RNA–Protein interactions for RNA: ENST00000543721.1

LMO3-229, Transcript of LIM domain only 3, humanhuman

TSL 2

Gene LMO3, Length 3,626 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-229ENST00000543721 SHISA5Q8N114 240 aa4.31□□□□□ -1.72
LMO3-229ENST00000543721 KLHDC1Q8N7A1 406 aa4.31□□□□□ -1.72
LMO3-229ENST00000543721 MRPL30Q8TCC3 161 aaKnown RBP4.31□□□□□ -1.72
LMO3-229ENST00000543721 GABRG3Q99928 467 aa4.31□□□□□ -1.72
LMO3-229ENST00000543721 RTN4RQ9BZR6 473 aa4.31□□□□□ -1.72
LMO3-229ENST00000543721 LIME1Q9H400 295 aa4.31□□□□□ -1.72
LMO3-229ENST00000543721 DNAJC4Q9NNZ3 241 aa4.31□□□□□ -1.72
LMO3-229ENST00000543721 PNRC2Q9NPJ4 139 aaKnown RBP4.31□□□□□ -1.72
LMO3-229ENST00000543721 LANCL2Q9NS86 450 aa4.31□□□□□ -1.72
LMO3-229ENST00000543721 WIPI2Q9Y4P8 454 aa4.31□□□□□ -1.72
LMO3-229ENST00000543721 PXMP4Q9Y6I8 212 aa4.31□□□□□ -1.72
LMO3-229ENST00000543721 IGKV3D-11A0A0A0MRZ8 115 aa4.31□□□□□ -1.72
LMO3-229ENST00000543721 A0A1W2PN81 502 aa4.31□□□□□ -1.72
LMO3-229ENST00000543721 FAM166BA8MTA8 275 aa4.31□□□□□ -1.72
LMO3-229ENST00000543721 DKK1O94907 266 aa4.31□□□□□ -1.72
LMO3-229ENST00000543721 FAHP16930 419 aa4.31□□□□□ -1.72
LMO3-229ENST00000543721 GZMHP20718 246 aa4.31□□□□□ -1.72
LMO3-229ENST00000543721 MDKP21741 143 aaPredicted RBP4.31□□□□□ -1.72
LMO3-229ENST00000543721 CHRNA7P36544 502 aa4.31□□□□□ -1.72
LMO3-229ENST00000543721 CDKN1BP46527 198 aa4.31□□□□□ -1.72
LMO3-229ENST00000543721 RRADP55042 308 aa4.31□□□□□ -1.72
LMO3-229ENST00000543721 FBXW4P57775 412 aa4.31□□□□□ -1.72
LMO3-229ENST00000543721 SELENOTP62341 195 aa4.31□□□□□ -1.72
LMO3-229ENST00000543721 HHEXQ03014 270 aa4.31□□□□□ -1.72
LMO3-229ENST00000543721 SLC25A53Q5H9E4 307 aa4.31□□□□□ -1.72
LMO3-229ENST00000543721 SFTPA1Q8IWL2 248 aa4.31□□□□□ -1.72
LMO3-229ENST00000543721 C11orf42Q8N5U0 333 aa4.31□□□□□ -1.72
LMO3-229ENST00000543721 NECAP1Q8NC96 275 aa4.31□□□□□ -1.72
LMO3-229ENST00000543721 OR1N1Q8NGS0 311 aa4.31□□□□□ -1.72
LMO3-229ENST00000543721 OR11L1Q8NGX0 322 aa4.31□□□□□ -1.72
LMO3-229ENST00000543721 SLC37A2Q8TED4 501 aa4.31□□□□□ -1.72
LMO3-229ENST00000543721 LSM10Q969L4 123 aaKnown RBP4.31□□□□□ -1.72
LMO3-229ENST00000543721 PIGTQ969N2 578 aa4.31□□□□□ -1.72
LMO3-229ENST00000543721 SLC35E1Q96K37 410 aa4.31□□□□□ -1.72
LMO3-229ENST00000543721 KLHDC3Q9BQ90 382 aa4.31□□□□□ -1.72
LMO3-229ENST00000543721 GSX1Q9H4S2 264 aaPredicted RBP4.31□□□□□ -1.72
LMO3-229ENST00000543721 ZNF319Q9P2F9 582 aa4.31□□□□□ -1.72
LMO3-229ENST00000543721 ALPK2Q86TB3 2170 aa4.31□□□□□ -1.72
LMO3-229ENST00000543721 A0A0U1RQK1 487 aa4.31□□□□□ -1.72
LMO3-229ENST00000543721 ZNF320A2RRD8 509 aa4.31□□□□□ -1.72
LMO3-229ENST00000543721 OTOL1A6NHN0 477 aaPredicted RBP4.31□□□□□ -1.72
LMO3-229ENST00000543721 RER1O15258 196 aa4.31□□□□□ -1.72
LMO3-229ENST00000543721 TCF21O43680 179 aa4.31□□□□□ -1.72
LMO3-229ENST00000543721 NRASP01111 189 aa4.31□□□□□ -1.72
LMO3-229ENST00000543721 KRASP01116 189 aa4.31□□□□□ -1.72
LMO3-229ENST00000543721 NTSR1P30989 418 aa4.31□□□□□ -1.72
LMO3-229ENST00000543721 CLDN15P56746 228 aa4.31□□□□□ -1.72
LMO3-229ENST00000543721 MFAP5Q13361 173 aa4.31□□□□□ -1.72
LMO3-229ENST00000543721 SMAD4Q13485 552 aaKnown RBP4.31□□□□□ -1.72
LMO3-229ENST00000543721 C9orf50Q5SZB4 431 aa4.31□□□□□ -1.72
LMO3-229ENST00000543721 KIAA0895LQ68EN5 471 aa4.31□□□□□ -1.72
LMO3-229ENST00000543721 SMIM15Q7Z3B0 74 aa4.31□□□□□ -1.72
LMO3-229ENST00000543721 POC1BQ8TC44 478 aa4.31□□□□□ -1.72
LMO3-229ENST00000543721 KCNE4Q8WWG9 221 aa4.31□□□□□ -1.72
LMO3-229ENST00000543721 RPUSD4Q96CM3 377 aaKnown RBP4.31□□□□□ -1.72
LMO3-229ENST00000543721 THOC3Q96J01 351 aaKnown RBP4.31□□□□□ -1.72
LMO3-229ENST00000543721 EMC6Q9BV81 110 aa4.31□□□□□ -1.72
LMO3-229ENST00000543721 PARLQ9H300 379 aa4.31□□□□□ -1.72
LMO3-229ENST00000543721 RIMS4Q9H426 269 aaPredicted RBP4.31□□□□□ -1.72
LMO3-229ENST00000543721 ZNF442Q9H7R0 627 aa4.31□□□□□ -1.72
LMO3-229ENST00000543721 UQCR10Q9UDW1 63 aa4.31□□□□□ -1.72
LMO3-229ENST00000543721 RNF115Q9Y4L5 304 aa4.31□□□□□ -1.72
LMO3-229ENST00000543721 LTBP2Q14767 1821 aa4.3□□□□□ -1.72
LMO3-229ENST00000543721 TRBV11-1A0A0K0K1C0 115 aa4.3□□□□□ -1.72
LMO3-229ENST00000543721 LRRC3CA6NJW4 275 aa4.3□□□□□ -1.72
LMO3-229ENST00000543721 FAM90A26D6RGX4 464 aa4.3□□□□□ -1.72
LMO3-229ENST00000543721 F6UZH7 168 aa4.3□□□□□ -1.72
LMO3-229ENST00000543721 K7EP13 123 aa4.3□□□□□ -1.72
LMO3-229ENST00000543721 PDE6DO43924 150 aa4.3□□□□□ -1.72
LMO3-229ENST00000543721 SERPINA7P05543 415 aa4.3□□□□□ -1.72
LMO3-229ENST00000543721 SERPINE2P07093 398 aa4.3□□□□□ -1.72
LMO3-229ENST00000543721 IL11P20809 199 aa4.3□□□□□ -1.72
LMO3-229ENST00000543721 DRD1P21728 446 aa4.3□□□□□ -1.72
LMO3-229ENST00000543721 CHRNB4P30926 498 aa4.3□□□□□ -1.72
LMO3-229ENST00000543721 MPLP40238 635 aa4.3□□□□□ -1.72
LMO3-229ENST00000543721 PTTG1IPP53801 180 aa4.3□□□□□ -1.72
LMO3-229ENST00000543721 PAX9P55771 341 aa4.3□□□□□ -1.72
LMO3-229ENST00000543721 SOX8P57073 446 aa4.3□□□□□ -1.72
LMO3-229ENST00000543721 YPEL3P61236 119 aaPredicted RBP4.3□□□□□ -1.72
LMO3-229ENST00000543721 RPL15P61313 204 aaKnown RBP4.3□□□□□ -1.72
LMO3-229ENST00000543721 HIST3H3Q16695 136 aa4.3□□□□□ -1.72
LMO3-229ENST00000543721 C4orf48Q5BLP8 95 aa4.3□□□□□ -1.72
LMO3-229ENST00000543721 CRIP3Q6Q6R5 217 aa4.3□□□□□ -1.72
LMO3-229ENST00000543721 ZNF525Q8N782 197 aa4.3□□□□□ -1.72
LMO3-229ENST00000543721 ZNF321PQ8N8H1 164 aa4.3□□□□□ -1.72
LMO3-229ENST00000543721 ZNF441Q8N8Z8 693 aa4.3□□□□□ -1.72
LMO3-229ENST00000543721 OR5AU1Q8NGC0 362 aa4.3□□□□□ -1.72
LMO3-229ENST00000543721 DIRC2Q96SL1 478 aa4.3□□□□□ -1.72
LMO3-229ENST00000543721 AURKAIP1Q9NWT8 199 aaPredicted RBP4.3□□□□□ -1.72
LMO3-229ENST00000543721 ZNF586Q9NXT0 402 aa4.3□□□□□ -1.72
LMO3-229ENST00000543721 RFNGQ9Y644 331 aa4.3□□□□□ -1.72
LMO3-229ENST00000543721 TRBV9A0A0B4J1U6 114 aa4.3□□□□□ -1.72
LMO3-229ENST00000543721 SHISA7A6NL88 538 aa4.3□□□□□ -1.72
LMO3-229ENST00000543721 CD300LBA8K4G0 201 aa4.3□□□□□ -1.72
LMO3-229ENST00000543721 M0R135 149 aa4.3□□□□□ -1.72
LMO3-229ENST00000543721 TMPRSS2O15393 492 aa4.3□□□□□ -1.72
LMO3-229ENST00000543721 SYNGR2O43760 224 aa4.3□□□□□ -1.72
LMO3-229ENST00000543721 GLI4P10075 376 aa4.3□□□□□ -1.72
LMO3-229ENST00000543721 TDGF1P13385 188 aa4.3□□□□□ -1.72
LMO3-229ENST00000543721 OTX1P32242 354 aaPredicted RBP4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms