RNA–Protein interactions for RNA: ENST00000540010.1

TRAF1-202, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 4,303 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-202ENST00000540010 PINX1Q96BK5 328 aaKnown RBP8.68□□□□□ -1.02
TRAF1-202ENST00000540010 CTDSP1Q9GZU7 261 aa8.68□□□□□ -1.02
TRAF1-202ENST00000540010 ZNF331Q9NQX6 463 aaPredicted RBP8.68□□□□□ -1.02
TRAF1-202ENST00000540010 AURKAIP1Q9NWT8 199 aaPredicted RBP8.68□□□□□ -1.02
TRAF1-202ENST00000540010 F6UZH7 168 aa8.68□□□□□ -1.02
TRAF1-202ENST00000540010 CALCRP30988 508 aa8.68□□□□□ -1.02
TRAF1-202ENST00000540010 KRTDAPP60985 99 aa8.68□□□□□ -1.02
TRAF1-202ENST00000540010 DLK1P80370 383 aa8.68□□□□□ -1.02
TRAF1-202ENST00000540010 RSPO4Q2I0M5 234 aaPredicted RBP8.68□□□□□ -1.02
TRAF1-202ENST00000540010 ACOT6Q3I5F7 207 aaPredicted RBP8.68□□□□□ -1.02
TRAF1-202ENST00000540010 PLA2G2CQ5R387 149 aa8.68□□□□□ -1.02
TRAF1-202ENST00000540010 SPINK14Q6IE38 97 aa8.68□□□□□ -1.02
TRAF1-202ENST00000540010 BTNL8Q6UX41 500 aa8.68□□□□□ -1.02
TRAF1-202ENST00000540010 GALMQ96C23 342 aa8.68□□□□□ -1.02
TRAF1-202ENST00000540010 CREBBPQ92793 2442 aa8.68□□□□□ -1.02
TRAF1-202ENST00000540010 KIAA2026Q5HYC2 2103 aa8.68□□□□□ -1.02
TRAF1-202ENST00000540010 MFNGO00587 321 aa8.68□□□□□ -1.02
TRAF1-202ENST00000540010 APOA2P02652 100 aa8.68□□□□□ -1.02
TRAF1-202ENST00000540010 MMP7P09237 267 aaPredicted RBP8.68□□□□□ -1.02
TRAF1-202ENST00000540010 ATP6V0CP27449 155 aa8.68□□□□□ -1.02
TRAF1-202ENST00000540010 GNG3P63215 75 aa8.68□□□□□ -1.02
TRAF1-202ENST00000540010 MZT1Q08AG7 82 aa8.68□□□□□ -1.02
TRAF1-202ENST00000540010 TMEM241Q24JQ0 296 aa8.68□□□□□ -1.02
TRAF1-202ENST00000540010 ALKBH6Q3KRA9 238 aa8.68□□□□□ -1.02
TRAF1-202ENST00000540010 TIGITQ495A1 244 aa8.68□□□□□ -1.02
TRAF1-202ENST00000540010 SOSTQ9BQB4 213 aa8.68□□□□□ -1.02
TRAF1-202ENST00000540010 GPR87Q9BY21 358 aa8.68□□□□□ -1.02
TRAF1-202ENST00000540010 IGHV3-43A0A0B4J1X8 118 aa8.68□□□□□ -1.02
TRAF1-202ENST00000540010 H3BQ15 152 aa8.68□□□□□ -1.02
TRAF1-202ENST00000540010 FGF2P09038 288 aa8.68□□□□□ -1.02
TRAF1-202ENST00000540010 IGHV3-43DP0DP04 118 aa8.68□□□□□ -1.02
TRAF1-202ENST00000540010 ARR3P36575 388 aa8.68□□□□□ -1.02
TRAF1-202ENST00000540010 RAC1P63000 192 aa8.68□□□□□ -1.02
TRAF1-202ENST00000540010 TGIF1Q15583 401 aa8.68□□□□□ -1.02
TRAF1-202ENST00000540010 SCCPDHQ8NBX0 429 aa8.68□□□□□ -1.02
TRAF1-202ENST00000540010 DEFB124Q8NES8 71 aa8.68□□□□□ -1.02
TRAF1-202ENST00000540010 FER1L6-AS2Q96M78 137 aa8.68□□□□□ -1.02
TRAF1-202ENST00000540010 PIPOXQ9P0Z9 390 aa8.68□□□□□ -1.02
TRAF1-202ENST00000540010 HSF4Q9ULV5 492 aa8.68□□□□□ -1.02
TRAF1-202ENST00000540010 GPR132Q9UNW8 380 aa8.68□□□□□ -1.02
TRAF1-202ENST00000540010 ADAMTS20P59510 1910 aa8.67□□□□□ -1.02
TRAF1-202ENST00000540010 LOC105371267A0A1B0GV96 52 aa8.67□□□□□ -1.02
TRAF1-202ENST00000540010 TERTO14746 1132 aaKnown RBP8.67□□□□□ -1.02
TRAF1-202ENST00000540010 TRAF3IP2O43734 574 aaPredicted RBP8.67□□□□□ -1.02
TRAF1-202ENST00000540010 ZNF737O75373 536 aa8.67□□□□□ -1.02
TRAF1-202ENST00000540010 NGFP01138 241 aa8.67□□□□□ -1.02
TRAF1-202ENST00000540010 ZNF17P17021 662 aa8.67□□□□□ -1.02
TRAF1-202ENST00000540010 KLK2P20151 261 aa8.67□□□□□ -1.02
TRAF1-202ENST00000540010 SRD5A2P31213 254 aa8.67□□□□□ -1.02
TRAF1-202ENST00000540010 FHITP49789 147 aa8.67□□□□□ -1.02
TRAF1-202ENST00000540010 EWSR1Q01844 656 aaKnown RBP eCLIP8.67□□□□□ -1.02
TRAF1-202ENST00000540010 SLC38A11Q08AI6 406 aa8.67□□□□□ -1.02
TRAF1-202ENST00000540010 PMS2P11Q13670 270 aa8.67□□□□□ -1.02
TRAF1-202ENST00000540010 SURF2Q15527 256 aaPredicted RBP8.67□□□□□ -1.02
TRAF1-202ENST00000540010 FFAR4Q5NUL3 377 aa8.67□□□□□ -1.02
TRAF1-202ENST00000540010 OR13G1Q8NGZ3 307 aa8.67□□□□□ -1.02
TRAF1-202ENST00000540010 POM121Q96HA1 1249 aa8.67□□□□□ -1.02
TRAF1-202ENST00000540010 DYNLRB1Q9NP97 96 aa8.67□□□□□ -1.02
TRAF1-202ENST00000540010 SLC7A10Q9NS82 523 aa8.67□□□□□ -1.02
TRAF1-202ENST00000540010 PKDREJQ9NTG1 2253 aa8.67□□□□□ -1.02
TRAF1-202ENST00000540010 A0A0G2JMM0 328 aa8.67□□□□□ -1.02
TRAF1-202ENST00000540010 A0A1W2PPB8 328 aa8.67□□□□□ -1.02
TRAF1-202ENST00000540010 A0A1W2PRS3 328 aa8.67□□□□□ -1.02
TRAF1-202ENST00000540010 XKRY2A2RUG3 117 aa8.67□□□□□ -1.02
TRAF1-202ENST00000540010 NPIPB13A6NJU9 1138 aa8.67□□□□□ -1.02
TRAF1-202ENST00000540010 KIR3DP1A8MWS1 328 aa8.67□□□□□ -1.02
TRAF1-202ENST00000540010 C21orf140B9A014 251 aa8.67□□□□□ -1.02
TRAF1-202ENST00000540010 NPIPB4C9JG80 1138 aa8.67□□□□□ -1.02
TRAF1-202ENST00000540010 OR5G3P0C626 314 aa8.67□□□□□ -1.02
TRAF1-202ENST00000540010 VDAC1P21796 283 aa8.67□□□□□ -1.02
TRAF1-202ENST00000540010 LPAR6P43657 344 aa8.67□□□□□ -1.02
TRAF1-202ENST00000540010 P2RY4P51582 365 aa8.67□□□□□ -1.02
TRAF1-202ENST00000540010 ROM1Q03395 351 aa8.67□□□□□ -1.02
TRAF1-202ENST00000540010 KCNE4Q8WWG9 221 aa8.67□□□□□ -1.02
TRAF1-202ENST00000540010 ZNF107Q9UII5 783 aaPredicted RBP8.67□□□□□ -1.02
TRAF1-202ENST00000540010 TRBV5-7A0A0A0MS05 114 aa8.67□□□□□ -1.02
TRAF1-202ENST00000540010 GALR2O43603 387 aaPredicted RBP8.67□□□□□ -1.02
TRAF1-202ENST00000540010 OR10J4P0C629 311 aa8.67□□□□□ -1.02
TRAF1-202ENST00000540010 TMEM11P17152 192 aa8.67□□□□□ -1.02
TRAF1-202ENST00000540010 Q0VFX4 171 aa8.67□□□□□ -1.02
TRAF1-202ENST00000540010 ANKRD55Q3KP44 614 aa8.67□□□□□ -1.02
TRAF1-202ENST00000540010 TOMM20LQ6UXN7 152 aa8.67□□□□□ -1.02
TRAF1-202ENST00000540010 LRP11Q86VZ4 500 aa8.67□□□□□ -1.02
TRAF1-202ENST00000540010 TMEM178AQ8NBL3 297 aa8.67□□□□□ -1.02
TRAF1-202ENST00000540010 RNF138Q8WVD3 245 aa8.67□□□□□ -1.02
TRAF1-202ENST00000540010 A0A0J9YW62 118 aa8.66□□□□□ -1.02
TRAF1-202ENST00000540010 ZIC3O60481 467 aa8.66□□□□□ -1.02
TRAF1-202ENST00000540010 MBP02144 154 aa8.66□□□□□ -1.02
TRAF1-202ENST00000540010 PGA4P0DJD7 388 aa8.66□□□□□ -1.02
TRAF1-202ENST00000540010 GALR1P47211 349 aa8.66□□□□□ -1.02
TRAF1-202ENST00000540010 HOGA1Q86XE5 327 aa8.66□□□□□ -1.02
TRAF1-202ENST00000540010 LINC00518Q8N0U6 118 aa8.66□□□□□ -1.02
TRAF1-202ENST00000540010 SIGLECL1Q8N7X8 197 aa8.66□□□□□ -1.02
TRAF1-202ENST00000540010 OR1K1Q8NGR3 316 aa8.66□□□□□ -1.02
TRAF1-202ENST00000540010 RAB40CQ96S21 281 aa8.66□□□□□ -1.02
TRAF1-202ENST00000540010 CLCF1Q9UBD9 225 aa8.66□□□□□ -1.02
TRAF1-202ENST00000540010 FZR1Q9UM11 496 aa8.66□□□□□ -1.02
TRAF1-202ENST00000540010 PHF3Q92576 2039 aaKnown RBP8.66□□□□□ -1.02
TRAF1-202ENST00000540010 PCNX1Q96RV3 2341 aa8.66□□□□□ -1.02
TRAF1-202ENST00000540010 FRYLO94915 3013 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms