RNA–Protein interactions for RNA: ENST00000540709.1

MDM2-227, Transcript of MDM2 proto-oncogene, humanhuman

TSL 3

Gene MDM2, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-227ENST00000540709 OR6N2Q8NGY6 317 aa0.96□□□□□ -2.26
MDM2-227ENST00000540709 SPPL2BQ8TCT7 592 aa0.96□□□□□ -2.26
MDM2-227ENST00000540709 IFT81Q8WYA0 676 aa0.96□□□□□ -2.26
MDM2-227ENST00000540709 TOP1MTQ969P6 601 aa0.96□□□□□ -2.26
MDM2-227ENST00000540709 CIDECQ96AQ7 238 aaPredicted RBP0.96□□□□□ -2.26
MDM2-227ENST00000540709 CLDN23Q96B33 292 aa0.96□□□□□ -2.26
MDM2-227ENST00000540709 TMIGD2Q96BF3 282 aa0.96□□□□□ -2.26
MDM2-227ENST00000540709 CCDC124Q96CT7 223 aaKnown RBP0.96□□□□□ -2.26
MDM2-227ENST00000540709 REEP6Q96HR9 211 aa0.96□□□□□ -2.26
MDM2-227ENST00000540709 ADTRPQ96IZ2 230 aa0.96□□□□□ -2.26
MDM2-227ENST00000540709 CATSPER2Q96P56 530 aa0.96□□□□□ -2.26
MDM2-227ENST00000540709 PITX2Q99697 317 aa0.96□□□□□ -2.26
MDM2-227ENST00000540709 RAB1BQ9H0U4 201 aa0.96□□□□□ -2.26
MDM2-227ENST00000540709 POMKQ9H5K3 350 aa0.96□□□□□ -2.26
MDM2-227ENST00000540709 LINC00588Q9Y4M8 146 aa0.96□□□□□ -2.26
MDM2-227ENST00000540709 ADAMTS7Q9UKP4 1686 aa0.95□□□□□ -2.26
MDM2-227ENST00000540709 IGHV2-26A0A0B4J1V2 119 aa0.95□□□□□ -2.26
MDM2-227ENST00000540709 A8MWP6 167 aa0.95□□□□□ -2.26
MDM2-227ENST00000540709 FNDC10F2Z333 226 aa0.95□□□□□ -2.26
MDM2-227ENST00000540709 H3BP45 60 aa0.95□□□□□ -2.26
MDM2-227ENST00000540709 TRAPPC3O43617 180 aa0.95□□□□□ -2.26
MDM2-227ENST00000540709 GMDSO60547 372 aa0.95□□□□□ -2.26
MDM2-227ENST00000540709 TPM3P06753 285 aa0.95□□□□□ -2.26
MDM2-227ENST00000540709 BGNP21810 368 aa0.95□□□□□ -2.26
MDM2-227ENST00000540709 MAGEA3P43357 314 aa0.95□□□□□ -2.26
MDM2-227ENST00000540709 RAB38P57729 211 aa0.95□□□□□ -2.26
MDM2-227ENST00000540709 VSNL1P62760 191 aa0.95□□□□□ -2.26
MDM2-227ENST00000540709 APOFQ13790 326 aa0.95□□□□□ -2.26
MDM2-227ENST00000540709 VAMP3Q15836 100 aa0.95□□□□□ -2.26
MDM2-227ENST00000540709 USF2Q15853 346 aaPredicted RBP0.95□□□□□ -2.26
MDM2-227ENST00000540709 N4BP2L1Q5TBK1 243 aaPredicted RBP0.95□□□□□ -2.26
MDM2-227ENST00000540709 CCDC121Q6ZUS5 278 aa0.95□□□□□ -2.26
MDM2-227ENST00000540709 MARCH3Q86UD3 253 aa0.95□□□□□ -2.26
MDM2-227ENST00000540709 SYS1Q8N2H4 156 aa0.95□□□□□ -2.26
MDM2-227ENST00000540709 KRTCAP2Q8N6L1 136 aa0.95□□□□□ -2.26
MDM2-227ENST00000540709 OR8G5Q8NG78 346 aa0.95□□□□□ -2.26
MDM2-227ENST00000540709 OR11G2Q8NGC1 345 aa0.95□□□□□ -2.26
MDM2-227ENST00000540709 CLHC1Q8NHS4 586 aa0.95□□□□□ -2.26
MDM2-227ENST00000540709 CCDC12Q8WUD4 166 aaPredicted RBP0.95□□□□□ -2.26
MDM2-227ENST00000540709 PDCD6IPQ8WUM4 868 aaKnown RBP0.95□□□□□ -2.26
MDM2-227ENST00000540709 KCTD4Q8WVF5 259 aa0.95□□□□□ -2.26
MDM2-227ENST00000540709 CAPZA3Q96KX2 299 aa0.95□□□□□ -2.26
MDM2-227ENST00000540709 CYTH2Q99418 400 aa0.95□□□□□ -2.26
MDM2-227ENST00000540709 CIB1Q99828 191 aa0.95□□□□□ -2.26
MDM2-227ENST00000540709 MED10Q9BTT4 135 aa0.95□□□□□ -2.26
MDM2-227ENST00000540709 GOLPH3Q9H4A6 298 aa0.95□□□□□ -2.26
MDM2-227ENST00000540709 FAM206AQ9NX38 181 aa0.95□□□□□ -2.26
MDM2-227ENST00000540709 STMN3Q9NZ72 180 aa0.95□□□□□ -2.26
MDM2-227ENST00000540709 SLIT2O94813 1529 aa0.94□□□□□ -2.26
MDM2-227ENST00000540709 IGHV3OR15-7A0A075B7D8 119 aa0.94□□□□□ -2.26
MDM2-227ENST00000540709 LOC102725191A0A1B0GVB3 256 aa0.94□□□□□ -2.26
MDM2-227ENST00000540709 A0A1B0GXF2 115 aa0.94□□□□□ -2.26
MDM2-227ENST00000540709 GOLGA8IPA6NC78 632 aa0.94□□□□□ -2.26
MDM2-227ENST00000540709 TRPC5OSA6NMA1 111 aa0.94□□□□□ -2.26
MDM2-227ENST00000540709 I3L4J1 428 aa0.94□□□□□ -2.26
MDM2-227ENST00000540709 hCG_2039718K7EN88 272 aa0.94□□□□□ -2.26
MDM2-227ENST00000540709 SULT1C2O00338 296 aa0.94□□□□□ -2.26
MDM2-227ENST00000540709 CETN3O15182 167 aa0.94□□□□□ -2.26
MDM2-227ENST00000540709 DENRO43583 198 aaKnown RBP0.94□□□□□ -2.26
MDM2-227ENST00000540709 TNFAIP8O95379 198 aa0.94□□□□□ -2.26
MDM2-227ENST00000540709 SNAP29O95721 258 aa0.94□□□□□ -2.26
MDM2-227ENST00000540709 LDOC1O95751 146 aaPredicted RBP0.94□□□□□ -2.26
MDM2-227ENST00000540709 CA2P00918 260 aa0.94□□□□□ -2.26
MDM2-227ENST00000540709 CD8AP01732 235 aa0.94□□□□□ -2.26
MDM2-227ENST00000540709 ANGP03950 147 aaKnown RBP0.94□□□□□ -2.26
MDM2-227ENST00000540709 NQO2P16083 231 aa0.94□□□□□ -2.26
MDM2-227ENST00000540709 M6PRP20645 277 aa0.94□□□□□ -2.26
MDM2-227ENST00000540709 GTF2H1P32780 548 aa0.94□□□□□ -2.26
MDM2-227ENST00000540709 SPAM1P38567 509 aa0.94□□□□□ -2.26
MDM2-227ENST00000540709 GABRA4P48169 554 aa0.94□□□□□ -2.26
MDM2-227ENST00000540709 GCLMP48507 274 aa0.94□□□□□ -2.26
MDM2-227ENST00000540709 CD151P48509 253 aa0.94□□□□□ -2.26
MDM2-227ENST00000540709 DNASE1L1P49184 302 aa0.94□□□□□ -2.26
MDM2-227ENST00000540709 TPM4P67936 248 aa0.94□□□□□ -2.26
MDM2-227ENST00000540709 STX3Q13277 289 aa0.94□□□□□ -2.26
MDM2-227ENST00000540709 XRCC4Q13426 336 aa0.94□□□□□ -2.26
MDM2-227ENST00000540709 SYCP1Q15431 976 aa0.94□□□□□ -2.26
MDM2-227ENST00000540709 PDPK2PQ6A1A2 396 aa0.94□□□□□ -2.26
MDM2-227ENST00000540709 ELP2Q6IA86 826 aa0.94□□□□□ -2.26
MDM2-227ENST00000540709 FAHD1Q6P587 224 aa0.94□□□□□ -2.26
MDM2-227ENST00000540709 Q6ZRU5 148 aa0.94□□□□□ -2.26
MDM2-227ENST00000540709 AHSA2Q719I0 299 aa0.94□□□□□ -2.26
MDM2-227ENST00000540709 OLIG3Q7RTU3 272 aa0.94□□□□□ -2.26
MDM2-227ENST00000540709 ATP6V1C2Q8NEY4 427 aa0.94□□□□□ -2.26
MDM2-227ENST00000540709 LGALS14Q8TCE9 139 aa0.94□□□□□ -2.26
MDM2-227ENST00000540709 DCANP1Q8TF63 244 aa0.94□□□□□ -2.26
MDM2-227ENST00000540709 TMEM239Q8WW34 195 aa0.94□□□□□ -2.26
MDM2-227ENST00000540709 TSSK6Q9BXA6 273 aa0.94□□□□□ -2.26
MDM2-227ENST00000540709 BBS2Q9BXC9 721 aa0.94□□□□□ -2.26
MDM2-227ENST00000540709 CHRNA10Q9GZZ6 450 aa0.94□□□□□ -2.26
MDM2-227ENST00000540709 SYT4Q9H2B2 425 aa0.94□□□□□ -2.26
MDM2-227ENST00000540709 SPACA1Q9HBV2 294 aa0.94□□□□□ -2.26
MDM2-227ENST00000540709 TMBIM4Q9HC24 238 aa0.94□□□□□ -2.26
MDM2-227ENST00000540709 IFT46Q9NQC8 304 aa0.94□□□□□ -2.26
MDM2-227ENST00000540709 CD300AQ9UGN4 299 aa0.94□□□□□ -2.26
MDM2-227ENST00000540709 ENPP5Q9UJA9 477 aa0.94□□□□□ -2.26
MDM2-227ENST00000540709 NXT1Q9UKK6 140 aaKnown RBP0.94□□□□□ -2.26
MDM2-227ENST00000540709 POMPQ9Y244 141 aa0.94□□□□□ -2.26
MDM2-227ENST00000540709 BTRCQ9Y297 605 aa0.94□□□□□ -2.26
MDM2-227ENST00000540709 COL4A2P08572 1712 aa0.93□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms