RNA–Protein interactions for RNA: ENST00000541586.5

CCM2-218, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,719 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-218ENST00000541586 DLL4Q9NR61 685 aa23.15■■□□□ 1.3
CCM2-218ENST00000541586 CYSRT1A8MQ03 144 aa23.14■■□□□ 1.3
CCM2-218ENST00000541586 IL5P05113 134 aa23.14■■□□□ 1.3
CCM2-218ENST00000541586 AESQ08117 197 aa23.14■■□□□ 1.3
CCM2-218ENST00000541586 CD300CQ08708 224 aa23.14■■□□□ 1.3
CCM2-218ENST00000541586 METTL11BQ5VVY1 283 aa23.14■■□□□ 1.3
CCM2-218ENST00000541586 TEX36Q5VZQ5 186 aa23.14■■□□□ 1.3
CCM2-218ENST00000541586 STUMQ69YW2 141 aa23.14■■□□□ 1.3
CCM2-218ENST00000541586 DHRS11Q6UWP2 260 aa23.14■■□□□ 1.3
CCM2-218ENST00000541586 DEFB108BQ8NET1 73 aa23.14■■□□□ 1.3
CCM2-218ENST00000541586 OR51J1Q9H342 316 aa23.14■■□□□ 1.3
CCM2-218ENST00000541586 TMEM106BQ9NUM4 274 aa23.14■■□□□ 1.3
CCM2-218ENST00000541586 TRAPPC2LQ9UL33 140 aa23.14■■□□□ 1.3
CCM2-218ENST00000541586 TRAV39A0A0B4J263 110 aa23.13■■□□□ 1.29
CCM2-218ENST00000541586 TMEM30CPA0ZSE6 113 aa23.13■■□□□ 1.29
CCM2-218ENST00000541586 OOEPA6NGQ2 149 aa23.13■■□□□ 1.29
CCM2-218ENST00000541586 OR5H14A6NHG9 310 aa23.13■■□□□ 1.29
CCM2-218ENST00000541586 CEACAM18A8MTB9 384 aa23.13■■□□□ 1.29
CCM2-218ENST00000541586 TMEM178BH3BS89 294 aa23.13■■□□□ 1.29
CCM2-218ENST00000541586 MUC1P15941 1255 aaPredicted RBP23.13■■□□□ 1.29
CCM2-218ENST00000541586 PDLIM4P50479 330 aa23.13■■□□□ 1.29
CCM2-218ENST00000541586 CLEC2AQ6UVW9 174 aa23.13■■□□□ 1.29
CCM2-218ENST00000541586 MOB1BQ7L9L4 216 aa23.13■■□□□ 1.29
CCM2-218ENST00000541586 C1orf87Q8N0U7 546 aa23.13■■□□□ 1.29
CCM2-218ENST00000541586 COQ2Q96H96 371 aa23.13■■□□□ 1.29
CCM2-218ENST00000541586 MED30Q96HR3 178 aa23.13■■□□□ 1.29
CCM2-218ENST00000541586 ALX4Q9H161 411 aaPredicted RBP23.13■■□□□ 1.29
CCM2-218ENST00000541586 CCDC168Q8NDH2 2452 aa23.13■■□□□ 1.29
CCM2-218ENST00000541586 CLEC12BQ2HXU8 276 aa23.13■■□□□ 1.29
CCM2-218ENST00000541586 Q5PR19 223 aa23.13■■□□□ 1.29
CCM2-218ENST00000541586 SLC35E4Q6ICL7 350 aa23.13■■□□□ 1.29
CCM2-218ENST00000541586 AKAP14Q86UN6 197 aa23.13■■□□□ 1.29
CCM2-218ENST00000541586 CAPSLQ8WWF8 208 aa23.13■■□□□ 1.29
CCM2-218ENST00000541586 SNX22Q96L94 193 aa23.13■■□□□ 1.29
CCM2-218ENST00000541586 TMPRSS13Q9BYE2 586 aa23.13■■□□□ 1.29
CCM2-218ENST00000541586 CHODLQ9H9P2 273 aa23.13■■□□□ 1.29
CCM2-218ENST00000541586 MBNL3Q9NUK0 354 aaKnown RBP23.13■■□□□ 1.29
CCM2-218ENST00000541586 ZNF221Q9UK13 617 aa23.13■■□□□ 1.29
CCM2-218ENST00000541586 MAP1AP78559 2803 aaPredicted RBP23.12■■□□□ 1.29
CCM2-218ENST00000541586 PPIHO43447 177 aaKnown RBP23.12■■□□□ 1.29
CCM2-218ENST00000541586 TRAPPC2P0DI81 140 aa23.12■■□□□ 1.29
CCM2-218ENST00000541586 TRAPPC2BP0DI82 140 aa23.12■■□□□ 1.29
CCM2-218ENST00000541586 PRRC2AP48634 2157 aaKnown RBP23.12■■□□□ 1.29
CCM2-218ENST00000541586 RRAS2P62070 204 aaPredicted RBP23.12■■□□□ 1.29
CCM2-218ENST00000541586 HLA-DRB3P79483 266 aa23.12■■□□□ 1.29
CCM2-218ENST00000541586 MRPS11P82912 194 aaKnown RBP23.12■■□□□ 1.29
CCM2-218ENST00000541586 HERPUD1Q15011 391 aa23.12■■□□□ 1.29
CCM2-218ENST00000541586 FAM168AQ92567 244 aa23.12■■□□□ 1.29
CCM2-218ENST00000541586 KIF25Q9UIL4 384 aa23.12■■□□□ 1.29
CCM2-218ENST00000541586 RP2O75695 350 aa23.11■■□□□ 1.29
CCM2-218ENST00000541586 FPR2P25090 351 aa23.11■■□□□ 1.29
CCM2-218ENST00000541586 SEC61A1P61619 476 aaKnown RBP23.11■■□□□ 1.29
CCM2-218ENST00000541586 ZNRF1Q8ND25 227 aa23.11■■□□□ 1.29
CCM2-218ENST00000541586 FOXC2Q99958 501 aa23.11■■□□□ 1.29
CCM2-218ENST00000541586 MYOZ1Q9NP98 299 aaPredicted RBP23.11■■□□□ 1.29
CCM2-218ENST00000541586 GPR132Q9UNW8 380 aa23.11■■□□□ 1.29
CCM2-218ENST00000541586 MAB21L2Q9Y586 359 aa23.11■■□□□ 1.29
CCM2-218ENST00000541586 IGKV1-6A0A0C4DH72 117 aa23.11■■□□□ 1.29
CCM2-218ENST00000541586 FCGR2CP31995 323 aa23.11■■□□□ 1.29
CCM2-218ENST00000541586 GLP1RP43220 463 aa23.11■■□□□ 1.29
CCM2-218ENST00000541586 PAX5Q02548 391 aa23.11■■□□□ 1.29
CCM2-218ENST00000541586 KRBOX4Q5JUW0 171 aa23.11■■□□□ 1.29
CCM2-218ENST00000541586 PEG10Q86TG7 708 aaKnown RBP23.11■■□□□ 1.29
CCM2-218ENST00000541586 ZNF554Q86TJ5 538 aa23.11■■□□□ 1.29
CCM2-218ENST00000541586 OR52B4Q8NGK2 314 aa23.11■■□□□ 1.29
CCM2-218ENST00000541586 SDSLQ96GA7 329 aa23.11■■□□□ 1.29
CCM2-218ENST00000541586 GPN1Q9HCN4 374 aaPredicted RBP23.11■■□□□ 1.29
CCM2-218ENST00000541586 MGAT4AQ9UM21 535 aa23.11■■□□□ 1.29
CCM2-218ENST00000541586 LGALS8O00214 317 aa23.1■■□□□ 1.29
CCM2-218ENST00000541586 BET1O15155 118 aa23.1■■□□□ 1.29
CCM2-218ENST00000541586 GYPAP02724 150 aa23.1■■□□□ 1.29
CCM2-218ENST00000541586 TMEM33P57088 247 aa23.1■■□□□ 1.29
CCM2-218ENST00000541586 BAMBIQ13145 260 aa23.1■■□□□ 1.29
CCM2-218ENST00000541586 ZNF561Q8N587 486 aa23.1■■□□□ 1.29
CCM2-218ENST00000541586 OR4A4PQ8NGN8 299 aa23.1■■□□□ 1.29
CCM2-218ENST00000541586 PPP1R35Q8TAP8 253 aa23.1■■□□□ 1.29
CCM2-218ENST00000541586 PPP1R14BQ96C90 147 aa23.1■■□□□ 1.29
CCM2-218ENST00000541586 MED28Q9H204 178 aa23.1■■□□□ 1.29
CCM2-218ENST00000541586 TANC2Q9HCD6 1990 aa23.09■■□□□ 1.29
CCM2-218ENST00000541586 K7N7A8 449 aa23.09■■□□□ 1.29
CCM2-218ENST00000541586 CCNKO75909 580 aa23.09■■□□□ 1.29
CCM2-218ENST00000541586 CTXN2P0C2S0 81 aa23.09■■□□□ 1.29
CCM2-218ENST00000541586 OR4E1P0C645 316 aa23.09■■□□□ 1.29
CCM2-218ENST00000541586 GLIPR1P48060 266 aa23.09■■□□□ 1.29
CCM2-218ENST00000541586 C4orf46Q504U0 113 aa23.09■■□□□ 1.29
CCM2-218ENST00000541586 ZNF626Q68DY1 528 aa23.09■■□□□ 1.29
CCM2-218ENST00000541586 SLC25A42Q86VD7 318 aa23.09■■□□□ 1.29
CCM2-218ENST00000541586 ADAD2Q8NCV1 583 aaKnown RBP23.09■■□□□ 1.29
CCM2-218ENST00000541586 SCGB3A2Q96PL1 93 aa23.09■■□□□ 1.29
CCM2-218ENST00000541586 C5orf66Q9H5L9 145 aa23.09■■□□□ 1.29
CCM2-218ENST00000541586 AKAP9Q99996 3911 aa23.08■■□□□ 1.29
CCM2-218ENST00000541586 PPIAL4EA0A075B759 164 aa23.08■■□□□ 1.29
CCM2-218ENST00000541586 MEIKINA0A087WXM9 373 aa23.08■■□□□ 1.29
CCM2-218ENST00000541586 TRAV38-1A0A0B4J264 116 aa23.08■■□□□ 1.29
CCM2-218ENST00000541586 SNRPGP15A8MWD9 76 aa23.08■■□□□ 1.29
CCM2-218ENST00000541586 PPIAL4DF5H284 164 aa23.08■■□□□ 1.29
CCM2-218ENST00000541586 PPIAL4FP0DN26 164 aa23.08■■□□□ 1.29
CCM2-218ENST00000541586 NFYAP23511 347 aaPredicted RBP23.08■■□□□ 1.29
CCM2-218ENST00000541586 AVPI1Q5T686 147 aa23.08■■□□□ 1.29
CCM2-218ENST00000541586 TPRX1Q8N7U7 411 aa23.08■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms