RNA–Protein interactions for RNA: ENST00000539746.1

VTN-202, Transcript of vitronectin, humanhuman

TSL 2

Gene VTN, Length 609 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTN-202ENST00000539746 TRAPPC2P0DI81 140 aa9.85□□□□□ -0.83
VTN-202ENST00000539746 TRAPPC2BP0DI82 140 aa9.85□□□□□ -0.83
VTN-202ENST00000539746 PGAM2P15259 253 aa9.85□□□□□ -0.83
VTN-202ENST00000539746 SLC25A16P16260 332 aa9.85□□□□□ -0.83
VTN-202ENST00000539746 RPL31P62899 125 aaKnown RBP9.85□□□□□ -0.83
VTN-202ENST00000539746 MADCAM1Q13477 382 aa9.85□□□□□ -0.83
VTN-202ENST00000539746 EDDM3AQ14507 147 aa9.85□□□□□ -0.83
VTN-202ENST00000539746 HMGN3Q15651 99 aa9.85□□□□□ -0.83
VTN-202ENST00000539746 SFRP4Q6FHJ7 346 aaPredicted RBP9.85□□□□□ -0.83
VTN-202ENST00000539746 LIN54Q6MZP7 749 aa9.85□□□□□ -0.83
VTN-202ENST00000539746 C17orf107Q6ZR85 190 aa9.85□□□□□ -0.83
VTN-202ENST00000539746 BIVMQ86UB2 503 aa9.85□□□□□ -0.83
VTN-202ENST00000539746 CD177Q8N6Q3 437 aa9.85□□□□□ -0.83
VTN-202ENST00000539746 TCTEX1D1Q8N7M0 179 aa9.85□□□□□ -0.83
VTN-202ENST00000539746 DEFB108BQ8NET1 73 aa9.85□□□□□ -0.83
VTN-202ENST00000539746 CHAC2Q8WUX2 184 aa9.85□□□□□ -0.83
VTN-202ENST00000539746 AKR1E2Q96JD6 320 aa9.85□□□□□ -0.83
VTN-202ENST00000539746 GAFA1Q96PS6 74 aa9.85□□□□□ -0.83
VTN-202ENST00000539746 TAF9BQ9HBM6 251 aa9.85□□□□□ -0.83
VTN-202ENST00000539746 ZNF69Q9UC07 566 aa9.85□□□□□ -0.83
VTN-202ENST00000539746 CACFD1Q9UGQ2 172 aa9.85□□□□□ -0.83
VTN-202ENST00000539746 KIF25Q9UIL4 384 aa9.85□□□□□ -0.83
VTN-202ENST00000539746 KMT2BQ9UMN6 2715 aaPredicted RBP9.85□□□□□ -0.83
VTN-202ENST00000539746 PCNX1Q96RV3 2341 aa9.85□□□□□ -0.83
VTN-202ENST00000539746 NBASA2RRP1 2371 aa9.84□□□□□ -0.83
VTN-202ENST00000539746 hCG_2014768A0A024R1R8 64 aa9.84□□□□□ -0.83
VTN-202ENST00000539746 TRBV6-7A0A0A0MS04 114 aa9.84□□□□□ -0.83
VTN-202ENST00000539746 KBTBD11-OT1A0A1B0GTJ5 212 aa9.84□□□□□ -0.83
VTN-202ENST00000539746 MEIS3P1A6NDR6 274 aa9.84□□□□□ -0.83
VTN-202ENST00000539746 LANCL1O43813 399 aa9.84□□□□□ -0.83
VTN-202ENST00000539746 PSPNO60542 156 aa9.84□□□□□ -0.83
VTN-202ENST00000539746 RP2O75695 350 aa9.84□□□□□ -0.83
VTN-202ENST00000539746 PMP2P02689 132 aa9.84□□□□□ -0.83
VTN-202ENST00000539746 IL5P05113 134 aa9.84□□□□□ -0.83
VTN-202ENST00000539746 ZNF728P0DKX0 622 aa9.84□□□□□ -0.83
VTN-202ENST00000539746 EGR1P18146 543 aa9.84□□□□□ -0.83
VTN-202ENST00000539746 IL3RAP26951 378 aa9.84□□□□□ -0.83
VTN-202ENST00000539746 MECP2P51608 486 aaKnown RBP9.84□□□□□ -0.83
VTN-202ENST00000539746 LUMP51884 338 aaPredicted RBP9.84□□□□□ -0.83
VTN-202ENST00000539746 ATP5J2P56134 94 aa9.84□□□□□ -0.83
VTN-202ENST00000539746 GNB2P62879 340 aa9.84□□□□□ -0.83
VTN-202ENST00000539746 CARTPTQ16568 116 aa9.84□□□□□ -0.83
VTN-202ENST00000539746 KCTD9Q7L273 389 aa9.84□□□□□ -0.83
VTN-202ENST00000539746 SGPP2Q8IWX5 399 aa9.84□□□□□ -0.83
VTN-202ENST00000539746 TEX29Q8N6K0 151 aa9.84□□□□□ -0.83
VTN-202ENST00000539746 GVQW1Q8N7I0 195 aa9.84□□□□□ -0.83
VTN-202ENST00000539746 FAM168AQ92567 244 aa9.84□□□□□ -0.83
VTN-202ENST00000539746 GCDHQ92947 438 aaPredicted RBP9.84□□□□□ -0.83
VTN-202ENST00000539746 TNFRSF14Q92956 283 aa9.84□□□□□ -0.83
VTN-202ENST00000539746 ZNF714Q96N38 554 aa9.84□□□□□ -0.83
VTN-202ENST00000539746 CCL13Q99616 98 aa9.84□□□□□ -0.83
VTN-202ENST00000539746 TMEM246Q9BRR3 403 aa9.84□□□□□ -0.83
VTN-202ENST00000539746 ZNF2Q9BSG1 426 aaPredicted RBP9.84□□□□□ -0.83
VTN-202ENST00000539746 GNG12Q9UBI6 72 aa9.84□□□□□ -0.83
VTN-202ENST00000539746 OR2W1Q9Y3N9 320 aa9.84□□□□□ -0.83
VTN-202ENST00000539746 UBR5O95071 2799 aaPredicted RBP9.84□□□□□ -0.83
VTN-202ENST00000539746 MYO18BQ8IUG5 2567 aa9.83□□□□□ -0.84
VTN-202ENST00000539746 IGHV3OR15-7A0A075B7D8 119 aa9.83□□□□□ -0.84
VTN-202ENST00000539746 M0QYG6 137 aa9.83□□□□□ -0.84
VTN-202ENST00000539746 BET1O15155 118 aa9.83□□□□□ -0.84
VTN-202ENST00000539746 FOXH1O75593 365 aa9.83□□□□□ -0.84
VTN-202ENST00000539746 CLDN1O95832 211 aa9.83□□□□□ -0.84
VTN-202ENST00000539746 CTSDP07339 412 aaPredicted RBP9.83□□□□□ -0.84
VTN-202ENST00000539746 FCGR2CP31995 323 aa9.83□□□□□ -0.84
VTN-202ENST00000539746 TAGLNQ01995 201 aaKnown RBP9.83□□□□□ -0.84
VTN-202ENST00000539746 AESQ08117 197 aa9.83□□□□□ -0.84
VTN-202ENST00000539746 C4orf46Q504U0 113 aa9.83□□□□□ -0.84
VTN-202ENST00000539746 TMEM128Q5BJH2 165 aa9.83□□□□□ -0.84
VTN-202ENST00000539746 ZNF787Q6DD87 383 aa9.83□□□□□ -0.84
VTN-202ENST00000539746 BATF2Q8N1L9 274 aa9.83□□□□□ -0.84
VTN-202ENST00000539746 KIR3DL3Q8N743 410 aa9.83□□□□□ -0.84
VTN-202ENST00000539746 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.83□□□□□ -0.84
VTN-202ENST00000539746 OR2AK2Q8NG84 335 aa9.83□□□□□ -0.84
VTN-202ENST00000539746 OR4S1Q8NGB4 309 aa9.83□□□□□ -0.84
VTN-202ENST00000539746 COQ8AQ8NI60 647 aa9.83□□□□□ -0.84
VTN-202ENST00000539746 IL1F10Q8WWZ1 152 aa9.83□□□□□ -0.84
VTN-202ENST00000539746 ARL11Q969Q4 196 aa9.83□□□□□ -0.84
VTN-202ENST00000539746 MARVELD3Q96A59 401 aa9.83□□□□□ -0.84
VTN-202ENST00000539746 MOB3AQ96BX8 217 aa9.83□□□□□ -0.84
VTN-202ENST00000539746 PHB2Q99623 299 aa9.83□□□□□ -0.84
VTN-202ENST00000539746 AIFM2Q9BRQ8 373 aa9.83□□□□□ -0.84
VTN-202ENST00000539746 TOLLIPQ9H0E2 274 aa9.83□□□□□ -0.84
VTN-202ENST00000539746 SHARPINQ9H0F6 387 aa9.83□□□□□ -0.84
VTN-202ENST00000539746 LINC00574Q9H8X3 128 aa9.83□□□□□ -0.84
VTN-202ENST00000539746 PATZ1Q9HBE1 687 aaKnown RBP9.83□□□□□ -0.84
VTN-202ENST00000539746 IL36RNQ9UBH0 155 aa9.83□□□□□ -0.84
VTN-202ENST00000539746 SPENQ96T58 3664 aaKnown RBP9.83□□□□□ -0.84
VTN-202ENST00000539746 A1L4Q6 167 aa9.82□□□□□ -0.84
VTN-202ENST00000539746 DVL1O14640 695 aa9.82□□□□□ -0.84
VTN-202ENST00000539746 ENSAO43768 121 aaKnown RBP9.82□□□□□ -0.84
VTN-202ENST00000539746 YPEL1O60688 119 aa9.82□□□□□ -0.84
VTN-202ENST00000539746 PPYP01298 95 aa9.82□□□□□ -0.84
VTN-202ENST00000539746 PTHLHP12272 177 aa9.82□□□□□ -0.84
VTN-202ENST00000539746 ARHGDIBP52566 201 aa9.82□□□□□ -0.84
VTN-202ENST00000539746 CATR1Q13166 79 aa9.82□□□□□ -0.84
VTN-202ENST00000539746 CBX3Q13185 183 aa9.82□□□□□ -0.84
VTN-202ENST00000539746 PDCD1Q15116 288 aa9.82□□□□□ -0.84
VTN-202ENST00000539746 PRSS57Q6UWY2 283 aa9.82□□□□□ -0.84
VTN-202ENST00000539746 BTNL3Q6UXE8 466 aa9.82□□□□□ -0.84
VTN-202ENST00000539746 C1orf122Q6ZSJ8 110 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms