RNA–Protein interactions for RNA: ENST00000541342.2

SPIDR-227, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SPIDR, Length 3,311 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-227ENST00000541342 LGI3Q8N145 548 aa14.66□□□□□ -0.06
SPIDR-227ENST00000541342 OSR2Q8N2R0 312 aa14.66□□□□□ -0.06
SPIDR-227ENST00000541342 TMEM171Q8WVE6 324 aa14.66□□□□□ -0.06
SPIDR-227ENST00000541342 ST3GAL6Q9Y274 331 aa14.66□□□□□ -0.06
SPIDR-227ENST00000541342 GPR37O15354 613 aa14.65□□□□□ -0.06
SPIDR-227ENST00000541342 RPS23P62266 143 aaKnown RBP14.65□□□□□ -0.06
SPIDR-227ENST00000541342 OR1J1Q8NGS3 322 aa14.65□□□□□ -0.06
SPIDR-227ENST00000541342 FAM213BQ8TBF2 198 aa14.65□□□□□ -0.06
SPIDR-227ENST00000541342 MALSU1Q96EH3 234 aa14.65□□□□□ -0.06
SPIDR-227ENST00000541342 BORCS8Q96FH0 119 aa14.65□□□□□ -0.06
SPIDR-227ENST00000541342 PLSCR2Q9NRY7 297 aa14.65□□□□□ -0.06
SPIDR-227ENST00000541342 UCP3P55916 312 aa14.65□□□□□ -0.06
SPIDR-227ENST00000541342 CNN3Q15417 329 aaKnown RBP14.65□□□□□ -0.06
SPIDR-227ENST00000541342 IGSF11Q5DX21 431 aa14.65□□□□□ -0.06
SPIDR-227ENST00000541342 ADAM5Q6NVV9 412 aa14.65□□□□□ -0.06
SPIDR-227ENST00000541342 MEX3BQ6ZN04 569 aaKnown RBP14.65□□□□□ -0.06
SPIDR-227ENST00000541342 ODF3L1Q8IXM7 274 aa14.65□□□□□ -0.06
SPIDR-227ENST00000541342 CD300LFQ8TDQ1 290 aa14.65□□□□□ -0.06
SPIDR-227ENST00000541342 IGSF23A1L1A6 192 aa14.64□□□□□ -0.07
SPIDR-227ENST00000541342 NKX2-6A6NCS4 301 aa14.64□□□□□ -0.07
SPIDR-227ENST00000541342 CLN5O75503 358 aa14.64□□□□□ -0.07
SPIDR-227ENST00000541342 NRASP01111 189 aa14.64□□□□□ -0.07
SPIDR-227ENST00000541342 COX5BP10606 129 aa14.64□□□□□ -0.07
SPIDR-227ENST00000541342 NQO2P16083 231 aa14.64□□□□□ -0.07
SPIDR-227ENST00000541342 IGFL3Q6UXB1 125 aa14.64□□□□□ -0.07
SPIDR-227ENST00000541342 LHFPL2Q6ZUX7 228 aa14.64□□□□□ -0.07
SPIDR-227ENST00000541342 ZADH2Q8N4Q0 377 aa14.64□□□□□ -0.07
SPIDR-227ENST00000541342 BCL2L2Q92843 193 aaPredicted RBP14.64□□□□□ -0.07
SPIDR-227ENST00000541342 NIT2Q9NQR4 276 aa14.64□□□□□ -0.07
SPIDR-227ENST00000541342 SPTBN2O15020 2390 aa14.64□□□□□ -0.07
SPIDR-227ENST00000541342 A0A1B0GW64 132 aa14.64□□□□□ -0.07
SPIDR-227ENST00000541342 FAM24AA6NFZ4 105 aa14.64□□□□□ -0.07
SPIDR-227ENST00000541342 GUSBP1Q15486 140 aa14.64□□□□□ -0.07
SPIDR-227ENST00000541342 SPSB3Q6PJ21 355 aa14.64□□□□□ -0.07
SPIDR-227ENST00000541342 BATF2Q8N1L9 274 aa14.64□□□□□ -0.07
SPIDR-227ENST00000541342 POM121L2Q96KW2 1035 aa14.64□□□□□ -0.07
SPIDR-227ENST00000541342 KCNJ16Q9NPI9 418 aa14.64□□□□□ -0.07
SPIDR-227ENST00000541342 PPIHO43447 177 aaKnown RBP14.64□□□□□ -0.07
SPIDR-227ENST00000541342 MAS1LP35410 378 aa14.64□□□□□ -0.07
SPIDR-227ENST00000541342 ARR3P36575 388 aa14.64□□□□□ -0.07
SPIDR-227ENST00000541342 CLINT1Q14677 625 aa14.64□□□□□ -0.07
SPIDR-227ENST00000541342 SP5Q6BEB4 398 aaPredicted RBP14.64□□□□□ -0.07
SPIDR-227ENST00000541342 CALHM1Q8IU99 346 aa14.64□□□□□ -0.07
SPIDR-227ENST00000541342 ZNF286AQ9HBT8 521 aa14.64□□□□□ -0.07
SPIDR-227ENST00000541342 TMED3Q9Y3Q3 217 aa14.64□□□□□ -0.07
SPIDR-227ENST00000541342 K7EM74 188 aa14.63□□□□□ -0.07
SPIDR-227ENST00000541342 IL36GQ9NZH8 169 aa14.63□□□□□ -0.07
SPIDR-227ENST00000541342 PPYP01298 95 aa14.63□□□□□ -0.07
SPIDR-227ENST00000541342 GNRHRP30968 328 aa14.63□□□□□ -0.07
SPIDR-227ENST00000541342 OR2C3Q8N628 320 aa14.63□□□□□ -0.07
SPIDR-227ENST00000541342 GPHA2Q96T91 129 aa14.63□□□□□ -0.07
SPIDR-227ENST00000541342 CRIM1Q9NZV1 1036 aa14.63□□□□□ -0.07
SPIDR-227ENST00000541342 C3orf85A0A1B0GTC6 90 aa14.63□□□□□ -0.07
SPIDR-227ENST00000541342 MPPED1O15442 326 aa14.63□□□□□ -0.07
SPIDR-227ENST00000541342 PDCD6O75340 191 aa14.63□□□□□ -0.07
SPIDR-227ENST00000541342 NGFP01138 241 aa14.63□□□□□ -0.07
SPIDR-227ENST00000541342 ATP6V0CP27449 155 aa14.63□□□□□ -0.07
SPIDR-227ENST00000541342 RBM11P57052 281 aaKnown RBP14.63□□□□□ -0.07
SPIDR-227ENST00000541342 EDARADDQ8WWZ3 215 aa14.63□□□□□ -0.07
SPIDR-227ENST00000541342 NPBWR2P48146 333 aa14.62□□□□□ -0.07
SPIDR-227ENST00000541342 POLR2GP62487 172 aaKnown RBP eCLIP14.62□□□□□ -0.07
SPIDR-227ENST00000541342 C9orf106Q8NAJ2 232 aa14.62□□□□□ -0.07
SPIDR-227ENST00000541342 SYT3Q9BQG1 590 aa14.62□□□□□ -0.07
SPIDR-227ENST00000541342 PBDC1Q9BVG4 233 aa14.62□□□□□ -0.07
SPIDR-227ENST00000541342 REPIN1Q9BWE0 567 aaKnown RBP14.62□□□□□ -0.07
SPIDR-227ENST00000541342 TMEM222Q9H0R3 208 aa14.62□□□□□ -0.07
SPIDR-227ENST00000541342 GLRX2Q9NS18 164 aa14.62□□□□□ -0.07
SPIDR-227ENST00000541342 HAGHQ16775 308 aa14.62□□□□□ -0.07
SPIDR-227ENST00000541342 HEPN1Q6WQI6 88 aa14.62□□□□□ -0.07
SPIDR-227ENST00000541342 ANKRD11Q6UB99 2663 aaPredicted RBP14.61□□□□□ -0.07
SPIDR-227ENST00000541342 TMEM50AO95807 157 aa14.61□□□□□ -0.07
SPIDR-227ENST00000541342 IGHV1-2P23083 117 aa14.61□□□□□ -0.07
SPIDR-227ENST00000541342 FAM214BQ7L5A3 538 aa14.61□□□□□ -0.07
SPIDR-227ENST00000541342 ZNF565Q8N9K5 539 aa14.61□□□□□ -0.07
SPIDR-227ENST00000541342 PIGCQ92535 297 aa14.61□□□□□ -0.07
SPIDR-227ENST00000541342 SARAFQ96BY9 339 aa14.61□□□□□ -0.07
SPIDR-227ENST00000541342 PUS1Q9Y606 427 aaKnown RBP eCLIP14.61□□□□□ -0.07
SPIDR-227ENST00000541342 ZNF816-ZNF321PA0A0X1KG74 233 aa14.61□□□□□ -0.07
SPIDR-227ENST00000541342 TRDCB7Z8K6 153 aa14.61□□□□□ -0.07
SPIDR-227ENST00000541342 S100A9P06702 114 aaKnown RBP14.61□□□□□ -0.07
SPIDR-227ENST00000541342 EPHA1P21709 976 aa14.61□□□□□ -0.07
SPIDR-227ENST00000541342 MDP1Q86V88 176 aa14.61□□□□□ -0.07
SPIDR-227ENST00000541342 OMGP23515 440 aa14.61□□□□□ -0.07
SPIDR-227ENST00000541342 WNT5AP41221 380 aa14.61□□□□□ -0.07
SPIDR-227ENST00000541342 FOXC1Q12948 553 aa14.61□□□□□ -0.07
SPIDR-227ENST00000541342 GNMTQ14749 295 aa14.61□□□□□ -0.07
SPIDR-227ENST00000541342 CXorf66Q5JRM2 361 aaPredicted RBP14.61□□□□□ -0.07
SPIDR-227ENST00000541342 LFNGQ8NES3 379 aa14.61□□□□□ -0.07
SPIDR-227ENST00000541342 MIOXQ9UGB7 285 aa14.61□□□□□ -0.07
SPIDR-227ENST00000541342 AP4M1O00189 453 aa14.6□□□□□ -0.07
SPIDR-227ENST00000541342 PITX3O75364 302 aa14.6□□□□□ -0.07
SPIDR-227ENST00000541342 CDS2O95674 445 aa14.6□□□□□ -0.07
SPIDR-227ENST00000541342 SOHLH1Q5JUK2 328 aa14.6□□□□□ -0.07
SPIDR-227ENST00000541342 TMEM211Q6ICI0 200 aa14.6□□□□□ -0.07
SPIDR-227ENST00000541342 Q6ZS92 163 aa14.6□□□□□ -0.07
SPIDR-227ENST00000541342 MYPOPQ86VE0 399 aaPredicted RBP14.6□□□□□ -0.07
SPIDR-227ENST00000541342 OR56B2PQ8NGI1 322 aa14.6□□□□□ -0.07
SPIDR-227ENST00000541342 OR2G3Q8NGZ4 309 aa14.6□□□□□ -0.07
SPIDR-227ENST00000541342 APOBEC3DQ96AK3 386 aaPredicted RBP14.6□□□□□ -0.07
SPIDR-227ENST00000541342 MAGT1Q9H0U3 335 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms