RNA–Protein interactions for RNA: ENST00000541108.1

CLIP1-215, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 1 (best)

Gene CLIP1, Length 1,658 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-215ENST00000541108 TAF9BQ9HBM6 251 aa14.76□□□□□ -0.05
CLIP1-215ENST00000541108 GPR132Q9UNW8 380 aa14.76□□□□□ -0.05
CLIP1-215ENST00000541108 TRBV6-7A0A0A0MS04 114 aa14.75□□□□□ -0.05
CLIP1-215ENST00000541108 ODAMA1E959 279 aa14.75□□□□□ -0.05
CLIP1-215ENST00000541108 LYNX1G3V0Z9 82 aa14.75□□□□□ -0.05
CLIP1-215ENST00000541108 RLN1P04808 185 aa14.75□□□□□ -0.05
CLIP1-215ENST00000541108 IL5P05113 134 aa14.75□□□□□ -0.05
CLIP1-215ENST00000541108 LYNX1P0DP58 116 aa14.75□□□□□ -0.05
CLIP1-215ENST00000541108 FPR2P25090 351 aa14.75□□□□□ -0.05
CLIP1-215ENST00000541108 FCGR2CP31995 323 aa14.75□□□□□ -0.05
CLIP1-215ENST00000541108 CDKN1AP38936 164 aa14.75□□□□□ -0.05
CLIP1-215ENST00000541108 EFNA4P52798 201 aa14.75□□□□□ -0.05
CLIP1-215ENST00000541108 EDDM3AQ14507 147 aa14.75□□□□□ -0.05
CLIP1-215ENST00000541108 MUC20Q8N307 709 aaPredicted RBP14.75□□□□□ -0.05
CLIP1-215ENST00000541108 FAM216BQ8N7L0 139 aa14.75□□□□□ -0.05
CLIP1-215ENST00000541108 CHAC2Q8WUX2 184 aa14.75□□□□□ -0.05
CLIP1-215ENST00000541108 GALMQ96C23 342 aa14.75□□□□□ -0.05
CLIP1-215ENST00000541108 TIMD4Q96H15 378 aa14.75□□□□□ -0.05
CLIP1-215ENST00000541108 CHODLQ9H9P2 273 aa14.75□□□□□ -0.05
CLIP1-215ENST00000541108 OR6C3Q9NZP0 311 aa14.75□□□□□ -0.05
CLIP1-215ENST00000541108 IGKV1-6A0A0C4DH72 117 aa14.74□□□□□ -0.05
CLIP1-215ENST00000541108 OR5H14A6NHG9 310 aa14.74□□□□□ -0.05
CLIP1-215ENST00000541108 IGHV2-70P01814 119 aa14.74□□□□□ -0.05
CLIP1-215ENST00000541108 METTL11BQ5VVY1 283 aa14.74□□□□□ -0.05
CLIP1-215ENST00000541108 GLDNQ6ZMI3 551 aaPredicted RBP14.74□□□□□ -0.05
CLIP1-215ENST00000541108 TPRX1Q8N7U7 411 aa14.74□□□□□ -0.05
CLIP1-215ENST00000541108 OR10J5Q8NHC4 309 aa14.74□□□□□ -0.05
CLIP1-215ENST00000541108 MARCH1Q8TCQ1 289 aa14.74□□□□□ -0.05
CLIP1-215ENST00000541108 RAB1CQ92928 201 aa14.74□□□□□ -0.05
CLIP1-215ENST00000541108 KIRREL1Q96J84 757 aa14.74□□□□□ -0.05
CLIP1-215ENST00000541108 GHITMQ9H3K2 345 aa14.74□□□□□ -0.05
CLIP1-215ENST00000541108 LIME1Q9H400 295 aa14.74□□□□□ -0.05
CLIP1-215ENST00000541108 SLC25A10Q9UBX3 287 aaPredicted RBP14.74□□□□□ -0.05
CLIP1-215ENST00000541108 VSIG4Q9Y279 399 aa14.74□□□□□ -0.05
CLIP1-215ENST00000541108 ALG5Q9Y673 324 aa14.74□□□□□ -0.05
CLIP1-215ENST00000541108 LRRK2Q5S007 2527 aa14.74□□□□□ -0.05
CLIP1-215ENST00000541108 TRAV39A0A0B4J263 110 aa14.74□□□□□ -0.05
CLIP1-215ENST00000541108 A1L4Q6 167 aa14.74□□□□□ -0.05
CLIP1-215ENST00000541108 BET1O15155 118 aa14.74□□□□□ -0.05
CLIP1-215ENST00000541108 ADAM20O43506 726 aa14.74□□□□□ -0.05
CLIP1-215ENST00000541108 ANXA7P20073 488 aaKnown RBP14.74□□□□□ -0.05
CLIP1-215ENST00000541108 NPY4RP50391 375 aa14.74□□□□□ -0.05
CLIP1-215ENST00000541108 UCP3P55916 312 aa14.74□□□□□ -0.05
CLIP1-215ENST00000541108 EDDM3BP56851 147 aa14.74□□□□□ -0.05
CLIP1-215ENST00000541108 FAHD2BQ6P2I3 314 aaPredicted RBP14.74□□□□□ -0.05
CLIP1-215ENST00000541108 OR13A1Q8NGR1 328 aa14.74□□□□□ -0.05
CLIP1-215ENST00000541108 MOB3AQ96BX8 217 aa14.74□□□□□ -0.05
CLIP1-215ENST00000541108 FAHD2AQ96GK7 314 aa14.74□□□□□ -0.05
CLIP1-215ENST00000541108 GPN1Q9HCN4 374 aaPredicted RBP14.74□□□□□ -0.05
CLIP1-215ENST00000541108 A0A0A6YYJ9 748 aa14.73□□□□□ -0.05
CLIP1-215ENST00000541108 A0A1B0GW55 424 aa14.73□□□□□ -0.05
CLIP1-215ENST00000541108 C12orf77C9JDV5 145 aa14.73□□□□□ -0.05
CLIP1-215ENST00000541108 NDUFB3O43676 98 aa14.73□□□□□ -0.05
CLIP1-215ENST00000541108 TUSC2O75896 110 aa14.73□□□□□ -0.05
CLIP1-215ENST00000541108 HEXAP06865 529 aa14.73□□□□□ -0.05
CLIP1-215ENST00000541108 DUX4L2P0CJ85 424 aa14.73□□□□□ -0.05
CLIP1-215ENST00000541108 DUX4L3P0CJ86 424 aa14.73□□□□□ -0.05
CLIP1-215ENST00000541108 DUX4L4P0CJ87 422 aa14.73□□□□□ -0.05
CLIP1-215ENST00000541108 DUX4L5P0CJ88 424 aa14.73□□□□□ -0.05
CLIP1-215ENST00000541108 DUX4L6P0CJ89 424 aa14.73□□□□□ -0.05
CLIP1-215ENST00000541108 DUX4L7P0CJ90 424 aa14.73□□□□□ -0.05
CLIP1-215ENST00000541108 SELLP14151 372 aa14.73□□□□□ -0.05
CLIP1-215ENST00000541108 TMEM155Q4W5P6 130 aa14.73□□□□□ -0.05
CLIP1-215ENST00000541108 LRRC10Q5BKY1 277 aa14.73□□□□□ -0.05
CLIP1-215ENST00000541108 KIAA2026Q5HYC2 2103 aa14.73□□□□□ -0.05
CLIP1-215ENST00000541108 DUX4L9Q6RFH8 374 aaPredicted RBP14.73□□□□□ -0.05
CLIP1-215ENST00000541108 MRGPRDQ8TDS7 321 aa14.73□□□□□ -0.05
CLIP1-215ENST00000541108 C14orf79Q96F83 325 aa14.73□□□□□ -0.05
CLIP1-215ENST00000541108 RAB9BQ9NP90 201 aa14.73□□□□□ -0.05
CLIP1-215ENST00000541108 DUX4Q9UBX2 424 aa14.73□□□□□ -0.05
CLIP1-215ENST00000541108 SNRPGP15A8MWD9 76 aa14.72□□□□□ -0.05
CLIP1-215ENST00000541108 SPINT2O43291 252 aa14.72□□□□□ -0.05
CLIP1-215ENST00000541108 PPYP01298 95 aa14.72□□□□□ -0.05
CLIP1-215ENST00000541108 NFYAP23511 347 aaPredicted RBP14.72□□□□□ -0.05
CLIP1-215ENST00000541108 ZBTB25P24278 435 aa14.72□□□□□ -0.05
CLIP1-215ENST00000541108 TAS2R31P59538 309 aa14.72□□□□□ -0.05
CLIP1-215ENST00000541108 LYPD2Q6UXB3 125 aa14.72□□□□□ -0.05
CLIP1-215ENST00000541108 SLC25A42Q86VD7 318 aa14.72□□□□□ -0.05
CLIP1-215ENST00000541108 ZFAND1Q8TCF1 268 aa14.72□□□□□ -0.05
CLIP1-215ENST00000541108 IL1F10Q8WWZ1 152 aa14.72□□□□□ -0.05
CLIP1-215ENST00000541108 CORO2AQ92828 525 aa14.72□□□□□ -0.05
CLIP1-215ENST00000541108 TMPRSS13Q9BYE2 586 aa14.72□□□□□ -0.05
CLIP1-215ENST00000541108 TOLLIPQ9H0E2 274 aa14.72□□□□□ -0.05
CLIP1-215ENST00000541108 C5orf66Q9H5L9 145 aa14.72□□□□□ -0.05
CLIP1-215ENST00000541108 SLC23A1Q9UHI7 598 aa14.72□□□□□ -0.05
CLIP1-215ENST00000541108 C15orf65H3BRN8 121 aa14.71□□□□□ -0.05
CLIP1-215ENST00000541108 PFDN1O60925 122 aa14.71□□□□□ -0.05
CLIP1-215ENST00000541108 LY6HO94772 140 aa14.71□□□□□ -0.05
CLIP1-215ENST00000541108 HBZP02008 142 aa14.71□□□□□ -0.05
CLIP1-215ENST00000541108 TRAPPC2P0DI81 140 aa14.71□□□□□ -0.05
CLIP1-215ENST00000541108 TRAPPC2BP0DI82 140 aa14.71□□□□□ -0.05
CLIP1-215ENST00000541108 IL2RGP31785 369 aa14.71□□□□□ -0.05
CLIP1-215ENST00000541108 UBE2MP61081 183 aaKnown RBP14.71□□□□□ -0.05
CLIP1-215ENST00000541108 HTD2P86397 168 aa14.71□□□□□ -0.05
CLIP1-215ENST00000541108 MEF2CQ06413 473 aaPredicted RBP14.71□□□□□ -0.05
CLIP1-215ENST00000541108 LPCAT3Q6P1A2 487 aa14.71□□□□□ -0.05
CLIP1-215ENST00000541108 C5orf24Q7Z6I8 188 aa14.71□□□□□ -0.05
CLIP1-215ENST00000541108 TMED4Q7Z7H5 227 aa14.71□□□□□ -0.05
CLIP1-215ENST00000541108 H1FOOQ8IZA3 346 aaPredicted RBP14.71□□□□□ -0.05
CLIP1-215ENST00000541108 PRR18Q8N4B5 295 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms