RNA–Protein interactions for RNA: ENST00000540537.5

CHFR-217, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 913 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-217ENST00000540537 CDH26Q8IXH8 852 aa16.72■□□□□ 0.27
CHFR-217ENST00000540537 STX19Q8N4C7 294 aa16.72■□□□□ 0.27
CHFR-217ENST00000540537 JAGN1Q8N5M9 183 aa16.72■□□□□ 0.27
CHFR-217ENST00000540537 OR5AU1Q8NGC0 362 aa16.72■□□□□ 0.27
CHFR-217ENST00000540537 R3HDM4Q96D70 268 aa16.72■□□□□ 0.27
CHFR-217ENST00000540537 MRPS24Q96EL2 167 aaKnown RBP16.72■□□□□ 0.27
CHFR-217ENST00000540537 TRAV39A0A0B4J263 110 aa16.71■□□□□ 0.27
CHFR-217ENST00000540537 PNMA8CA0A1B0GUJ8 204 aa16.71■□□□□ 0.27
CHFR-217ENST00000540537 A0A1W2PP11 408 aa16.71■□□□□ 0.27
CHFR-217ENST00000540537 A0A1W2PPI3 338 aa16.71■□□□□ 0.27
CHFR-217ENST00000540537 LPLP06858 475 aa16.71■□□□□ 0.27
CHFR-217ENST00000540537 GNG10P50151 68 aa16.71■□□□□ 0.27
CHFR-217ENST00000540537 RAB7AP51149 207 aa16.71■□□□□ 0.27
CHFR-217ENST00000540537 CD83Q01151 205 aa16.71■□□□□ 0.27
CHFR-217ENST00000540537 BEAN1Q3B7T3 259 aa16.71■□□□□ 0.27
CHFR-217ENST00000540537 KPRPQ5T749 579 aaPredicted RBP16.71■□□□□ 0.27
CHFR-217ENST00000540537 OR8H3Q8N146 312 aa16.71■□□□□ 0.27
CHFR-217ENST00000540537 BPIFB6Q8NFQ5 453 aa16.71■□□□□ 0.27
CHFR-217ENST00000540537 THRSPQ92748 146 aa16.71■□□□□ 0.27
CHFR-217ENST00000540537 MUL1Q969V5 352 aa16.71■□□□□ 0.27
CHFR-217ENST00000540537 DERL3Q96Q80 235 aa16.71■□□□□ 0.27
CHFR-217ENST00000540537 VCXQ9H320 206 aa16.71■□□□□ 0.27
CHFR-217ENST00000540537 SPACA1Q9HBV2 294 aa16.71■□□□□ 0.27
CHFR-217ENST00000540537 FKBP14Q9NWM8 211 aa16.71■□□□□ 0.27
CHFR-217ENST00000540537 MRPS28Q9Y2Q9 187 aaKnown RBP16.71■□□□□ 0.27
CHFR-217ENST00000540537 MOB4Q9Y3A3 225 aa16.71■□□□□ 0.27
CHFR-217ENST00000540537 A0A1W2PPK0 400 aa16.7■□□□□ 0.26
CHFR-217ENST00000540537 C15orf65H3BRN8 121 aa16.7■□□□□ 0.26
CHFR-217ENST00000540537 ORC5O43913 435 aa16.7■□□□□ 0.26
CHFR-217ENST00000540537 SNRNP70P08621 437 aaKnown RBP16.7■□□□□ 0.26
CHFR-217ENST00000540537 CELP19835 753 aa16.7■□□□□ 0.26
CHFR-217ENST00000540537 DOC2BQ14184 412 aa16.7■□□□□ 0.26
CHFR-217ENST00000540537 GLIPR1L1Q6UWM5 242 aa16.7■□□□□ 0.26
CHFR-217ENST00000540537 ZNF497Q6ZNH5 498 aa16.7■□□□□ 0.26
CHFR-217ENST00000540537 CENPVQ7Z7K6 275 aaPredicted RBP16.7■□□□□ 0.26
CHFR-217ENST00000540537 OR52M1Q8NGK5 317 aa16.7■□□□□ 0.26
CHFR-217ENST00000540537 OR10X1Q8NGY0 326 aa16.7■□□□□ 0.26
CHFR-217ENST00000540537 OR56B4Q8NH76 319 aa16.7■□□□□ 0.26
CHFR-217ENST00000540537 NEK7Q8TDX7 302 aa16.7■□□□□ 0.26
CHFR-217ENST00000540537 RCC2Q9P258 522 aaKnown RBP16.7■□□□□ 0.26
CHFR-217ENST00000540537 MAPK3P27361 379 aaPredicted RBP16.69■□□□□ 0.26
CHFR-217ENST00000540537 DRAM1Q8N682 238 aa16.69■□□□□ 0.26
CHFR-217ENST00000540537 NANOGP1Q8N7R0 232 aa16.69■□□□□ 0.26
CHFR-217ENST00000540537 TFAP2CQ92754 450 aa16.69■□□□□ 0.26
CHFR-217ENST00000540537 ARL11Q969Q4 196 aa16.69■□□□□ 0.26
CHFR-217ENST00000540537 ERGIC3Q9Y282 383 aa16.69■□□□□ 0.26
CHFR-217ENST00000540537 DNAH3Q8TD57 4116 aa16.69■□□□□ 0.26
CHFR-217ENST00000540537 AIPO00170 330 aa16.68■□□□□ 0.26
CHFR-217ENST00000540537 PIN1P1O15428 100 aa16.68■□□□□ 0.26
CHFR-217ENST00000540537 MT-ND4P03905 459 aa16.68■□□□□ 0.26
CHFR-217ENST00000540537 MAS1P04201 325 aa16.68■□□□□ 0.26
CHFR-217ENST00000540537 DIAPH2-AS1Q14236 149 aa16.68■□□□□ 0.26
CHFR-217ENST00000540537 AWAT2Q6E213 333 aa16.68■□□□□ 0.26
CHFR-217ENST00000540537 LYPD6Q86Y78 171 aa16.68■□□□□ 0.26
CHFR-217ENST00000540537 LINC00311Q8N616 119 aa16.68■□□□□ 0.26
CHFR-217ENST00000540537 NKAIN3Q8N8D7 197 aa16.68■□□□□ 0.26
CHFR-217ENST00000540537 C8orf31Q8N9H6 132 aa16.68■□□□□ 0.26
CHFR-217ENST00000540537 FAM90A10PA6NDY2 464 aa16.67■□□□□ 0.26
CHFR-217ENST00000540537 FAM90A7PA6NKC0 464 aa16.67■□□□□ 0.26
CHFR-217ENST00000540537 SH2D7A6NKC9 451 aaPredicted RBP16.67■□□□□ 0.26
CHFR-217ENST00000540537 FAM90A23PA8MXZ1 464 aa16.67■□□□□ 0.26
CHFR-217ENST00000540537 MCRIP1C9JLW8 97 aa16.67■□□□□ 0.26
CHFR-217ENST00000540537 HSD17B6O14756 317 aa16.67■□□□□ 0.26
CHFR-217ENST00000540537 ZNF816Q0VGE8 651 aaPredicted RBP16.67■□□□□ 0.26
CHFR-217ENST00000540537 Q3ZCU0 254 aa16.67■□□□□ 0.26
CHFR-217ENST00000540537 RNLSQ5VYX0 342 aa16.67■□□□□ 0.26
CHFR-217ENST00000540537 CCDC107Q8WV48 283 aa16.67■□□□□ 0.26
CHFR-217ENST00000540537 UQCC2Q9BRT2 126 aa16.67■□□□□ 0.26
CHFR-217ENST00000540537 RAB9BQ9NP90 201 aa16.67■□□□□ 0.26
CHFR-217ENST00000540537 GFOD1Q9NXC2 390 aa16.67■□□□□ 0.26
CHFR-217ENST00000540537 TSSC4Q9Y5U2 329 aaPredicted RBP16.67■□□□□ 0.26
CHFR-217ENST00000540537 A0A1W2PPE3 182 aa16.66■□□□□ 0.26
CHFR-217ENST00000540537 TCRBV4S1A1TA0A5B7 111 aa16.66■□□□□ 0.26
CHFR-217ENST00000540537 SDCBPO00560 298 aaPredicted RBP16.66■□□□□ 0.26
CHFR-217ENST00000540537 FGF16O43320 207 aa16.66■□□□□ 0.26
CHFR-217ENST00000540537 TMEM11P17152 192 aa16.66■□□□□ 0.26
CHFR-217ENST00000540537 LOXL3P58215 753 aa16.66■□□□□ 0.26
CHFR-217ENST00000540537 HES1Q14469 280 aa16.66■□□□□ 0.26
CHFR-217ENST00000540537 TCTEX1D4Q5JR98 221 aa16.66■□□□□ 0.26
CHFR-217ENST00000540537 C9orf152Q5JTZ5 239 aa16.66■□□□□ 0.26
CHFR-217ENST00000540537 RAB12Q6IQ22 244 aa16.66■□□□□ 0.26
CHFR-217ENST00000540537 GAPTQ8N292 157 aa16.66■□□□□ 0.26
CHFR-217ENST00000540537 OR4X2Q8NGF9 303 aa16.66■□□□□ 0.26
CHFR-217ENST00000540537 DCLRE1BQ9H816 532 aa16.66■□□□□ 0.26
CHFR-217ENST00000540537 ETAA1Q9NY74 926 aa16.66■□□□□ 0.26
CHFR-217ENST00000540537 A0A1W2PRX2 142 aa16.65■□□□□ 0.26
CHFR-217ENST00000540537 CCRL2O00421 344 aa16.65■□□□□ 0.26
CHFR-217ENST00000540537 GAPDHP04406 335 aaKnown RBP16.65■□□□□ 0.26
CHFR-217ENST00000540537 CDK1P06493 297 aa16.65■□□□□ 0.26
CHFR-217ENST00000540537 MGMTP16455 207 aa16.65■□□□□ 0.26
CHFR-217ENST00000540537 TMEM30BQ3MIR4 351 aa16.65■□□□□ 0.26
CHFR-217ENST00000540537 C5orf56Q8N8D9 126 aa16.65■□□□□ 0.26
CHFR-217ENST00000540537 MYDGFQ969H8 173 aa16.65■□□□□ 0.26
CHFR-217ENST00000540537 Q96M66 194 aa16.65■□□□□ 0.26
CHFR-217ENST00000540537 MND1Q9BWT6 205 aa16.65■□□□□ 0.26
CHFR-217ENST00000540537 SELENOIQ9C0D9 397 aa16.65■□□□□ 0.26
CHFR-217ENST00000540537 BANF2Q9H503 90 aa16.65■□□□□ 0.26
CHFR-217ENST00000540537 GHRLQ9UBU3 117 aa16.65■□□□□ 0.26
CHFR-217ENST00000540537 IGHV1-3A0A0C4DH29 117 aa16.64■□□□□ 0.25
CHFR-217ENST00000540537 ANKRD65E5RJM6 399 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms