RNA–Protein interactions for RNA: ENST00000543768.1

SCNN1A-221, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SCNN1A, Length 2,361 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-221ENST00000543768 SELENOHQ8IZQ5 122 aaKnown RBP13.68□□□□□ -0.22
SCNN1A-221ENST00000543768 C11orf1Q9H5F2 150 aa13.68□□□□□ -0.22
SCNN1A-221ENST00000543768 TMEM231Q9H6L2 316 aa13.68□□□□□ -0.22
SCNN1A-221ENST00000543768 GLRX2Q9NS18 164 aa13.68□□□□□ -0.22
SCNN1A-221ENST00000543768 LYZL6O75951 148 aa13.68□□□□□ -0.22
SCNN1A-221ENST00000543768 F12P00748 615 aaPredicted RBP13.68□□□□□ -0.22
SCNN1A-221ENST00000543768 IDH3GP51553 393 aaPredicted RBP13.68□□□□□ -0.22
SCNN1A-221ENST00000543768 PPP1CBP62140 327 aa13.68□□□□□ -0.22
SCNN1A-221ENST00000543768 BTNL8Q6UX41 500 aa13.68□□□□□ -0.22
SCNN1A-221ENST00000543768 SEC11CQ9BY50 192 aa13.68□□□□□ -0.22
SCNN1A-221ENST00000543768 HSD17B6O14756 317 aa13.67□□□□□ -0.22
SCNN1A-221ENST00000543768 CAV2P51636 162 aa13.67□□□□□ -0.22
SCNN1A-221ENST00000543768 RAB5BP61020 215 aa13.67□□□□□ -0.22
SCNN1A-221ENST00000543768 UBE2NP61088 152 aaKnown RBP13.67□□□□□ -0.22
SCNN1A-221ENST00000543768 SNRPEP62304 92 aaKnown RBP13.67□□□□□ -0.22
SCNN1A-221ENST00000543768 NHLH2Q02577 135 aa13.67□□□□□ -0.22
SCNN1A-221ENST00000543768 TGFBR3Q03167 851 aa13.67□□□□□ -0.22
SCNN1A-221ENST00000543768 GUSBP1Q15486 140 aa13.67□□□□□ -0.22
SCNN1A-221ENST00000543768 IGFL2Q6UWQ7 119 aa13.67□□□□□ -0.22
SCNN1A-221ENST00000543768 FAM214BQ7L5A3 538 aa13.67□□□□□ -0.22
SCNN1A-221ENST00000543768 ZNF695Q8IW36 515 aa13.67□□□□□ -0.22
SCNN1A-221ENST00000543768 RHOFQ9HBH0 211 aa13.67□□□□□ -0.22
SCNN1A-221ENST00000543768 FOLR2P14207 255 aa13.67□□□□□ -0.22
SCNN1A-221ENST00000543768 UCP1P25874 307 aa13.67□□□□□ -0.22
SCNN1A-221ENST00000543768 GABRA6Q16445 453 aa13.67□□□□□ -0.22
SCNN1A-221ENST00000543768 ALKBH6Q3KRA9 238 aa13.67□□□□□ -0.22
SCNN1A-221ENST00000543768 ZNF324BQ6AW86 544 aaPredicted RBP13.67□□□□□ -0.22
SCNN1A-221ENST00000543768 SCCPDHQ8NBX0 429 aa13.67□□□□□ -0.22
SCNN1A-221ENST00000543768 TRIB1Q96RU8 372 aa13.67□□□□□ -0.22
SCNN1A-221ENST00000543768 RTL8AQ9BWD3 113 aa13.67□□□□□ -0.22
SCNN1A-221ENST00000543768 PARP11Q9NR21 331 aa13.67□□□□□ -0.22
SCNN1A-221ENST00000543768 UQCC1Q9NVA1 299 aa13.67□□□□□ -0.22
SCNN1A-221ENST00000543768 OTOGLQ3ZCN5 2332 aa13.67□□□□□ -0.22
SCNN1A-221ENST00000543768 ZFHX4Q86UP3 3567 aa13.66□□□□□ -0.22
SCNN1A-221ENST00000543768 LRP5LA4QPB2 252 aa13.66□□□□□ -0.22
SCNN1A-221ENST00000543768 DEGS1O15121 323 aa13.66□□□□□ -0.22
SCNN1A-221ENST00000543768 ZNF44P15621 663 aa13.66□□□□□ -0.22
SCNN1A-221ENST00000543768 MUC1P15941 1255 aaPredicted RBP13.66□□□□□ -0.22
SCNN1A-221ENST00000543768 ID4P47928 161 aa13.66□□□□□ -0.22
SCNN1A-221ENST00000543768 ERVK11-1P61568 191 aa13.66□□□□□ -0.22
SCNN1A-221ENST00000543768 HLA-DRB3P79483 266 aa13.66□□□□□ -0.22
SCNN1A-221ENST00000543768 MRPL49Q13405 166 aaKnown RBP13.66□□□□□ -0.22
SCNN1A-221ENST00000543768 CDH20Q9HBT6 801 aa13.66□□□□□ -0.22
SCNN1A-221ENST00000543768 TREM1Q9NP99 234 aa13.66□□□□□ -0.22
SCNN1A-221ENST00000543768 FAM96BQ9Y3D0 163 aa13.66□□□□□ -0.22
SCNN1A-221ENST00000543768 HABP2Q14520 560 aaPredicted RBP13.66□□□□□ -0.22
SCNN1A-221ENST00000543768 Q6ZT83 130 aa13.66□□□□□ -0.22
SCNN1A-221ENST00000543768 LYPD6BQ8NI32 183 aa13.66□□□□□ -0.22
SCNN1A-221ENST00000543768 SLC25A40Q8TBP6 338 aa13.66□□□□□ -0.22
SCNN1A-221ENST00000543768 GINS3Q9BRX5 216 aa13.66□□□□□ -0.22
SCNN1A-221ENST00000543768 CABLES2Q9BTV7 478 aa13.66□□□□□ -0.22
SCNN1A-221ENST00000543768 ASPMQ8IZT6 3477 aa13.65□□□□□ -0.22
SCNN1A-221ENST00000543768 PGLYRP1O75594 196 aaPredicted RBP13.65□□□□□ -0.22
SCNN1A-221ENST00000543768 GNMTQ14749 295 aa13.65□□□□□ -0.22
SCNN1A-221ENST00000543768 NMSQ5H8A3 153 aa13.65□□□□□ -0.22
SCNN1A-221ENST00000543768 RBMS3Q6XE24 437 aaKnown RBP13.65□□□□□ -0.22
SCNN1A-221ENST00000543768 Q6ZRG5 221 aa13.65□□□□□ -0.22
SCNN1A-221ENST00000543768 H1FOOQ8IZA3 346 aaPredicted RBP13.65□□□□□ -0.22
SCNN1A-221ENST00000543768 BOD1Q96IK1 185 aa13.65□□□□□ -0.22
SCNN1A-221ENST00000543768 NIT2Q9NQR4 276 aa13.65□□□□□ -0.22
SCNN1A-221ENST00000543768 OR2W1Q9Y3N9 320 aa13.65□□□□□ -0.22
SCNN1A-221ENST00000543768 CLEC18AA5D8T8 446 aa13.65□□□□□ -0.22
SCNN1A-221ENST00000543768 ADAM20O43506 726 aa13.65□□□□□ -0.22
SCNN1A-221ENST00000543768 SEC11BP0C7V7 166 aa13.65□□□□□ -0.22
SCNN1A-221ENST00000543768 RAC2P15153 192 aa13.65□□□□□ -0.22
SCNN1A-221ENST00000543768 NFYBP25208 207 aa13.65□□□□□ -0.22
SCNN1A-221ENST00000543768 NKX2-1P43699 371 aaPredicted RBP13.65□□□□□ -0.22
SCNN1A-221ENST00000543768 UCP2P55851 309 aa13.65□□□□□ -0.22
SCNN1A-221ENST00000543768 PSG7Q13046 419 aa13.65□□□□□ -0.22
SCNN1A-221ENST00000543768 INO80CQ6PI98 192 aaPredicted RBP13.65□□□□□ -0.22
SCNN1A-221ENST00000543768 CMTM1Q8IZ96 169 aa13.65□□□□□ -0.22
SCNN1A-221ENST00000543768 CLEC18CQ8NCF0 446 aa13.65□□□□□ -0.22
SCNN1A-221ENST00000543768 OR10J5Q8NHC4 309 aa13.65□□□□□ -0.22
SCNN1A-221ENST00000543768 OR51M1Q9H341 326 aa13.65□□□□□ -0.22
SCNN1A-221ENST00000543768 TTC28Q96AY4 2481 aa13.64□□□□□ -0.23
SCNN1A-221ENST00000543768 BORCS7-ASMTA0A0B4J1R7 106 aa13.64□□□□□ -0.23
SCNN1A-221ENST00000543768 DUXBA0A1W2PPF3 345 aa13.64□□□□□ -0.23
SCNN1A-221ENST00000543768 C5orf52A6NGY3 159 aa13.64□□□□□ -0.23
SCNN1A-221ENST00000543768 COLCA2A8K830 154 aa13.64□□□□□ -0.23
SCNN1A-221ENST00000543768 UBE2CO00762 179 aa13.64□□□□□ -0.23
SCNN1A-221ENST00000543768 TNFSF12O43508 249 aa13.64□□□□□ -0.23
SCNN1A-221ENST00000543768 KIR2DL2P43627 348 aaPredicted RBP13.64□□□□□ -0.23
SCNN1A-221ENST00000543768 F2RL1P55085 397 aa13.64□□□□□ -0.23
SCNN1A-221ENST00000543768 ZNF154Q13106 437 aa13.64□□□□□ -0.23
SCNN1A-221ENST00000543768 PEA15Q15121 130 aa13.64□□□□□ -0.23
SCNN1A-221ENST00000543768 PLPPR1Q8TBJ4 325 aa13.64□□□□□ -0.23
SCNN1A-221ENST00000543768 KIRREL1Q96J84 757 aa13.64□□□□□ -0.23
SCNN1A-221ENST00000543768 SPIN2AQ99865 258 aa13.64□□□□□ -0.23
SCNN1A-221ENST00000543768 SPIN2BQ9BPZ2 258 aa13.64□□□□□ -0.23
SCNN1A-221ENST00000543768 NRIP2Q9BQI9 281 aa13.64□□□□□ -0.23
SCNN1A-221ENST00000543768 FAM212BQ9NTI7 297 aaPredicted RBP13.64□□□□□ -0.23
SCNN1A-221ENST00000543768 TREM2Q9NZC2 230 aa13.64□□□□□ -0.23
SCNN1A-221ENST00000543768 PRRC2CQ9Y520 2896 aaKnown RBP13.64□□□□□ -0.23
SCNN1A-221ENST00000543768 SPENQ96T58 3664 aaKnown RBP13.64□□□□□ -0.23
SCNN1A-221ENST00000543768 IQCF6A8MYZ5 107 aa13.64□□□□□ -0.23
SCNN1A-221ENST00000543768 H0Y980 276 aa13.64□□□□□ -0.23
SCNN1A-221ENST00000543768 SLC33A1O00400 549 aaPredicted RBP13.64□□□□□ -0.23
SCNN1A-221ENST00000543768 AQP7O14520 342 aa13.64□□□□□ -0.23
SCNN1A-221ENST00000543768 CDIPTO14735 213 aa13.64□□□□□ -0.23
SCNN1A-221ENST00000543768 OR2H2O95918 312 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms