RNA–Protein interactions for RNA: ENST00000539941.6

COPS3-212, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2 BASIC

Gene COPS3, Length 1,699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-212ENST00000539941 ZFP57Q9NU63 452 aa14.28□□□□□ -0.12
COPS3-212ENST00000539941 POM121CA8CG34 1229 aa14.27□□□□□ -0.12
COPS3-212ENST00000539941 ST8SIA5O15466 376 aa14.27□□□□□ -0.12
COPS3-212ENST00000539941 CSN2P05814 226 aa14.27□□□□□ -0.12
COPS3-212ENST00000539941 PDCD1Q15116 288 aa14.27□□□□□ -0.12
COPS3-212ENST00000539941 WDR82Q6UXN9 313 aa14.27□□□□□ -0.12
COPS3-212ENST00000539941 Q6ZS49 121 aa14.27□□□□□ -0.12
COPS3-212ENST00000539941 ZDHHC22Q8N966 263 aa14.27□□□□□ -0.12
COPS3-212ENST00000539941 BPIFCQ8NFQ6 507 aa14.27□□□□□ -0.12
COPS3-212ENST00000539941 CCDC107Q8WV48 283 aa14.27□□□□□ -0.12
COPS3-212ENST00000539941 ANXA10Q9UJ72 324 aa14.27□□□□□ -0.12
COPS3-212ENST00000539941 ZDHHC8Q9ULC8 765 aa14.27□□□□□ -0.12
COPS3-212ENST00000539941 DEGS1O15121 323 aa14.26□□□□□ -0.13
COPS3-212ENST00000539941 RLN1P04808 185 aa14.26□□□□□ -0.13
COPS3-212ENST00000539941 PAX6P26367 422 aa14.26□□□□□ -0.13
COPS3-212ENST00000539941 CFHR2P36980 270 aa14.26□□□□□ -0.13
COPS3-212ENST00000539941 PRAMEF6Q5VXH4 476 aa14.26□□□□□ -0.13
COPS3-212ENST00000539941 Q6P435 159 aa14.26□□□□□ -0.13
COPS3-212ENST00000539941 SUMF2Q8NBJ7 301 aa14.26□□□□□ -0.13
COPS3-212ENST00000539941 ZNF286AQ9HBT8 521 aa14.26□□□□□ -0.13
COPS3-212ENST00000539941 ATP23Q9Y6H3 246 aa14.26□□□□□ -0.13
COPS3-212ENST00000539941 NKX2-6A6NCS4 301 aa14.26□□□□□ -0.13
COPS3-212ENST00000539941 SH2D1BO14796 132 aa14.26□□□□□ -0.13
COPS3-212ENST00000539941 NAPSAO96009 420 aa14.26□□□□□ -0.13
COPS3-212ENST00000539941 ANXA7P20073 488 aaKnown RBP14.26□□□□□ -0.13
COPS3-212ENST00000539941 MDH2P40926 338 aaKnown RBP14.26□□□□□ -0.13
COPS3-212ENST00000539941 GATA4P43694 442 aa14.26□□□□□ -0.13
COPS3-212ENST00000539941 C4orf17Q53FE4 359 aa14.26□□□□□ -0.13
COPS3-212ENST00000539941 BRICD5Q6PL45 260 aa14.26□□□□□ -0.13
COPS3-212ENST00000539941 SLC36A1Q7Z2H8 476 aa14.26□□□□□ -0.13
COPS3-212ENST00000539941 TERB2Q8NHR7 220 aa14.26□□□□□ -0.13
COPS3-212ENST00000539941 NANPQ8TBE9 248 aa14.26□□□□□ -0.13
COPS3-212ENST00000539941 MEGF10Q96KG7 1140 aa14.26□□□□□ -0.13
COPS3-212ENST00000539941 SCGB3A2Q96PL1 93 aa14.26□□□□□ -0.13
COPS3-212ENST00000539941 DIRC2Q96SL1 478 aa14.26□□□□□ -0.13
COPS3-212ENST00000539941 TREM2Q9NZC2 230 aa14.26□□□□□ -0.13
COPS3-212ENST00000539941 EHFQ9NZC4 300 aa14.26□□□□□ -0.13
COPS3-212ENST00000539941 ZNF69Q9UC07 566 aa14.26□□□□□ -0.13
COPS3-212ENST00000539941 CARHSP1Q9Y2V2 147 aaKnown RBP14.26□□□□□ -0.13
COPS3-212ENST00000539941 TRBV6-6A0A0A6YYG2 114 aa14.25□□□□□ -0.13
COPS3-212ENST00000539941 TRAV24A0A0B4J272 114 aa14.25□□□□□ -0.13
COPS3-212ENST00000539941 CEACAM18A8MTB9 384 aa14.25□□□□□ -0.13
COPS3-212ENST00000539941 ARPC5O15511 151 aa14.25□□□□□ -0.13
COPS3-212ENST00000539941 EIF3GO75821 320 aaKnown RBP eCLIP14.25□□□□□ -0.13
COPS3-212ENST00000539941 BTF3P20290 206 aaKnown RBP14.25□□□□□ -0.13
COPS3-212ENST00000539941 TNFSF4P23510 183 aa14.25□□□□□ -0.13
COPS3-212ENST00000539941 DUSP1P28562 367 aa14.25□□□□□ -0.13
COPS3-212ENST00000539941 ADIPOQQ15848 244 aa14.25□□□□□ -0.13
COPS3-212ENST00000539941 SMIM21Q3B7S5 101 aa14.25□□□□□ -0.13
COPS3-212ENST00000539941 ATPAF1Q5TC12 328 aaPredicted RBP14.25□□□□□ -0.13
COPS3-212ENST00000539941 NEK7Q8TDX7 302 aa14.25□□□□□ -0.13
COPS3-212ENST00000539941 MAFIPQ8WZ33 124 aa14.25□□□□□ -0.13
COPS3-212ENST00000539941 DYRK2Q92630 601 aa14.25□□□□□ -0.13
COPS3-212ENST00000539941 OR2V2Q96R30 315 aa14.25□□□□□ -0.13
COPS3-212ENST00000539941 FN3KRPQ9HA64 309 aa14.25□□□□□ -0.13
COPS3-212ENST00000539941 C1orf123Q9NWV4 160 aa14.25□□□□□ -0.13
COPS3-212ENST00000539941 IL19Q9UHD0 177 aa14.25□□□□□ -0.13
COPS3-212ENST00000539941 OPN4Q9UHM6 478 aa14.25□□□□□ -0.13
COPS3-212ENST00000539941 IGKV1D-8A0A087WSZ0 117 aa14.24□□□□□ -0.13
COPS3-212ENST00000539941 TMEM218A2RU14 115 aa14.24□□□□□ -0.13
COPS3-212ENST00000539941 KNG1P01042 644 aa14.24□□□□□ -0.13
COPS3-212ENST00000539941 ADH4P08319 380 aa14.24□□□□□ -0.13
COPS3-212ENST00000539941 OR4A8P0C604 315 aa14.24□□□□□ -0.13
COPS3-212ENST00000539941 ZNF44P15621 663 aa14.24□□□□□ -0.13
COPS3-212ENST00000539941 GLRA1P23415 457 aa14.24□□□□□ -0.13
COPS3-212ENST00000539941 SNTB1Q13884 538 aaKnown RBP14.24□□□□□ -0.13
COPS3-212ENST00000539941 C10orf91Q5T1B1 145 aa14.24□□□□□ -0.13
COPS3-212ENST00000539941 ACP7Q6ZNF0 438 aa14.24□□□□□ -0.13
COPS3-212ENST00000539941 ZNF826PQ6ZT77 177 aa14.24□□□□□ -0.13
COPS3-212ENST00000539941 LHFPL1Q86WI0 220 aa14.24□□□□□ -0.13
COPS3-212ENST00000539941 FAM90A1Q86YD7 464 aa14.24□□□□□ -0.13
COPS3-212ENST00000539941 PLPPR2Q96GM1 343 aa14.24□□□□□ -0.13
COPS3-212ENST00000539941 BEX1Q9HBH7 125 aa14.24□□□□□ -0.13
COPS3-212ENST00000539941 CHMP1AQ9HD42 196 aaPredicted RBP14.24□□□□□ -0.13
COPS3-212ENST00000539941 UFSP2Q9NUQ7 469 aa14.24□□□□□ -0.13
COPS3-212ENST00000539941 NECAP2Q9NVZ3 263 aa14.24□□□□□ -0.13
COPS3-212ENST00000539941 IGHV3-64DA0A0J9YX35 117 aa14.23□□□□□ -0.13
COPS3-212ENST00000539941 OR2AT4A6NND4 320 aa14.23□□□□□ -0.13
COPS3-212ENST00000539941 SHISA9B4DS77 424 aa14.23□□□□□ -0.13
COPS3-212ENST00000539941 H7C1Q1 480 aa14.23□□□□□ -0.13
COPS3-212ENST00000539941 OR2H2O95918 312 aa14.23□□□□□ -0.13
COPS3-212ENST00000539941 CD3EP07766 207 aa14.23□□□□□ -0.13
COPS3-212ENST00000539941 FBP1P09467 338 aa14.23□□□□□ -0.13
COPS3-212ENST00000539941 VSIG10L2P0DP72 767 aa14.23□□□□□ -0.13
COPS3-212ENST00000539941 AGAP20933 346 aa14.23□□□□□ -0.13
COPS3-212ENST00000539941 ECI1P42126 302 aa14.23□□□□□ -0.13
COPS3-212ENST00000539941 PAN3Q58A45 887 aaKnown RBP14.23□□□□□ -0.13
COPS3-212ENST00000539941 BEX5Q5H9J7 111 aa14.23□□□□□ -0.13
COPS3-212ENST00000539941 ADAM5Q6NVV9 412 aa14.23□□□□□ -0.13
COPS3-212ENST00000539941 ZNF808Q8N4W9 903 aaPredicted RBP14.23□□□□□ -0.13
COPS3-212ENST00000539941 PRR7Q8TB68 274 aa14.23□□□□□ -0.13
COPS3-212ENST00000539941 ERGIC1Q969X5 290 aa14.23□□□□□ -0.13
COPS3-212ENST00000539941 MRGPRFQ96AM1 343 aa14.23□□□□□ -0.13
COPS3-212ENST00000539941 SEBOXQ9HB31 216 aaPredicted RBP14.23□□□□□ -0.13
COPS3-212ENST00000539941 BARX1Q9HBU1 254 aaPredicted RBP14.23□□□□□ -0.13
COPS3-212ENST00000539941 PLCE1Q9P212 2302 aa14.23□□□□□ -0.13
COPS3-212ENST00000539941 VSIG4Q9Y279 399 aa14.23□□□□□ -0.13
COPS3-212ENST00000539941 SRRM5B3KS81 715 aa14.23□□□□□ -0.13
COPS3-212ENST00000539941 IFNL4K9M1U5 179 aa14.23□□□□□ -0.13
COPS3-212ENST00000539941 UBE2CO00762 179 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms