RNA–Protein interactions for RNA: ENST00000541888.2

AC005840.3-201, humanhuman

TSL 5 BASIC

Gene AC005840.3, Length 1,803 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC005840.3-201ENST00000541888 FAM74A3Q4VXF1 159 aa6.5□□□□□ -1.37
AC005840.3-201ENST00000541888 LIN54Q6MZP7 749 aa6.5□□□□□ -1.37
AC005840.3-201ENST00000541888 DUX4L9Q6RFH8 374 aaPredicted RBP6.5□□□□□ -1.37
AC005840.3-201ENST00000541888 ZNF600Q6ZNG1 722 aa6.5□□□□□ -1.37
AC005840.3-201ENST00000541888 CCDC54Q8NEL0 328 aa6.5□□□□□ -1.37
AC005840.3-201ENST00000541888 DMBX1Q8NFW5 382 aa6.5□□□□□ -1.37
AC005840.3-201ENST00000541888 MRPL24Q96A35 216 aaKnown RBP6.5□□□□□ -1.37
AC005840.3-201ENST00000541888 PHYHIPLQ96FC7 376 aa6.5□□□□□ -1.37
AC005840.3-201ENST00000541888 NARS2Q96I59 477 aaKnown RBP6.5□□□□□ -1.37
AC005840.3-201ENST00000541888 MICU1Q9BPX6 476 aa6.5□□□□□ -1.37
AC005840.3-201ENST00000541888 PDCD10Q9BUL8 212 aa6.5□□□□□ -1.37
AC005840.3-201ENST00000541888 MRI1Q9BV20 369 aa6.5□□□□□ -1.37
AC005840.3-201ENST00000541888 ST6GALNAC5Q9BVH7 336 aa6.5□□□□□ -1.37
AC005840.3-201ENST00000541888 TINAGL1Q9GZM7 467 aaPredicted RBP6.5□□□□□ -1.37
AC005840.3-201ENST00000541888 PLK3Q9H4B4 646 aa6.5□□□□□ -1.37
AC005840.3-201ENST00000541888 ESRP2Q9H6T0 727 aaKnown RBP6.5□□□□□ -1.37
AC005840.3-201ENST00000541888 PLEKHJ1Q9NW61 149 aa6.5□□□□□ -1.37
AC005840.3-201ENST00000541888 NKIRAS2Q9NYR9 191 aa6.5□□□□□ -1.37
AC005840.3-201ENST00000541888 AK3Q9UIJ7 227 aa6.5□□□□□ -1.37
AC005840.3-201ENST00000541888 FLVCR2Q9UPI3 526 aa6.5□□□□□ -1.37
AC005840.3-201ENST00000541888 IGLV3-9A0A075B6K5 115 aa6.5□□□□□ -1.37
AC005840.3-201ENST00000541888 FOXI3A8MTJ6 420 aaPredicted RBP6.5□□□□□ -1.37
AC005840.3-201ENST00000541888 NUDT19A8MXV4 375 aa6.5□□□□□ -1.37
AC005840.3-201ENST00000541888 J3QT63 122 aa6.5□□□□□ -1.37
AC005840.3-201ENST00000541888 LGALS8O00214 317 aa6.5□□□□□ -1.37
AC005840.3-201ENST00000541888 MFNGO00587 321 aa6.5□□□□□ -1.37
AC005840.3-201ENST00000541888 NUPL2O15504 423 aaKnown RBP6.5□□□□□ -1.37
AC005840.3-201ENST00000541888 NXPH2O95156 264 aa6.5□□□□□ -1.37
AC005840.3-201ENST00000541888 PTBP3O95758 552 aaKnown RBP6.5□□□□□ -1.37
AC005840.3-201ENST00000541888 CYB5R3P00387 301 aaPredicted RBP6.5□□□□□ -1.37
AC005840.3-201ENST00000541888 CD3EP07766 207 aa6.5□□□□□ -1.37
AC005840.3-201ENST00000541888 SELLP14151 372 aa6.5□□□□□ -1.37
AC005840.3-201ENST00000541888 SRSF1Q07955 248 aaKnown RBP eCLIP6.5□□□□□ -1.37
AC005840.3-201ENST00000541888 FBXL19-AS1Q494R0 122 aa6.5□□□□□ -1.37
AC005840.3-201ENST00000541888 FAM209BQ5JX69 171 aa6.5□□□□□ -1.37
AC005840.3-201ENST00000541888 ZNF660Q6AZW8 331 aaPredicted RBP6.5□□□□□ -1.37
AC005840.3-201ENST00000541888 ELP2Q6IA86 826 aa6.5□□□□□ -1.37
AC005840.3-201ENST00000541888 RAB12Q6IQ22 244 aa6.5□□□□□ -1.37
AC005840.3-201ENST00000541888 ATRAIDQ6UW56 229 aa6.5□□□□□ -1.37
AC005840.3-201ENST00000541888 ALKAL2Q6UX46 152 aa6.5□□□□□ -1.37
AC005840.3-201ENST00000541888 WDR82Q6UXN9 313 aa6.5□□□□□ -1.37
AC005840.3-201ENST00000541888 OR2W3Q7Z3T1 314 aa6.5□□□□□ -1.37
AC005840.3-201ENST00000541888 ZNF573Q86YE8 665 aa6.5□□□□□ -1.37
AC005840.3-201ENST00000541888 SVBPQ8N300 66 aa6.5□□□□□ -1.37
AC005840.3-201ENST00000541888 FGFRL1Q8N441 504 aa6.5□□□□□ -1.37
AC005840.3-201ENST00000541888 TPRX1Q8N7U7 411 aa6.5□□□□□ -1.37
AC005840.3-201ENST00000541888 BEST4Q8NFU0 473 aa6.5□□□□□ -1.37
AC005840.3-201ENST00000541888 OR4C16Q8NGL9 310 aa6.5□□□□□ -1.37
AC005840.3-201ENST00000541888 OR13G1Q8NGZ3 307 aa6.5□□□□□ -1.37
AC005840.3-201ENST00000541888 ZNF251Q9BRH9 671 aa6.5□□□□□ -1.37
AC005840.3-201ENST00000541888 TCEAL7Q9BRU2 100 aa6.5□□□□□ -1.37
AC005840.3-201ENST00000541888 URM1Q9BTM9 101 aaKnown RBP6.5□□□□□ -1.37
AC005840.3-201ENST00000541888 ARL6Q9H0F7 186 aa6.5□□□□□ -1.37
AC005840.3-201ENST00000541888 HRASLSQ9HDD0 168 aa6.5□□□□□ -1.37
AC005840.3-201ENST00000541888 RASL12Q9NYN1 266 aa6.5□□□□□ -1.37
AC005840.3-201ENST00000541888 CISD1Q9NZ45 108 aaKnown RBP6.5□□□□□ -1.37
AC005840.3-201ENST00000541888 OPN4Q9UHM6 478 aa6.5□□□□□ -1.37
AC005840.3-201ENST00000541888 GCN1Q92616 2671 aaKnown RBP6.5□□□□□ -1.37
AC005840.3-201ENST00000541888 YLPM1P49750 1951 aaKnown RBP6.49□□□□□ -1.37
AC005840.3-201ENST00000541888 LRP5LA4QPB2 252 aa6.49□□□□□ -1.37
AC005840.3-201ENST00000541888 OR5B21A6NL26 309 aa6.49□□□□□ -1.37
AC005840.3-201ENST00000541888 SDCBPO00560 298 aaPredicted RBP6.49□□□□□ -1.37
AC005840.3-201ENST00000541888 ARPC1BO15143 372 aaKnown RBP6.49□□□□□ -1.37
AC005840.3-201ENST00000541888 ATG12O94817 140 aa6.49□□□□□ -1.37
AC005840.3-201ENST00000541888 NDUFB6O95139 128 aa6.49□□□□□ -1.37
AC005840.3-201ENST00000541888 PMP2P02689 132 aa6.49□□□□□ -1.37
AC005840.3-201ENST00000541888 ZNF44P15621 663 aa6.49□□□□□ -1.37
AC005840.3-201ENST00000541888 PVALBP20472 110 aaPredicted RBP6.49□□□□□ -1.37
AC005840.3-201ENST00000541888 CPT2P23786 658 aa6.49□□□□□ -1.37
AC005840.3-201ENST00000541888 LOXP28300 417 aaPredicted RBP6.49□□□□□ -1.37
AC005840.3-201ENST00000541888 CHATP28329 748 aa6.49□□□□□ -1.37
AC005840.3-201ENST00000541888 CD80P33681 288 aa6.49□□□□□ -1.37
AC005840.3-201ENST00000541888 FAUP35544 74 aaKnown RBP6.49□□□□□ -1.37
AC005840.3-201ENST00000541888 SERPINF1P36955 418 aa6.49□□□□□ -1.37
AC005840.3-201ENST00000541888 SCAND1P57086 179 aa6.49□□□□□ -1.37
AC005840.3-201ENST00000541888 SSTP61278 116 aa6.49□□□□□ -1.37
AC005840.3-201ENST00000541888 DEFA5Q01523 94 aa6.49□□□□□ -1.37
AC005840.3-201ENST00000541888 ATXN7L3Q14CW9 347 aaPredicted RBP6.49□□□□□ -1.37
AC005840.3-201ENST00000541888 DHRS7BQ6IAN0 325 aaPredicted RBP6.49□□□□□ -1.37
AC005840.3-201ENST00000541888 UNQ6126/PRO20091Q6UXV3 157 aa6.49□□□□□ -1.37
AC005840.3-201ENST00000541888 ASCL4Q6XD76 172 aa6.49□□□□□ -1.37
AC005840.3-201ENST00000541888 MKXQ8IYA7 352 aa6.49□□□□□ -1.37
AC005840.3-201ENST00000541888 SPAG16Q8N0X2 631 aa6.49□□□□□ -1.37
AC005840.3-201ENST00000541888 FAM58AQ8N1B3 248 aa6.49□□□□□ -1.37
AC005840.3-201ENST00000541888 DEFB108BQ8NET1 73 aa6.49□□□□□ -1.37
AC005840.3-201ENST00000541888 OR56B1Q8NGI3 324 aa6.49□□□□□ -1.37
AC005840.3-201ENST00000541888 NEK7Q8TDX7 302 aa6.49□□□□□ -1.37
AC005840.3-201ENST00000541888 GPX8Q8TED1 209 aa6.49□□□□□ -1.37
AC005840.3-201ENST00000541888 LRRC29Q8WV35 223 aa6.49□□□□□ -1.37
AC005840.3-201ENST00000541888 VRK1Q99986 396 aaPredicted RBP6.49□□□□□ -1.37
AC005840.3-201ENST00000541888 CHIAQ9BZP6 476 aa6.49□□□□□ -1.37
AC005840.3-201ENST00000541888 CXXC4Q9H2H0 198 aa6.49□□□□□ -1.37
AC005840.3-201ENST00000541888 RNF115Q9Y4L5 304 aa6.49□□□□□ -1.37
AC005840.3-201ENST00000541888 POLQO75417 2590 aa6.49□□□□□ -1.37
AC005840.3-201ENST00000541888 A0A0D9SG52 128 aa6.48□□□□□ -1.37
AC005840.3-201ENST00000541888 ANKRD20A5PA0PJZ0 165 aa6.48□□□□□ -1.37
AC005840.3-201ENST00000541888 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP6.48□□□□□ -1.37
AC005840.3-201ENST00000541888 H7C417 338 aa6.48□□□□□ -1.37
AC005840.3-201ENST00000541888 ARPC5O15511 151 aa6.48□□□□□ -1.37
AC005840.3-201ENST00000541888 RBBP9O75884 186 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms