RNA–Protein interactions for RNA: ENST00000540931.1

CLSTN3-210, Transcript of calsyntenin 3, humanhuman

TSL 2

Gene CLSTN3, Length 910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-210ENST00000540931 PLPPR1Q8TBJ4 325 aa14.4□□□□□ -0.1
CLSTN3-210ENST00000540931 CREB3L1Q96BA8 519 aa14.4□□□□□ -0.1
CLSTN3-210ENST00000540931 ARHGAP5-AS1Q96IT6 56 aa14.4□□□□□ -0.1
CLSTN3-210ENST00000540931 PCGF1Q9BSM1 259 aa14.4□□□□□ -0.1
CLSTN3-210ENST00000540931 FAAP24Q9BTP7 215 aa14.4□□□□□ -0.1
CLSTN3-210ENST00000540931 KCNK15Q9H427 330 aa14.4□□□□□ -0.1
CLSTN3-210ENST00000540931 MBNL3Q9NUK0 354 aaKnown RBP14.4□□□□□ -0.1
CLSTN3-210ENST00000540931 COMMD3Q9UBI1 195 aa14.4□□□□□ -0.1
CLSTN3-210ENST00000540931 WNK2Q9Y3S1 2297 aa14.4□□□□□ -0.1
CLSTN3-210ENST00000540931 ZANQ9Y493 2812 aa14.4□□□□□ -0.1
CLSTN3-210ENST00000540931 A0A0A6YYD4 124 aa14.39□□□□□ -0.11
CLSTN3-210ENST00000540931 A0A0B4J203 849 aa14.39□□□□□ -0.11
CLSTN3-210ENST00000540931 NAPSAO96009 420 aa14.39□□□□□ -0.11
CLSTN3-210ENST00000540931 UBE2E1P51965 193 aa14.39□□□□□ -0.11
CLSTN3-210ENST00000540931 EFNB2P52799 333 aa14.39□□□□□ -0.11
CLSTN3-210ENST00000540931 ARFRP1Q13795 201 aa14.39□□□□□ -0.11
CLSTN3-210ENST00000540931 BAIAP2L2Q6UXY1 529 aa14.39□□□□□ -0.11
CLSTN3-210ENST00000540931 VMO1Q7Z5L0 202 aa14.39□□□□□ -0.11
CLSTN3-210ENST00000540931 FGFRL1Q8N441 504 aa14.39□□□□□ -0.11
CLSTN3-210ENST00000540931 SPATA3Q8NHX4 192 aa14.39□□□□□ -0.11
CLSTN3-210ENST00000540931 SULT4A1Q9BR01 284 aa14.39□□□□□ -0.11
CLSTN3-210ENST00000540931 NUP50Q9UKX7 468 aa14.39□□□□□ -0.11
CLSTN3-210ENST00000540931 SESN1Q9Y6P5 492 aa14.39□□□□□ -0.11
CLSTN3-210ENST00000540931 MFNGO00587 321 aa14.38□□□□□ -0.11
CLSTN3-210ENST00000540931 DIRAS3O95661 229 aa14.38□□□□□ -0.11
CLSTN3-210ENST00000540931 IGHV1-8P0DP01 117 aa14.38□□□□□ -0.11
CLSTN3-210ENST00000540931 SRD5A1P18405 259 aa14.38□□□□□ -0.11
CLSTN3-210ENST00000540931 DTYMKP23919 212 aa14.38□□□□□ -0.11
CLSTN3-210ENST00000540931 KIR2DS4P43632 304 aa14.38□□□□□ -0.11
CLSTN3-210ENST00000540931 CBX5P45973 191 aa14.38□□□□□ -0.11
CLSTN3-210ENST00000540931 ZNF273Q14593 569 aa14.38□□□□□ -0.11
CLSTN3-210ENST00000540931 KIR2DS1Q14954 304 aa14.38□□□□□ -0.11
CLSTN3-210ENST00000540931 CDNFQ49AH0 187 aa14.38□□□□□ -0.11
CLSTN3-210ENST00000540931 HACD4Q5VWC8 232 aa14.38□□□□□ -0.11
CLSTN3-210ENST00000540931 TPRX1Q8N7U7 411 aa14.38□□□□□ -0.11
CLSTN3-210ENST00000540931 OR5H6Q8NGV6 325 aa14.38□□□□□ -0.11
CLSTN3-210ENST00000540931 TNFRSF14Q92956 283 aa14.38□□□□□ -0.11
CLSTN3-210ENST00000540931 MMP27Q9H306 513 aa14.38□□□□□ -0.11
CLSTN3-210ENST00000540931 CALYQ9NYX4 217 aa14.38□□□□□ -0.11
CLSTN3-210ENST00000540931 FBN1P35555 2871 aaKnown RBP14.38□□□□□ -0.11
CLSTN3-210ENST00000540931 NPIPB11E5RHQ5 1161 aa14.37□□□□□ -0.11
CLSTN3-210ENST00000540931 CRLF1O75462 422 aa14.37□□□□□ -0.11
CLSTN3-210ENST00000540931 RGS11O94810 467 aa14.37□□□□□ -0.11
CLSTN3-210ENST00000540931 MELTFP08582 738 aa14.37□□□□□ -0.11
CLSTN3-210ENST00000540931 CGB3P0DN86 165 aa14.37□□□□□ -0.11
CLSTN3-210ENST00000540931 CGB7P0DN87 165 aa14.37□□□□□ -0.11
CLSTN3-210ENST00000540931 DLX6P56179 175 aa14.37□□□□□ -0.11
CLSTN3-210ENST00000540931 GNG2P59768 71 aa14.37□□□□□ -0.11
CLSTN3-210ENST00000540931 MIDNQ504T8 468 aa14.37□□□□□ -0.11
CLSTN3-210ENST00000540931 PLAC9Q5JTB6 97 aa14.37□□□□□ -0.11
CLSTN3-210ENST00000540931 TMEM69Q5SWH9 247 aa14.37□□□□□ -0.11
CLSTN3-210ENST00000540931 STEAP3Q658P3 488 aa14.37□□□□□ -0.11
CLSTN3-210ENST00000540931 BRICD5Q6PL45 260 aa14.37□□□□□ -0.11
CLSTN3-210ENST00000540931 ZNF596Q8TC21 504 aa14.37□□□□□ -0.11
CLSTN3-210ENST00000540931 MRPL30Q8TCC3 161 aaKnown RBP14.37□□□□□ -0.11
CLSTN3-210ENST00000540931 GALMQ96C23 342 aa14.37□□□□□ -0.11
CLSTN3-210ENST00000540931 SLC25A38Q96DW6 304 aa14.37□□□□□ -0.11
CLSTN3-210ENST00000540931 ING3Q9NXR8 418 aa14.37□□□□□ -0.11
CLSTN3-210ENST00000540931 IDI2-AS1Q9NZ38 188 aa14.37□□□□□ -0.11
CLSTN3-210ENST00000540931 AK3Q9UIJ7 227 aa14.37□□□□□ -0.11
CLSTN3-210ENST00000540931 A0A087X0M5 115 aa14.36□□□□□ -0.11
CLSTN3-210ENST00000540931 A0A1B0GX30 115 aa14.36□□□□□ -0.11
CLSTN3-210ENST00000540931 DPPA5A6NC42 116 aa14.36□□□□□ -0.11
CLSTN3-210ENST00000540931 FAM25AB3EWG3 89 aa14.36□□□□□ -0.11
CLSTN3-210ENST00000540931 FAM25CB3EWG5 89 aa14.36□□□□□ -0.11
CLSTN3-210ENST00000540931 FAM25GB3EWG6 89 aa14.36□□□□□ -0.11
CLSTN3-210ENST00000540931 RGS5O15539 181 aa14.36□□□□□ -0.11
CLSTN3-210ENST00000540931 FAM157CP0CG43 387 aa14.36□□□□□ -0.11
CLSTN3-210ENST00000540931 CCL3L1P16619 93 aa14.36□□□□□ -0.11
CLSTN3-210ENST00000540931 CDK2P24941 298 aa14.36□□□□□ -0.11
CLSTN3-210ENST00000540931 S100A5P33763 92 aa14.36□□□□□ -0.11
CLSTN3-210ENST00000540931 PRRX1P54821 245 aa14.36□□□□□ -0.11
CLSTN3-210ENST00000540931 LGALS4P56470 323 aa14.36□□□□□ -0.11
CLSTN3-210ENST00000540931 HTD2P86397 168 aa14.36□□□□□ -0.11
CLSTN3-210ENST00000540931 ZNF880Q6PDB4 577 aa14.36□□□□□ -0.11
CLSTN3-210ENST00000540931 Q6ZS49 121 aa14.36□□□□□ -0.11
CLSTN3-210ENST00000540931 C9orf139Q6ZV77 190 aa14.36□□□□□ -0.11
CLSTN3-210ENST00000540931 Q8N7P7 452 aa14.36□□□□□ -0.11
CLSTN3-210ENST00000540931 OR13A1Q8NGR1 328 aa14.36□□□□□ -0.11
CLSTN3-210ENST00000540931 MRGPRDQ8TDS7 321 aa14.36□□□□□ -0.11
CLSTN3-210ENST00000540931 ARL11Q969Q4 196 aa14.36□□□□□ -0.11
CLSTN3-210ENST00000540931 TBX15Q96SF7 602 aa14.36□□□□□ -0.11
CLSTN3-210ENST00000540931 MS4A7Q9GZW8 240 aaPredicted RBP14.36□□□□□ -0.11
CLSTN3-210ENST00000540931 TMEM133Q9H2Q1 129 aa14.36□□□□□ -0.11
CLSTN3-210ENST00000540931 DSCAML1Q8TD84 2053 aa14.35□□□□□ -0.11
CLSTN3-210ENST00000540931 TRAV18A0A075B6X5 111 aa14.35□□□□□ -0.11
CLSTN3-210ENST00000540931 IGHV1-69DA0A0B4J2H0 117 aa14.35□□□□□ -0.11
CLSTN3-210ENST00000540931 FSHBP01225 129 aa14.35□□□□□ -0.11
CLSTN3-210ENST00000540931 IFNA2P01563 188 aa14.35□□□□□ -0.11
CLSTN3-210ENST00000540931 IGHV1-69P01742 117 aa14.35□□□□□ -0.11
CLSTN3-210ENST00000540931 CTXN2P0C2S0 81 aa14.35□□□□□ -0.11
CLSTN3-210ENST00000540931 GNB3P16520 340 aa14.35□□□□□ -0.11
CLSTN3-210ENST00000540931 CD34P28906 385 aa14.35□□□□□ -0.11
CLSTN3-210ENST00000540931 ZNF260Q3ZCT1 412 aa14.35□□□□□ -0.11
CLSTN3-210ENST00000540931 C11orf42Q8N5U0 333 aa14.35□□□□□ -0.11
CLSTN3-210ENST00000540931 OR11H6Q8NGC7 330 aa14.35□□□□□ -0.11
CLSTN3-210ENST00000540931 OR4K15Q8NH41 348 aa14.35□□□□□ -0.11
CLSTN3-210ENST00000540931 MCFD2Q8NI22 146 aa14.35□□□□□ -0.11
CLSTN3-210ENST00000540931 FAM216AQ8WUB2 273 aa14.35□□□□□ -0.11
CLSTN3-210ENST00000540931 GHITMQ9H3K2 345 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 126.8 ms