENST00000543928 RIMS4Q9H426 269 aaPredicted RBP11.14□□□□□ -0.63
SP140-213ENST00000543928 HEXA-AS1Q9H8Q6 139 aa11.14□□□□□ -0.63
SP140-213ENST00000543928 C12orf4Q9NQ89 552 aa11.14□□□□□ -0.63
SP140-213ENST00000543928 DIABLOQ9NR28 239 aa11.14□□□□□ -0.63
SP140-213ENST00000543928 NDUFA13Q9P0J0 144 aa11.14□□□□□ -0.63
SP140-213ENST00000543928 NUP50Q9UKX7 468 aa11.14□□□□□ -0.63
SP140-213ENST00000543928 TRAV18A0A075B6X5 111 aa11.13□□□□□ -0.63
SP140-213ENST00000543928 TRBV6-6A0A0A6YYG2 114 aa11.13□□□□□ -0.63
SP140-213ENST00000543928 IGHV1-69DA0A0B4J2H0 117 aa11.13□□□□□ -0.63
SP140-213ENST00000543928 A0A1W2PRD5 423 aa11.13□□□□□ -0.63
SP140-213ENST00000543928 A0A1W2PRF3 423 aa11.13□□□□□ -0.63
SP140-213ENST00000543928 A0A1W2PRM7 423 aa11.13□□□□□ -0.63
SP140-213ENST00000543928 C12orf77C9JDV5 145 aa11.13□□□□□ -0.63
SP140-213ENST00000543928 NPIPB11E5RHQ5 1161 aa11.13□□□□□ -0.63
SP140-213ENST00000543928 C15orf65H3BRN8 121 aa11.13□□□□□ -0.63
SP140-213ENST00000543928 HPGDSO60760 199 aa11.13□□□□□ -0.63
SP140-213ENST00000543928 IGHV1-69P01742 117 aa11.13□□□□□ -0.63
SP140-213ENST00000543928 APOA1P02647 267 aa11.13□□□□□ -0.63
SP140-213ENST00000543928 EIF4EP06730 217 aaKnown RBP11.13□□□□□ -0.63
SP140-213ENST00000543928 GSTP1P09211 210 aaKnown RBP11.13□□□□□ -0.63
SP140-213ENST00000543928 EPHA1P21709 976 aa11.13□□□□□ -0.63
SP140-213ENST00000543928 GUCA2AQ02747 115 aa11.13□□□□□ -0.63
SP140-213ENST00000543928 RUSC1-AS1Q66K80 236 aa11.13□□□□□ -0.63
SP140-213ENST00000543928 TRAT1Q6PIZ9 186 aa11.13□□□□□ -0.63
SP140-213ENST00000543928 BAIAP2L2Q6UXY1 529 aa11.13□□□□□ -0.63
SP140-213ENST00000543928 BRD3OSQ6XYD6 125 aa11.13□□□□□ -0.63
SP140-213ENST00000543928 Q6ZPA2 131 aa11.13□□□□□ -0.63
SP140-213ENST00000543928 IZUMO1Q8IYV9 350 aa11.13□□□□□ -0.63
SP140-213ENST00000543928 PNKDQ8N490 385 aa11.13□□□□□ -0.63
SP140-213ENST00000543928 DTX3Q8N9I9 347 aa11.13□□□□□ -0.63
SP140-213ENST00000543928 OR13D1Q8NGV5 346 aa11.13□□□□□ -0.63
SP140-213ENST00000543928 KIRREL1Q96J84 757 aa11.13□□□□□ -0.63
SP140-213ENST00000543928 SUCNR1Q9BXA5 334 aa11.13□□□□□ -0.63
SP140-213ENST00000543928 LINC00574Q9H8X3 128 aa11.13□□□□□ -0.63
SP140-213ENST00000543928 TAF9BQ9HBM6 251 aa11.13□□□□□ -0.63
SP140-213ENST00000543928 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.13□□□□□ -0.63
SP140-213ENST00000543928 MBNL3Q9NUK0 354 aaKnown RBP11.13□□□□□ -0.63
SP140-213ENST00000543928 IDI2-AS1Q9NZ38 188 aa11.13□□□□□ -0.63
SP140-213ENST00000543928 KCNIP1Q9NZI2 227 aa11.13□□□□□ -0.63
SP140-213ENST00000543928 ZNF69Q9UC07 566 aa11.13□□□□□ -0.63
SP140-213ENST00000543928 ELF5Q9UKW6 265 aaPredicted RBP11.13□□□□□ -0.63
SP140-213ENST00000543928 FAM172BPA6NC97 362 aa11.12□□□□□ -0.63
SP140-213ENST00000543928 TMEM235A6NFC5 223 aa11.12□□□□□ -0.63
SP140-213ENST00000543928 SPINT2O43291 252 aa11.12□□□□□ -0.63
SP140-213ENST00000543928 XRCC3O43542 346 aa11.12□□□□□ -0.63
SP140-213ENST00000543928 FAM157CP0CG43 387 aa11.12□□□□□ -0.63
SP140-213ENST00000543928 ELK1P19419 428 aa11.12□□□□□ -0.63
SP140-213ENST00000543928 NFYBP25208 207 aa11.12□□□□□ -0.63
SP140-213ENST00000543928 UBE2E1P51965 193 aa11.12□□□□□ -0.63
SP140-213ENST00000543928 LTC4SQ16873 150 aa11.12□□□□□ -0.63
SP140-213ENST00000543928 ZNF260Q3ZCT1 412 aa11.12□□□□□ -0.63
SP140-213ENST00000543928 HACD4Q5VWC8 232 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms