RNA–Protein interactions for RNA: ENST00000539563.5

LSAMP-207, Transcript of limbic system associated membrane protein, humanhuman

TSL 3 BASIC

Gene LSAMP, Length 8,821 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-207ENST00000539563 ERVFRD-1P60508 538 aa5.68□□□□□ -1.5
LSAMP-207ENST00000539563 LRP11Q86VZ4 500 aa5.68□□□□□ -1.5
LSAMP-207ENST00000539563 CBY1Q9Y3M2 126 aa5.68□□□□□ -1.5
LSAMP-207ENST00000539563 HRKO00198 91 aa5.68□□□□□ -1.5
LSAMP-207ENST00000539563 RAB29O14966 203 aa5.68□□□□□ -1.5
LSAMP-207ENST00000539563 MMP16P51512 607 aa5.68□□□□□ -1.5
LSAMP-207ENST00000539563 PMS2P11Q13670 270 aa5.68□□□□□ -1.5
LSAMP-207ENST00000539563 GAPTQ8N292 157 aa5.68□□□□□ -1.5
LSAMP-207ENST00000539563 HARBI1Q96MB7 349 aa5.68□□□□□ -1.5
LSAMP-207ENST00000539563 ST6GALNAC2Q9UJ37 374 aa5.68□□□□□ -1.5
LSAMP-207ENST00000539563 V9GYH0 126 aa5.68□□□□□ -1.5
LSAMP-207ENST00000539563 AGFG2O95081 481 aa5.68□□□□□ -1.5
LSAMP-207ENST00000539563 ERGP11308 486 aa5.68□□□□□ -1.5
LSAMP-207ENST00000539563 TFF2Q03403 129 aa5.68□□□□□ -1.5
LSAMP-207ENST00000539563 IRF3Q14653 427 aa5.68□□□□□ -1.5
LSAMP-207ENST00000539563 C3AR1Q16581 482 aa5.68□□□□□ -1.5
LSAMP-207ENST00000539563 ANKRD55Q3KP44 614 aa5.68□□□□□ -1.5
LSAMP-207ENST00000539563 CHCHD2P9Q5T1J5 151 aaPredicted RBP5.68□□□□□ -1.5
LSAMP-207ENST00000539563 SEZ6L2Q6UXD5 910 aa5.68□□□□□ -1.5
LSAMP-207ENST00000539563 RBPMS2Q6ZRY4 209 aaKnown RBP5.68□□□□□ -1.5
LSAMP-207ENST00000539563 ZNF596Q8TC21 504 aa5.68□□□□□ -1.5
LSAMP-207ENST00000539563 A0A1W2PQF6 199 aa5.67□□□□□ -1.5
LSAMP-207ENST00000539563 KIAA1324LA8MWY0 1029 aaPredicted RBP5.67□□□□□ -1.5
LSAMP-207ENST00000539563 PHOX2AO14813 284 aa5.67□□□□□ -1.5
LSAMP-207ENST00000539563 SPINT1O43278 529 aa5.67□□□□□ -1.5
LSAMP-207ENST00000539563 TSPAN2O60636 221 aa5.67□□□□□ -1.5
LSAMP-207ENST00000539563 MOSPD3O75425 235 aa5.67□□□□□ -1.5
LSAMP-207ENST00000539563 SCO1O75880 301 aa5.67□□□□□ -1.5
LSAMP-207ENST00000539563 NPY1RP25929 384 aa5.67□□□□□ -1.5
LSAMP-207ENST00000539563 MVDP53602 400 aa5.67□□□□□ -1.5
LSAMP-207ENST00000539563 SLC23A3Q6PIS1 610 aa5.67□□□□□ -1.5
LSAMP-207ENST00000539563 THADAQ6YHU6 1953 aa5.67□□□□□ -1.5
LSAMP-207ENST00000539563 MRGPRGQ86SM5 289 aa5.67□□□□□ -1.5
LSAMP-207ENST00000539563 MDP1Q86V88 176 aa5.67□□□□□ -1.5
LSAMP-207ENST00000539563 TEX29Q8N6K0 151 aa5.67□□□□□ -1.5
LSAMP-207ENST00000539563 OR2T10Q8NGZ9 312 aa5.67□□□□□ -1.5
LSAMP-207ENST00000539563 DTD1Q8TEA8 209 aa5.67□□□□□ -1.5
LSAMP-207ENST00000539563 KCNK15Q9H427 330 aa5.67□□□□□ -1.5
LSAMP-207ENST00000539563 TNS1Q9HBL0 1735 aaKnown RBP5.67□□□□□ -1.5
LSAMP-207ENST00000539563 SIRT7Q9NRC8 400 aa5.67□□□□□ -1.5
LSAMP-207ENST00000539563 SLC2A9Q9NRM0 540 aa5.67□□□□□ -1.5
LSAMP-207ENST00000539563 FAM74A7A6NL05 159 aa5.67□□□□□ -1.5
LSAMP-207ENST00000539563 NPAS1Q99742 590 aa5.67□□□□□ -1.5
LSAMP-207ENST00000539563 IGHV1-45A0A0A0MS14 117 aa5.67□□□□□ -1.5
LSAMP-207ENST00000539563 PITX3O75364 302 aa5.67□□□□□ -1.5
LSAMP-207ENST00000539563 HOXB1P14653 301 aaPredicted RBP5.67□□□□□ -1.5
LSAMP-207ENST00000539563 AREGP15514 252 aa5.67□□□□□ -1.5
LSAMP-207ENST00000539563 HERVK_113P61574 105 aa5.67□□□□□ -1.5
LSAMP-207ENST00000539563 KLF9Q13886 244 aaPredicted RBP5.67□□□□□ -1.5
LSAMP-207ENST00000539563 LGALSLQ3ZCW2 172 aaPredicted RBP5.67□□□□□ -1.5
LSAMP-207ENST00000539563 C1QL3Q5VWW1 255 aa5.67□□□□□ -1.5
LSAMP-207ENST00000539563 FAM219BQ5XKK7 198 aa5.67□□□□□ -1.5
LSAMP-207ENST00000539563 OR1L6Q8NGR2 347 aa5.67□□□□□ -1.5
LSAMP-207ENST00000539563 ZNF501Q96CX3 271 aaPredicted RBP5.67□□□□□ -1.5
LSAMP-207ENST00000539563 OR10C1Q96KK4 312 aa5.67□□□□□ -1.5
LSAMP-207ENST00000539563 SMDT1Q9H4I9 107 aa5.67□□□□□ -1.5
LSAMP-207ENST00000539563 PRSS50Q9UI38 385 aa5.67□□□□□ -1.5
LSAMP-207ENST00000539563 SYNGR1O43759 233 aa5.67□□□□□ -1.5
LSAMP-207ENST00000539563 FGF5P12034 268 aa5.67□□□□□ -1.5
LSAMP-207ENST00000539563 FABP4P15090 132 aa5.67□□□□□ -1.5
LSAMP-207ENST00000539563 FGF8P55075 233 aaPredicted RBP5.67□□□□□ -1.5
LSAMP-207ENST00000539563 SMAGPQ0VAQ4 97 aa5.67□□□□□ -1.5
LSAMP-207ENST00000539563 PSG5Q15238 335 aa5.67□□□□□ -1.5
LSAMP-207ENST00000539563 PIGYQ3MUY2 71 aa5.67□□□□□ -1.5
LSAMP-207ENST00000539563 TEPPQ6URK8 271 aa5.67□□□□□ -1.5
LSAMP-207ENST00000539563 UCN2Q96RP3 112 aa5.67□□□□□ -1.5
LSAMP-207ENST00000539563 NYNRINQ9P2P1 1898 aaKnown RBP5.67□□□□□ -1.5
LSAMP-207ENST00000539563 DOCK4Q8N1I0 1966 aa5.67□□□□□ -1.5
LSAMP-207ENST00000539563 FOXS1O43638 330 aa5.67□□□□□ -1.5
LSAMP-207ENST00000539563 BSXQ3C1V8 233 aa5.67□□□□□ -1.5
LSAMP-207ENST00000539563 HOGA1Q86XE5 327 aa5.67□□□□□ -1.5
LSAMP-207ENST00000539563 FAM24BQ8N5W8 94 aa5.67□□□□□ -1.5
LSAMP-207ENST00000539563 OR4D10Q8NGI6 311 aa5.67□□□□□ -1.5
LSAMP-207ENST00000539563 PGLYRP3Q96LB9 341 aa5.67□□□□□ -1.5
LSAMP-207ENST00000539563 TREM2Q9NZC2 230 aa5.67□□□□□ -1.5
LSAMP-207ENST00000539563 SLC25A10Q9UBX3 287 aaPredicted RBP5.67□□□□□ -1.5
LSAMP-207ENST00000539563 C11orf94C9JXX5 98 aa5.67□□□□□ -1.5
LSAMP-207ENST00000539563 ADAP1O75689 374 aa5.67□□□□□ -1.5
LSAMP-207ENST00000539563 P01737 135 aa5.67□□□□□ -1.5
LSAMP-207ENST00000539563 ARG1P05089 322 aa5.67□□□□□ -1.5
LSAMP-207ENST00000539563 FAM87AP0C7U9 286 aa5.67□□□□□ -1.5
LSAMP-207ENST00000539563 HIKESHIQ53FT3 197 aa5.67□□□□□ -1.5
LSAMP-207ENST00000539563 DCAF10Q5QP82 559 aa5.67□□□□□ -1.5
LSAMP-207ENST00000539563 FAM78BQ5VT40 261 aa5.67□□□□□ -1.5
LSAMP-207ENST00000539563 C10orf113Q5VZT2 155 aa5.67□□□□□ -1.5
LSAMP-207ENST00000539563 PMS2CLQ68D20 193 aa5.67□□□□□ -1.5
LSAMP-207ENST00000539563 ADAD2Q8NCV1 583 aaKnown RBP5.67□□□□□ -1.5
LSAMP-207ENST00000539563 OR10A7Q8NGE5 316 aa5.67□□□□□ -1.5
LSAMP-207ENST00000539563 OR10D4PQ8NGN7 298 aa5.67□□□□□ -1.5
LSAMP-207ENST00000539563 ELOA3CA0A087WX78 387 aaPredicted RBP5.66□□□□□ -1.5
LSAMP-207ENST00000539563 A0A1W2PNV4 684 aa5.66□□□□□ -1.5
LSAMP-207ENST00000539563 FGF12P61328 243 aa5.66□□□□□ -1.5
LSAMP-207ENST00000539563 FAM27BQ5VT28 67 aa5.66□□□□□ -1.5
LSAMP-207ENST00000539563 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa5.66□□□□□ -1.5
LSAMP-207ENST00000539563 HSD17B13Q7Z5P4 300 aaPredicted RBP5.66□□□□□ -1.5
LSAMP-207ENST00000539563 TMEM171Q8WVE6 324 aa5.66□□□□□ -1.5
LSAMP-207ENST00000539563 MRGPRFQ96AM1 343 aa5.66□□□□□ -1.5
LSAMP-207ENST00000539563 MS4A10Q96PG2 267 aa5.66□□□□□ -1.5
LSAMP-207ENST00000539563 TTTY12Q9BZ98 90 aa5.66□□□□□ -1.5
LSAMP-207ENST00000539563 BET1LQ9NYM9 111 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 122.2 ms