RNA–Protein interactions for RNA: ENST00000542541.6

HOMER3-205, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-205ENST00000542541 FCGR3AP08637 254 aa19.03■□□□□ 0.64
HOMER3-205ENST00000542541 PTHLHP12272 177 aa19.03■□□□□ 0.64
HOMER3-205ENST00000542541 SRSF7Q16629 238 aaKnown RBP eCLIP19.03■□□□□ 0.64
HOMER3-205ENST00000542541 DCAF12L2Q5VW00 463 aa19.03■□□□□ 0.64
HOMER3-205ENST00000542541 ZNF880Q6PDB4 577 aa19.03■□□□□ 0.64
HOMER3-205ENST00000542541 KIR3DL3Q8N743 410 aa19.03■□□□□ 0.64
HOMER3-205ENST00000542541 OCSTAMPQ9BR26 566 aa19.03■□□□□ 0.64
HOMER3-205ENST00000542541 Q9N2K0 584 aa19.03■□□□□ 0.64
HOMER3-205ENST00000542541 ONECUT1Q9UBC0 465 aa19.03■□□□□ 0.64
HOMER3-205ENST00000542541 TRAV39A0A0B4J263 110 aa19.03■□□□□ 0.64
HOMER3-205ENST00000542541 LPLP06858 475 aa19.03■□□□□ 0.64
HOMER3-205ENST00000542541 INHBBP09529 407 aa19.03■□□□□ 0.64
HOMER3-205ENST00000542541 FOSL1P15407 271 aa19.03■□□□□ 0.64
HOMER3-205ENST00000542541 RCC1P18754 421 aaPredicted RBP19.03■□□□□ 0.64
HOMER3-205ENST00000542541 C1orf122Q6ZSJ8 110 aa19.03■□□□□ 0.64
HOMER3-205ENST00000542541 TCF23Q7RTU1 214 aa19.03■□□□□ 0.64
HOMER3-205ENST00000542541 KPTNQ9Y664 436 aa19.03■□□□□ 0.64
HOMER3-205ENST00000542541 KBTBD11-OT1A0A1B0GTJ5 212 aa19.02■□□□□ 0.64
HOMER3-205ENST00000542541 MEX3AA1L020 520 aaKnown RBP19.02■□□□□ 0.64
HOMER3-205ENST00000542541 M0R1W7 72 aa19.02■□□□□ 0.64
HOMER3-205ENST00000542541 CTDSPLO15194 276 aa19.02■□□□□ 0.64
HOMER3-205ENST00000542541 SSX5O60225 188 aa19.02■□□□□ 0.64
HOMER3-205ENST00000542541 CD99P14209 185 aa19.02■□□□□ 0.64
HOMER3-205ENST00000542541 ZNF45Q02386 682 aa19.02■□□□□ 0.64
HOMER3-205ENST00000542541 FCAMRQ8WWV6 532 aa19.02■□□□□ 0.64
HOMER3-205ENST00000542541 ST6GALNAC5Q9BVH7 336 aa19.02■□□□□ 0.64
HOMER3-205ENST00000542541 V9GYH0 126 aa19.02■□□□□ 0.64
HOMER3-205ENST00000542541 FLNAP21333 2647 aaKnown RBP19.02■□□□□ 0.63
HOMER3-205ENST00000542541 SPINT2O43291 252 aa19.01■□□□□ 0.63
HOMER3-205ENST00000542541 RBP4P02753 201 aa19.01■□□□□ 0.63
HOMER3-205ENST00000542541 CGB3P0DN86 165 aa19.01■□□□□ 0.63
HOMER3-205ENST00000542541 CGB7P0DN87 165 aa19.01■□□□□ 0.63
HOMER3-205ENST00000542541 CCL3L1P16619 93 aa19.01■□□□□ 0.63
HOMER3-205ENST00000542541 KIR2DS4P43632 304 aa19.01■□□□□ 0.63
HOMER3-205ENST00000542541 ARF6P62330 175 aa19.01■□□□□ 0.63
HOMER3-205ENST00000542541 KIR2DS1Q14954 304 aa19.01■□□□□ 0.63
HOMER3-205ENST00000542541 GPX8Q8TED1 209 aa19.01■□□□□ 0.63
HOMER3-205ENST00000542541 S100ZQ8WXG8 99 aa19.01■□□□□ 0.63
HOMER3-205ENST00000542541 ARL11Q969Q4 196 aa19.01■□□□□ 0.63
HOMER3-205ENST00000542541 TMUB1Q9BVT8 246 aa19.01■□□□□ 0.63
HOMER3-205ENST00000542541 TAF9BQ9HBM6 251 aa19.01■□□□□ 0.63
HOMER3-205ENST00000542541 CALYQ9NYX4 217 aa19.01■□□□□ 0.63
HOMER3-205ENST00000542541 CR1P17927 2039 aa19.01■□□□□ 0.63
HOMER3-205ENST00000542541 MEIOCA2RUB1 952 aa19■□□□□ 0.63
HOMER3-205ENST00000542541 GABARAPH6UMI1 98 aa19■□□□□ 0.63
HOMER3-205ENST00000542541 J3QLI3 93 aa19■□□□□ 0.63
HOMER3-205ENST00000542541 GUCA2AQ02747 115 aa19■□□□□ 0.63
HOMER3-205ENST00000542541 PAX8Q06710 450 aa19■□□□□ 0.63
HOMER3-205ENST00000542541 METTL11BQ5VVY1 283 aa19■□□□□ 0.63
HOMER3-205ENST00000542541 Q6ZS49 121 aa19■□□□□ 0.63
HOMER3-205ENST00000542541 GCDHQ92947 438 aaPredicted RBP19■□□□□ 0.63
HOMER3-205ENST00000542541 LINC00574Q9H8X3 128 aa19■□□□□ 0.63
HOMER3-205ENST00000542541 ZNF286AQ9HBT8 521 aa19■□□□□ 0.63
HOMER3-205ENST00000542541 IFT46Q9NQC8 304 aa19■□□□□ 0.63
HOMER3-205ENST00000542541 ZNF230Q9UIE0 474 aaPredicted RBP19■□□□□ 0.63
HOMER3-205ENST00000542541 C17orf98A8MV24 154 aa19■□□□□ 0.63
HOMER3-205ENST00000542541 TRDCB7Z8K6 153 aa19■□□□□ 0.63
HOMER3-205ENST00000542541 C12orf77C9JDV5 145 aa19■□□□□ 0.63
HOMER3-205ENST00000542541 ZNF16P17020 682 aaPredicted RBP19■□□□□ 0.63
HOMER3-205ENST00000542541 DLX6P56179 175 aa19■□□□□ 0.63
HOMER3-205ENST00000542541 C17orf58Q2M2W7 97 aa19■□□□□ 0.63
HOMER3-205ENST00000542541 PYDC2Q56P42 97 aa19■□□□□ 0.63
HOMER3-205ENST00000542541 FAHD2BQ6P2I3 314 aaPredicted RBP19■□□□□ 0.63
HOMER3-205ENST00000542541 FAHD2AQ96GK7 314 aa19■□□□□ 0.63
HOMER3-205ENST00000542541 NPIPB11E5RHQ5 1161 aa18.99■□□□□ 0.63
HOMER3-205ENST00000542541 RBBP9O75884 186 aa18.99■□□□□ 0.63
HOMER3-205ENST00000542541 HMGN3Q15651 99 aa18.99■□□□□ 0.63
HOMER3-205ENST00000542541 HEPN1Q6WQI6 88 aa18.99■□□□□ 0.63
HOMER3-205ENST00000542541 Q6ZPA2 131 aa18.99■□□□□ 0.63
HOMER3-205ENST00000542541 HOGA1Q86XE5 327 aa18.99■□□□□ 0.63
HOMER3-205ENST00000542541 OR10A7Q8NGE5 316 aa18.99■□□□□ 0.63
HOMER3-205ENST00000542541 GALMQ96C23 342 aa18.99■□□□□ 0.63
HOMER3-205ENST00000542541 C7orf69Q9H7B7 122 aa18.99■□□□□ 0.63
HOMER3-205ENST00000542541 METTL8Q9H825 291 aaKnown RBP18.99■□□□□ 0.63
HOMER3-205ENST00000542541 C15orf65H3BRN8 121 aa18.98■□□□□ 0.63
HOMER3-205ENST00000542541 CD5LO43866 347 aa18.98■□□□□ 0.63
HOMER3-205ENST00000542541 SSTR5P35346 364 aa18.98■□□□□ 0.63
HOMER3-205ENST00000542541 HLA-DRB3P79483 266 aa18.98■□□□□ 0.63
HOMER3-205ENST00000542541 TMEM30BQ3MIR4 351 aa18.98■□□□□ 0.63
HOMER3-205ENST00000542541 PRR18Q8N4B5 295 aa18.98■□□□□ 0.63
HOMER3-205ENST00000542541 RFESDQ8TAC1 157 aa18.98■□□□□ 0.63
HOMER3-205ENST00000542541 SMIM4Q8WVI0 70 aa18.98■□□□□ 0.63
HOMER3-205ENST00000542541 AUP1Q9Y679 476 aa18.98■□□□□ 0.63
HOMER3-205ENST00000542541 MEIS3P1A6NDR6 274 aa18.97■□□□□ 0.63
HOMER3-205ENST00000542541 TOX4O94842 621 aa18.97■□□□□ 0.63
HOMER3-205ENST00000542541 HBZP02008 142 aa18.97■□□□□ 0.63
HOMER3-205ENST00000542541 ACTBP60709 375 aa18.97■□□□□ 0.63
HOMER3-205ENST00000542541 ACTG1P63261 375 aa18.97■□□□□ 0.63
HOMER3-205ENST00000542541 SSBP1Q04837 148 aaKnown RBP18.97■□□□□ 0.63
HOMER3-205ENST00000542541 OR52W1Q6IF63 320 aa18.97■□□□□ 0.63
HOMER3-205ENST00000542541 C11orf42Q8N5U0 333 aa18.97■□□□□ 0.63
HOMER3-205ENST00000542541 BEST4Q8NFU0 473 aa18.97■□□□□ 0.63
HOMER3-205ENST00000542541 OR52I2Q8NH67 350 aa18.97■□□□□ 0.63
HOMER3-205ENST00000542541 MAFIPQ8WZ33 124 aa18.97■□□□□ 0.63
HOMER3-205ENST00000542541 KCNS2Q9ULS6 477 aa18.97■□□□□ 0.63
HOMER3-205ENST00000542541 YLPM1P49750 1951 aaKnown RBP18.97■□□□□ 0.63
HOMER3-205ENST00000542541 ABCA2Q9BZC7 2435 aa18.97■□□□□ 0.63
HOMER3-205ENST00000542541 ARHGAP32A7KAX9 2087 aa18.97■□□□□ 0.63
HOMER3-205ENST00000542541 HIVEP1P15822 2718 aa18.97■□□□□ 0.63
HOMER3-205ENST00000542541 FABP7O15540 132 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms