RNA–Protein interactions for RNA: ENST00000542698.1

PRKAB1-207, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

TSL 1 (best)

Gene PRKAB1, Length 4,019 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-207ENST00000542698 FANCMQ8IYD8 2048 aa7.11□□□□□ -1.27
PRKAB1-207ENST00000542698 GPR179Q6PRD1 2367 aa7.11□□□□□ -1.27
PRKAB1-207ENST00000542698 PQLC2LA1A4F0 135 aa7.11□□□□□ -1.27
PRKAB1-207ENST00000542698 EIF3GO75821 320 aaKnown RBP eCLIP7.11□□□□□ -1.27
PRKAB1-207ENST00000542698 CYC1P08574 325 aa7.11□□□□□ -1.27
PRKAB1-207ENST00000542698 GALR1P47211 349 aa7.11□□□□□ -1.27
PRKAB1-207ENST00000542698 OR3A1P47881 315 aa7.11□□□□□ -1.27
PRKAB1-207ENST00000542698 OR10G4Q8NGN3 311 aa7.11□□□□□ -1.27
PRKAB1-207ENST00000542698 OR10G9Q8NGN4 311 aa7.11□□□□□ -1.27
PRKAB1-207ENST00000542698 OR10G7Q8NGN6 311 aa7.11□□□□□ -1.27
PRKAB1-207ENST00000542698 GALNT14Q96FL9 552 aa7.11□□□□□ -1.27
PRKAB1-207ENST00000542698 GPHA2Q96T91 129 aa7.11□□□□□ -1.27
PRKAB1-207ENST00000542698 TM2D1Q9BX74 207 aa7.11□□□□□ -1.27
PRKAB1-207ENST00000542698 SH3BGRL3Q9H299 93 aa7.11□□□□□ -1.27
PRKAB1-207ENST00000542698 ZNF319Q9P2F9 582 aa7.11□□□□□ -1.27
PRKAB1-207ENST00000542698 PRSS50Q9UI38 385 aa7.11□□□□□ -1.27
PRKAB1-207ENST00000542698 BRCA2P51587 3418 aa7.11□□□□□ -1.27
PRKAB1-207ENST00000542698 PI4KAP42356 2102 aa7.11□□□□□ -1.27
PRKAB1-207ENST00000542698 TRGV5A0A0B4J1U4 118 aa7.11□□□□□ -1.27
PRKAB1-207ENST00000542698 IGKV1-9A0A0C4DH69 117 aa7.11□□□□□ -1.27
PRKAB1-207ENST00000542698 MEX3AA1L020 520 aaKnown RBP7.11□□□□□ -1.27
PRKAB1-207ENST00000542698 CACNA1GO43497 2377 aa7.11□□□□□ -1.27
PRKAB1-207ENST00000542698 RPS2P15880 293 aaKnown RBP7.11□□□□□ -1.27
PRKAB1-207ENST00000542698 MDH2P40926 338 aaKnown RBP7.11□□□□□ -1.27
PRKAB1-207ENST00000542698 FGF12P61328 243 aa7.11□□□□□ -1.27
PRKAB1-207ENST00000542698 SRSF3P84103 164 aaKnown RBP7.11□□□□□ -1.27
PRKAB1-207ENST00000542698 C10orf128Q5T292 105 aa7.11□□□□□ -1.27
PRKAB1-207ENST00000542698 ASPHD2Q6ICH7 369 aa7.11□□□□□ -1.27
PRKAB1-207ENST00000542698 BTNL8Q6UX41 500 aa7.11□□□□□ -1.27
PRKAB1-207ENST00000542698 H1FOOQ8IZA3 346 aaPredicted RBP7.11□□□□□ -1.27
PRKAB1-207ENST00000542698 TAAR6Q96RI8 345 aa7.11□□□□□ -1.27
PRKAB1-207ENST00000542698 S1PR3Q99500 378 aa7.11□□□□□ -1.27
PRKAB1-207ENST00000542698 A0A1W2PQM1 296 aa7.11□□□□□ -1.27
PRKAB1-207ENST00000542698 F6UZH7 168 aa7.11□□□□□ -1.27
PRKAB1-207ENST00000542698 G3V3Q6 166 aa7.11□□□□□ -1.27
PRKAB1-207ENST00000542698 RRP8O43159 456 aaKnown RBP7.11□□□□□ -1.27
PRKAB1-207ENST00000542698 PSG2P11465 335 aa7.11□□□□□ -1.27
PRKAB1-207ENST00000542698 ATP6V1FQ16864 119 aa7.11□□□□□ -1.27
PRKAB1-207ENST00000542698 SMIM21Q3B7S5 101 aa7.11□□□□□ -1.27
PRKAB1-207ENST00000542698 RIPPLY2Q5TAB7 128 aa7.11□□□□□ -1.27
PRKAB1-207ENST00000542698 OR10S1Q8NGN2 331 aa7.11□□□□□ -1.27
PRKAB1-207ENST00000542698 OR4A4PQ8NGN8 299 aa7.11□□□□□ -1.27
PRKAB1-207ENST00000542698 POC1BQ8TC44 478 aa7.11□□□□□ -1.27
PRKAB1-207ENST00000542698 DNASE2BQ8WZ79 361 aa7.11□□□□□ -1.27
PRKAB1-207ENST00000542698 TMEM230Q96A57 120 aa7.11□□□□□ -1.27
PRKAB1-207ENST00000542698 PRO1933Q9H354 126 aa7.11□□□□□ -1.27
PRKAB1-207ENST00000542698 TMEM9BQ9NQ34 198 aa7.11□□□□□ -1.27
PRKAB1-207ENST00000542698 ELOA3CA0A087WX78 387 aaPredicted RBP7.1□□□□□ -1.27
PRKAB1-207ENST00000542698 A0A1W2PR80 420 aa7.1□□□□□ -1.27
PRKAB1-207ENST00000542698 NAT2P11245 290 aa7.1□□□□□ -1.27
PRKAB1-207ENST00000542698 GABRA4P48169 554 aa7.1□□□□□ -1.27
PRKAB1-207ENST00000542698 UCP3P55916 312 aa7.1□□□□□ -1.27
PRKAB1-207ENST00000542698 RND3P61587 244 aa7.1□□□□□ -1.27
PRKAB1-207ENST00000542698 ZXDAP98168 799 aa7.1□□□□□ -1.27
PRKAB1-207ENST00000542698 KCNMB1Q16558 191 aa7.1□□□□□ -1.27
PRKAB1-207ENST00000542698 BIVMQ86UB2 503 aa7.1□□□□□ -1.27
PRKAB1-207ENST00000542698 OR10A7Q8NGE5 316 aa7.1□□□□□ -1.27
PRKAB1-207ENST00000542698 CORO2AQ92828 525 aa7.1□□□□□ -1.27
PRKAB1-207ENST00000542698 FAM131CQ96AQ9 280 aa7.1□□□□□ -1.27
PRKAB1-207ENST00000542698 SNX22Q96L94 193 aa7.1□□□□□ -1.27
PRKAB1-207ENST00000542698 RARRES2Q99969 163 aa7.1□□□□□ -1.27
PRKAB1-207ENST00000542698 OR2D2Q9H210 308 aa7.1□□□□□ -1.27
PRKAB1-207ENST00000542698 HS3ST3B1Q9Y662 390 aa7.1□□□□□ -1.27
PRKAB1-207ENST00000542698 ATP23Q9Y6H3 246 aa7.1□□□□□ -1.27
PRKAB1-207ENST00000542698 RIF1Q5UIP0 2472 aaKnown RBP7.1□□□□□ -1.27
PRKAB1-207ENST00000542698 PLXNA4Q9HCM2 1894 aa7.1□□□□□ -1.27
PRKAB1-207ENST00000542698 XKRY2A2RUG3 117 aa7.1□□□□□ -1.27
PRKAB1-207ENST00000542698 CDIPTO14735 213 aa7.1□□□□□ -1.27
PRKAB1-207ENST00000542698 HSPB1P04792 205 aaKnown RBP7.1□□□□□ -1.27
PRKAB1-207ENST00000542698 MGST1P10620 155 aaKnown RBP7.1□□□□□ -1.27
PRKAB1-207ENST00000542698 MMP9P14780 707 aa7.1□□□□□ -1.27
PRKAB1-207ENST00000542698 HNF1AP20823 631 aa7.1□□□□□ -1.27
PRKAB1-207ENST00000542698 CHRNA7P36544 502 aa7.1□□□□□ -1.27
PRKAB1-207ENST00000542698 SUCLG1P53597 346 aaKnown RBP7.1□□□□□ -1.27
PRKAB1-207ENST00000542698 SERF2P84101 59 aa7.1□□□□□ -1.27
PRKAB1-207ENST00000542698 CEACAM21Q3KPI0 293 aa7.1□□□□□ -1.27
PRKAB1-207ENST00000542698 TIGITQ495A1 244 aa7.1□□□□□ -1.27
PRKAB1-207ENST00000542698 TRIB1Q96RU8 372 aa7.1□□□□□ -1.27
PRKAB1-207ENST00000542698 ZDHHC11Q9H8X9 412 aa7.1□□□□□ -1.27
PRKAB1-207ENST00000542698 NAT8Q9UHE5 227 aa7.1□□□□□ -1.27
PRKAB1-207ENST00000542698 V9GYS6 101 aa7.1□□□□□ -1.27
PRKAB1-207ENST00000542698 H0YL77 283 aa7.1□□□□□ -1.27
PRKAB1-207ENST00000542698 J3QT63 122 aa7.1□□□□□ -1.27
PRKAB1-207ENST00000542698 FAM89BQ8N5H3 189 aa7.1□□□□□ -1.27
PRKAB1-207ENST00000542698 DEFB108BQ8NET1 73 aa7.1□□□□□ -1.27
PRKAB1-207ENST00000542698 NEIL1Q96FI4 390 aaPredicted RBP7.1□□□□□ -1.27
PRKAB1-207ENST00000542698 ABHD14BQ96IU4 210 aa7.1□□□□□ -1.27
PRKAB1-207ENST00000542698 RSG1Q9BU20 258 aa7.1□□□□□ -1.27
PRKAB1-207ENST00000542698 TMEM147Q9BVK8 224 aa7.1□□□□□ -1.27
PRKAB1-207ENST00000542698 AKIRIN1Q9H9L7 192 aaPredicted RBP7.1□□□□□ -1.27
PRKAB1-207ENST00000542698 KIAA2026Q5HYC2 2103 aa7.1□□□□□ -1.27
PRKAB1-207ENST00000542698 TRBV6-7A0A0A0MS04 114 aa7.09□□□□□ -1.27
PRKAB1-207ENST00000542698 IGHV1-45A0A0A0MS14 117 aa7.09□□□□□ -1.27
PRKAB1-207ENST00000542698 NPBWR2P48146 333 aa7.09□□□□□ -1.27
PRKAB1-207ENST00000542698 ERVS71-1P61550 626 aa7.09□□□□□ -1.27
PRKAB1-207ENST00000542698 PPP1CBP62140 327 aa7.09□□□□□ -1.27
PRKAB1-207ENST00000542698 TGIF1Q15583 401 aa7.09□□□□□ -1.27
PRKAB1-207ENST00000542698 HFEQ30201 348 aa7.09□□□□□ -1.27
PRKAB1-207ENST00000542698 NFAM1Q8NET5 270 aaPredicted RBP7.09□□□□□ -1.27
PRKAB1-207ENST00000542698 OR2T10Q8NGZ9 312 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms