RNA–Protein interactions for RNA: ENST00000542685.5

XRCC4-206, Transcript of X-ray repair cross complementing 4, humanhuman

TSL 1 (best)

Gene XRCC4, Length 1,243 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-206ENST00000542685 AGMATQ9BSE5 352 aa4.98□□□□□ -1.61
XRCC4-206ENST00000542685 PSMG3Q9BT73 122 aaPredicted RBP4.98□□□□□ -1.61
XRCC4-206ENST00000542685 EFCAB11Q9BUY7 163 aa4.98□□□□□ -1.61
XRCC4-206ENST00000542685 ABHD6Q9BV23 337 aa4.98□□□□□ -1.61
XRCC4-206ENST00000542685 CHODLQ9H9P2 273 aa4.98□□□□□ -1.61
XRCC4-206ENST00000542685 CMC2Q9NRP2 79 aa4.98□□□□□ -1.61
XRCC4-206ENST00000542685 PLEKHJ1Q9NW61 149 aa4.98□□□□□ -1.61
XRCC4-206ENST00000542685 OR6C3Q9NZP0 311 aa4.98□□□□□ -1.61
XRCC4-206ENST00000542685 FLRT3Q9NZU0 649 aa4.98□□□□□ -1.61
XRCC4-206ENST00000542685 ZNF319Q9P2F9 582 aa4.98□□□□□ -1.61
XRCC4-206ENST00000542685 IL36RNQ9UBH0 155 aa4.98□□□□□ -1.61
XRCC4-206ENST00000542685 OR5V1Q9UGF6 321 aa4.98□□□□□ -1.61
XRCC4-206ENST00000542685 CRLS1Q9UJA2 301 aa4.98□□□□□ -1.61
XRCC4-206ENST00000542685 MRPS28Q9Y2Q9 187 aaKnown RBP4.98□□□□□ -1.61
XRCC4-206ENST00000542685 DOCK6Q96HP0 2047 aa4.97□□□□□ -1.61
XRCC4-206ENST00000542685 CCDC88CQ9P219 2028 aa4.97□□□□□ -1.61
XRCC4-206ENST00000542685 BPTFQ12830 3046 aa4.97□□□□□ -1.61
XRCC4-206ENST00000542685 TRAV9-1A0A075B6T8 112 aa4.97□□□□□ -1.61
XRCC4-206ENST00000542685 TRAV1-1A0A0B4J248 108 aa4.97□□□□□ -1.61
XRCC4-206ENST00000542685 ZNF320A2RRD8 509 aa4.97□□□□□ -1.61
XRCC4-206ENST00000542685 C17orf105B2RV13 164 aa4.97□□□□□ -1.61
XRCC4-206ENST00000542685 ZNF736B4DX44 427 aaPredicted RBP4.97□□□□□ -1.61
XRCC4-206ENST00000542685 J3QR89 54 aa4.97□□□□□ -1.61
XRCC4-206ENST00000542685 K7N7A8 449 aa4.97□□□□□ -1.61
XRCC4-206ENST00000542685 SIRPB1O00241 398 aa4.97□□□□□ -1.61
XRCC4-206ENST00000542685 LDB3O75112 727 aa4.97□□□□□ -1.61
XRCC4-206ENST00000542685 DDAH2O95865 285 aa4.97□□□□□ -1.61
XRCC4-206ENST00000542685 IGLC2P0DOY2 106 aa4.97□□□□□ -1.61
XRCC4-206ENST00000542685 IGLC3P0DOY3 106 aa4.97□□□□□ -1.61
XRCC4-206ENST00000542685 IL11P20809 199 aa4.97□□□□□ -1.61
XRCC4-206ENST00000542685 ARL3P36405 182 aa4.97□□□□□ -1.61
XRCC4-206ENST00000542685 P2RY2P41231 377 aa4.97□□□□□ -1.61
XRCC4-206ENST00000542685 TFPI2P48307 235 aa4.97□□□□□ -1.61
XRCC4-206ENST00000542685 AMTP48728 403 aa4.97□□□□□ -1.61
XRCC4-206ENST00000542685 SLC25A1P53007 311 aa4.97□□□□□ -1.61
XRCC4-206ENST00000542685 MTCP1P56278 107 aa4.97□□□□□ -1.61
XRCC4-206ENST00000542685 OR12D2P58182 307 aa4.97□□□□□ -1.61
XRCC4-206ENST00000542685 TBPL1P62380 186 aa4.97□□□□□ -1.61
XRCC4-206ENST00000542685 LCN6P62502 163 aa4.97□□□□□ -1.61
XRCC4-206ENST00000542685 ZNF92Q03936 586 aa4.97□□□□□ -1.61
XRCC4-206ENST00000542685 IL15RAQ13261 267 aa4.97□□□□□ -1.61
XRCC4-206ENST00000542685 GGTLC2Q14390 218 aa4.97□□□□□ -1.61
XRCC4-206ENST00000542685 ADIPOQQ15848 244 aa4.97□□□□□ -1.61
XRCC4-206ENST00000542685 PMCHL1Q16048 86 aa4.97□□□□□ -1.61
XRCC4-206ENST00000542685 ACKR1Q16570 336 aa4.97□□□□□ -1.61
XRCC4-206ENST00000542685 TMEM128Q5BJH2 165 aa4.97□□□□□ -1.61
XRCC4-206ENST00000542685 RAET1LQ5VY80 246 aa4.97□□□□□ -1.61
XRCC4-206ENST00000542685 DGAT2L7PQ6IED9 249 aa4.97□□□□□ -1.61
XRCC4-206ENST00000542685 ZNF343Q6P1L6 599 aa4.97□□□□□ -1.61
XRCC4-206ENST00000542685 KCNIP4Q6PIL6 250 aa4.97□□□□□ -1.61
XRCC4-206ENST00000542685 TPRG1Q6ZUI0 275 aa4.97□□□□□ -1.61
XRCC4-206ENST00000542685 H1FNTQ75WM6 255 aaPredicted RBP4.97□□□□□ -1.61
XRCC4-206ENST00000542685 WDR5BQ86VZ2 330 aa4.97□□□□□ -1.61
XRCC4-206ENST00000542685 CALHM1Q8IU99 346 aa4.97□□□□□ -1.61
XRCC4-206ENST00000542685 C1orf174Q8IYL3 243 aa4.97□□□□□ -1.61
XRCC4-206ENST00000542685 OR2T27Q8NH04 317 aa4.97□□□□□ -1.61
XRCC4-206ENST00000542685 DOK4Q8TEW6 326 aa4.97□□□□□ -1.61
XRCC4-206ENST00000542685 PSMF1Q92530 271 aa4.97□□□□□ -1.61
XRCC4-206ENST00000542685 UBE2E3Q969T4 207 aa4.97□□□□□ -1.61
XRCC4-206ENST00000542685 FGGYQ96C11 551 aa4.97□□□□□ -1.61
XRCC4-206ENST00000542685 ZMYND19Q96E35 227 aaPredicted RBP4.97□□□□□ -1.61
XRCC4-206ENST00000542685 ALG14Q96F25 216 aa4.97□□□□□ -1.61
XRCC4-206ENST00000542685 CAPNS2Q96L46 248 aa4.97□□□□□ -1.61
XRCC4-206ENST00000542685 SIGLEC12Q96PQ1 595 aa4.97□□□□□ -1.61
XRCC4-206ENST00000542685 MYADMQ96S97 322 aa4.97□□□□□ -1.61
XRCC4-206ENST00000542685 SIGMAR1Q99720 223 aa4.97□□□□□ -1.61
XRCC4-206ENST00000542685 RAB11FIP5Q9BXF6 653 aa4.97□□□□□ -1.61
XRCC4-206ENST00000542685 C1QTNF4Q9BXJ3 329 aa4.97□□□□□ -1.61
XRCC4-206ENST00000542685 NMNAT2Q9BZQ4 307 aa4.97□□□□□ -1.61
XRCC4-206ENST00000542685 ISG20L2Q9H9L3 353 aaKnown RBP4.97□□□□□ -1.61
XRCC4-206ENST00000542685 BCL2L10Q9HD36 194 aa4.97□□□□□ -1.61
XRCC4-206ENST00000542685 OR2S2Q9NQN1 319 aa4.97□□□□□ -1.61
XRCC4-206ENST00000542685 OCIAD1Q9NX40 245 aa4.97□□□□□ -1.61
XRCC4-206ENST00000542685 ABI3Q9P2A4 366 aa4.97□□□□□ -1.61
XRCC4-206ENST00000542685 IL36AQ9UHA7 158 aa4.97□□□□□ -1.61
XRCC4-206ENST00000542685 AK6Q9Y3D8 172 aaKnown RBP4.97□□□□□ -1.61
XRCC4-206ENST00000542685 WSB1Q9Y6I7 421 aa4.97□□□□□ -1.61
XRCC4-206ENST00000542685 DENND4CQ5VZ89 1909 aa4.97□□□□□ -1.61
XRCC4-206ENST00000542685 NUP214P35658 2090 aaPredicted RBP4.96□□□□□ -1.61
XRCC4-206ENST00000542685 PPIAL4EA0A075B759 164 aa4.96□□□□□ -1.62
XRCC4-206ENST00000542685 A0A087WYN8 130 aa4.96□□□□□ -1.62
XRCC4-206ENST00000542685 PPIAL4CA0A0B4J2A2 164 aa4.96□□□□□ -1.62
XRCC4-206ENST00000542685 A0A1B0GUV1 79 aa4.96□□□□□ -1.62
XRCC4-206ENST00000542685 IGLC7A0M8Q6 106 aa4.96□□□□□ -1.62
XRCC4-206ENST00000542685 TSPAN11A1L157 253 aa4.96□□□□□ -1.62
XRCC4-206ENST00000542685 OR4C45A6NMZ5 311 aa4.96□□□□□ -1.62
XRCC4-206ENST00000542685 B9A039 149 aa4.96□□□□□ -1.62
XRCC4-206ENST00000542685 PPIAL4DF5H284 164 aa4.96□□□□□ -1.62
XRCC4-206ENST00000542685 H7BYZ3 331 aa4.96□□□□□ -1.62
XRCC4-206ENST00000542685 SLC33A1O00400 549 aaPredicted RBP4.96□□□□□ -1.62
XRCC4-206ENST00000542685 SLC17A3O00476 420 aa4.96□□□□□ -1.62
XRCC4-206ENST00000542685 RAD51DO75771 328 aa4.96□□□□□ -1.62
XRCC4-206ENST00000542685 CLDN7O95471 211 aa4.96□□□□□ -1.62
XRCC4-206ENST00000542685 TBX6O95947 436 aaPredicted RBP4.96□□□□□ -1.62
XRCC4-206ENST00000542685 HRASP01112 189 aa4.96□□□□□ -1.62
XRCC4-206ENST00000542685 CD3DP04234 171 aa4.96□□□□□ -1.62
XRCC4-206ENST00000542685 PFN1P07737 140 aaKnown RBP4.96□□□□□ -1.62
XRCC4-206ENST00000542685 TACSTD2P09758 323 aa4.96□□□□□ -1.62
XRCC4-206ENST00000542685 PPIAL4FP0DN26 164 aa4.96□□□□□ -1.62
XRCC4-206ENST00000542685 PPIAL4GP0DN37 164 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms