RNA–Protein interactions for RNA: ENST00000542786.1

LDB3-207, Transcript of LIM domain binding 3, humanhuman

TSL 2 BASIC

Gene LDB3, Length 1,889 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-207ENST00000542786 SDHAF2Q9NX18 166 aa11.94□□□□□ -0.5
LDB3-207ENST00000542786 MGAQ8IWI9 3026 aa11.94□□□□□ -0.5
LDB3-207ENST00000542786 SPTBN2O15020 2390 aa11.94□□□□□ -0.5
LDB3-207ENST00000542786 UCP1P25874 307 aa11.93□□□□□ -0.5
LDB3-207ENST00000542786 GCH1P30793 250 aa11.93□□□□□ -0.5
LDB3-207ENST00000542786 SRPXP78539 464 aa11.93□□□□□ -0.5
LDB3-207ENST00000542786 C1QTNF12Q5T7M4 302 aa11.93□□□□□ -0.5
LDB3-207ENST00000542786 PDZD9Q8IXQ8 264 aa11.93□□□□□ -0.5
LDB3-207ENST00000542786 SELENOHQ8IZQ5 122 aaKnown RBP11.93□□□□□ -0.5
LDB3-207ENST00000542786 ZNF565Q8N9K5 539 aa11.93□□□□□ -0.5
LDB3-207ENST00000542786 BVESQ8NE79 360 aa11.93□□□□□ -0.5
LDB3-207ENST00000542786 OR4D5Q8NGN0 318 aa11.93□□□□□ -0.5
LDB3-207ENST00000542786 RBPMSQ93062 196 aaKnown RBP11.93□□□□□ -0.5
LDB3-207ENST00000542786 GPHA2Q96T91 129 aa11.93□□□□□ -0.5
LDB3-207ENST00000542786 ZNF835Q9Y2P0 537 aa11.93□□□□□ -0.5
LDB3-207ENST00000542786 K7EPK0 472 aa11.93□□□□□ -0.5
LDB3-207ENST00000542786 IGLV2-14P01704 120 aa11.93□□□□□ -0.5
LDB3-207ENST00000542786 CD200P41217 278 aa11.93□□□□□ -0.5
LDB3-207ENST00000542786 FAM71E2Q8N5Q1 922 aa11.93□□□□□ -0.5
LDB3-207ENST00000542786 OR52M1Q8NGK5 317 aa11.93□□□□□ -0.5
LDB3-207ENST00000542786 TAAR3PQ9P1P4 343 aa11.93□□□□□ -0.5
LDB3-207ENST00000542786 FBXO9Q9UK97 447 aaPredicted RBP11.93□□□□□ -0.5
LDB3-207ENST00000542786 ZDHHC8Q9ULC8 765 aa11.93□□□□□ -0.5
LDB3-207ENST00000542786 TMED3Q9Y3Q3 217 aa11.93□□□□□ -0.5
LDB3-207ENST00000542786 ZSCAN5BA6NJL1 495 aa11.92□□□□□ -0.5
LDB3-207ENST00000542786 M0R1B8 84 aa11.92□□□□□ -0.5
LDB3-207ENST00000542786 PGLYRP1O75594 196 aaPredicted RBP11.92□□□□□ -0.5
LDB3-207ENST00000542786 CDS2O95674 445 aa11.92□□□□□ -0.5
LDB3-207ENST00000542786 IGHV3-13P01766 116 aa11.92□□□□□ -0.5
LDB3-207ENST00000542786 FGF2P09038 288 aa11.92□□□□□ -0.5
LDB3-207ENST00000542786 SNTB1Q13884 538 aaKnown RBP11.92□□□□□ -0.5
LDB3-207ENST00000542786 TMEM268Q5VZI3 342 aa11.92□□□□□ -0.5
LDB3-207ENST00000542786 CISD2Q8N5K1 135 aaKnown RBP11.92□□□□□ -0.5
LDB3-207ENST00000542786 EIF4E3Q8N5X7 224 aaKnown RBP11.92□□□□□ -0.5
LDB3-207ENST00000542786 OR10J5Q8NHC4 309 aa11.92□□□□□ -0.5
LDB3-207ENST00000542786 TMEM171Q8WVE6 324 aa11.92□□□□□ -0.5
LDB3-207ENST00000542786 COQ2Q96H96 371 aa11.92□□□□□ -0.5
LDB3-207ENST00000542786 PARP12Q9H0J9 701 aaKnown RBP11.92□□□□□ -0.5
LDB3-207ENST00000542786 IGLV3-9A0A075B6K5 115 aa11.91□□□□□ -0.5
LDB3-207ENST00000542786 A0A0G2JNJ9 132 aa11.91□□□□□ -0.5
LDB3-207ENST00000542786 A8MXK9 166 aa11.91□□□□□ -0.5
LDB3-207ENST00000542786 H0Y980 276 aa11.91□□□□□ -0.5
LDB3-207ENST00000542786 HSD17B6O14756 317 aa11.91□□□□□ -0.5
LDB3-207ENST00000542786 SHOXO15266 292 aa11.91□□□□□ -0.5
LDB3-207ENST00000542786 FGF16O43320 207 aa11.91□□□□□ -0.5
LDB3-207ENST00000542786 HEXAP06865 529 aa11.91□□□□□ -0.5
LDB3-207ENST00000542786 GLRXP35754 106 aa11.91□□□□□ -0.5
LDB3-207ENST00000542786 OR3A1P47881 315 aa11.91□□□□□ -0.5
LDB3-207ENST00000542786 FAM27E3Q08E93 113 aa11.91□□□□□ -0.5
LDB3-207ENST00000542786 SPRNQ5BIV9 151 aa11.91□□□□□ -0.5
LDB3-207ENST00000542786 NMSQ5H8A3 153 aa11.91□□□□□ -0.5
LDB3-207ENST00000542786 SLC35E4Q6ICL7 350 aa11.91□□□□□ -0.5
LDB3-207ENST00000542786 FIP1L1Q6UN15 594 aaKnown RBP11.91□□□□□ -0.5
LDB3-207ENST00000542786 MEX3BQ6ZN04 569 aaKnown RBP11.91□□□□□ -0.5
LDB3-207ENST00000542786 BAP18Q8IXM2 172 aa11.91□□□□□ -0.5
LDB3-207ENST00000542786 Q9UFV3 132 aa11.91□□□□□ -0.5
LDB3-207ENST00000542786 MSRB2Q9Y3D2 182 aa11.91□□□□□ -0.5
LDB3-207ENST00000542786 TMEM30CPA0ZSE6 113 aa11.91□□□□□ -0.5
LDB3-207ENST00000542786 CLEC18AA5D8T8 446 aa11.91□□□□□ -0.5
LDB3-207ENST00000542786 NKX2-6A6NCS4 301 aa11.91□□□□□ -0.5
LDB3-207ENST00000542786 I3L521 148 aa11.91□□□□□ -0.5
LDB3-207ENST00000542786 TFF1P04155 84 aa11.91□□□□□ -0.5
LDB3-207ENST00000542786 TPT1P13693 172 aaKnown RBP11.91□□□□□ -0.5
LDB3-207ENST00000542786 RPL12P30050 165 aaKnown RBP11.91□□□□□ -0.5
LDB3-207ENST00000542786 CFHR2P36980 270 aa11.91□□□□□ -0.5
LDB3-207ENST00000542786 NUP62P37198 522 aaPredicted RBP11.91□□□□□ -0.5
LDB3-207ENST00000542786 PAX5Q02548 391 aa11.91□□□□□ -0.5
LDB3-207ENST00000542786 HSD17B13Q7Z5P4 300 aaPredicted RBP11.91□□□□□ -0.5
LDB3-207ENST00000542786 FOXRED2Q8IWF2 684 aa11.91□□□□□ -0.5
LDB3-207ENST00000542786 CLEC18CQ8NCF0 446 aa11.91□□□□□ -0.5
LDB3-207ENST00000542786 DMBX1Q8NFW5 382 aa11.91□□□□□ -0.5
LDB3-207ENST00000542786 OR5D13Q8NGL4 314 aa11.91□□□□□ -0.5
LDB3-207ENST00000542786 PIGMQ9H3S5 423 aa11.91□□□□□ -0.5
LDB3-207ENST00000542786 SEBOXQ9HB31 216 aaPredicted RBP11.91□□□□□ -0.5
LDB3-207ENST00000542786 TAF9BQ9HBM6 251 aa11.91□□□□□ -0.5
LDB3-207ENST00000542786 UFSP2Q9NUQ7 469 aa11.91□□□□□ -0.5
LDB3-207ENST00000542786 OR14J1Q9UGF5 321 aa11.91□□□□□ -0.5
LDB3-207ENST00000542786 METRNQ9UJH8 293 aa11.91□□□□□ -0.5
LDB3-207ENST00000542786 ERRFI1Q9UJM3 462 aaPredicted RBP11.91□□□□□ -0.5
LDB3-207ENST00000542786 RCL1Q9Y2P8 373 aaKnown RBP11.91□□□□□ -0.5
LDB3-207ENST00000542786 LSM5Q9Y4Y9 91 aaKnown RBP11.91□□□□□ -0.5
LDB3-207ENST00000542786 CEP295Q9C0D2 2601 aa11.9□□□□□ -0.5
LDB3-207ENST00000542786 DUXBA0A1W2PPF3 345 aa11.9□□□□□ -0.5
LDB3-207ENST00000542786 A6NLC8 198 aa11.9□□□□□ -0.5
LDB3-207ENST00000542786 IFNL4K9M1U5 179 aa11.9□□□□□ -0.5
LDB3-207ENST00000542786 EGR1P18146 543 aa11.9□□□□□ -0.5
LDB3-207ENST00000542786 OR10V1Q8NGI7 309 aa11.9□□□□□ -0.5
LDB3-207ENST00000542786 IL22RA2Q969J5 263 aa11.9□□□□□ -0.5
LDB3-207ENST00000542786 BSCL2Q96G97 398 aaPredicted RBP11.9□□□□□ -0.5
LDB3-207ENST00000542786 JKAMPQ9P055 326 aa11.9□□□□□ -0.5
LDB3-207ENST00000542786 TRAPPC2LQ9UL33 140 aa11.9□□□□□ -0.5
LDB3-207ENST00000542786 UBE2J1Q9Y385 318 aaPredicted RBP11.9□□□□□ -0.5
LDB3-207ENST00000542786 ACACAQ13085 2346 aa11.9□□□□□ -0.5
LDB3-207ENST00000542786 DSPP15924 2871 aaKnown RBP11.89□□□□□ -0.51
LDB3-207ENST00000542786 E5RGE8 158 aa11.89□□□□□ -0.51
LDB3-207ENST00000542786 ATP6V1G2-DDX39BF2Z307 99 aa11.89□□□□□ -0.51
LDB3-207ENST00000542786 FAM157CP0CG43 387 aa11.89□□□□□ -0.51
LDB3-207ENST00000542786 F2RP25116 425 aa11.89□□□□□ -0.51
LDB3-207ENST00000542786 SMIM21Q3B7S5 101 aa11.89□□□□□ -0.51
LDB3-207ENST00000542786 PRR30Q53SZ7 412 aaPredicted RBP11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms