RNA–Protein interactions for RNA: ENST00000539559.6

TMEM260-203, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 2,680 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-203ENST00000539559 HLA-DRB3P79483 266 aa17.38■□□□□ 0.37
TMEM260-203ENST00000539559 ID3Q02535 119 aa17.38■□□□□ 0.37
TMEM260-203ENST00000539559 SPIN2AQ99865 258 aa17.38■□□□□ 0.37
TMEM260-203ENST00000539559 SPIN2BQ9BPZ2 258 aa17.38■□□□□ 0.37
TMEM260-203ENST00000539559 NCKAP5O14513 1909 aa17.38■□□□□ 0.37
TMEM260-203ENST00000539559 A0A087WWC5 75 aa17.38■□□□□ 0.37
TMEM260-203ENST00000539559 RPL36A-HNRNPH2H7BZ11 118 aa17.38■□□□□ 0.37
TMEM260-203ENST00000539559 F10P00742 488 aa17.38■□□□□ 0.37
TMEM260-203ENST00000539559 GPM6AP51674 278 aa17.38■□□□□ 0.37
TMEM260-203ENST00000539559 MRPL14Q6P1L8 145 aaKnown RBP17.38■□□□□ 0.37
TMEM260-203ENST00000539559 CPEB3Q8NE35 698 aaKnown RBP17.38■□□□□ 0.37
TMEM260-203ENST00000539559 PTRH2Q9Y3E5 179 aaKnown RBP17.38■□□□□ 0.37
TMEM260-203ENST00000539559 A0A087WZY1 265 aa17.37■□□□□ 0.37
TMEM260-203ENST00000539559 IGFBP7Q16270 282 aa17.37■□□□□ 0.37
TMEM260-203ENST00000539559 GNPNAT1Q96EK6 184 aaPredicted RBP17.37■□□□□ 0.37
TMEM260-203ENST00000539559 FAM210BQ96KR6 192 aa17.37■□□□□ 0.37
TMEM260-203ENST00000539559 ATP5SQ99766 215 aa17.37■□□□□ 0.37
TMEM260-203ENST00000539559 Q9N2K0 584 aa17.37■□□□□ 0.37
TMEM260-203ENST00000539559 ZNF816-ZNF321PA0A0X1KG74 233 aa17.37■□□□□ 0.37
TMEM260-203ENST00000539559 BTBD17A6NE02 478 aa17.37■□□□□ 0.37
TMEM260-203ENST00000539559 SEC14L6B5MCN3 397 aa17.37■□□□□ 0.37
TMEM260-203ENST00000539559 RNF224P0DH78 156 aa17.37■□□□□ 0.37
TMEM260-203ENST00000539559 PGA5P0DJD9 388 aa17.37■□□□□ 0.37
TMEM260-203ENST00000539559 MMP9P14780 707 aa17.37■□□□□ 0.37
TMEM260-203ENST00000539559 RAC1P63000 192 aa17.37■□□□□ 0.37
TMEM260-203ENST00000539559 SRPXP78539 464 aa17.37■□□□□ 0.37
TMEM260-203ENST00000539559 TLE4Q04727 773 aa17.37■□□□□ 0.37
TMEM260-203ENST00000539559 FAM90A2PQ658T7 463 aa17.37■□□□□ 0.37
TMEM260-203ENST00000539559 ZNF295-AS1Q8N0V1 137 aa17.37■□□□□ 0.37
TMEM260-203ENST00000539559 SNX22Q96L94 193 aa17.37■□□□□ 0.37
TMEM260-203ENST00000539559 ZNF488Q96MN9 340 aa17.37■□□□□ 0.37
TMEM260-203ENST00000539559 RPRMQ9NS64 109 aa17.37■□□□□ 0.37
TMEM260-203ENST00000539559 LOC102723971A0A1B0GUV8 181 aa17.36■□□□□ 0.37
TMEM260-203ENST00000539559 UMODP07911 640 aa17.36■□□□□ 0.37
TMEM260-203ENST00000539559 IAPPP10997 89 aa17.36■□□□□ 0.37
TMEM260-203ENST00000539559 VDAC1P21796 283 aa17.36■□□□□ 0.37
TMEM260-203ENST00000539559 DUSP3P51452 185 aaPredicted RBP17.36■□□□□ 0.37
TMEM260-203ENST00000539559 TAS2R30P59541 319 aa17.36■□□□□ 0.37
TMEM260-203ENST00000539559 C20orf204Q6ZNR8 217 aa17.36■□□□□ 0.37
TMEM260-203ENST00000539559 OR56B2PQ8NGI1 322 aa17.36■□□□□ 0.37
TMEM260-203ENST00000539559 C14orf144Q96I85 54 aa17.36■□□□□ 0.37
TMEM260-203ENST00000539559 IL36GQ9NZH8 169 aa17.36■□□□□ 0.37
TMEM260-203ENST00000539559 RNF115Q9Y4L5 304 aa17.36■□□□□ 0.37
TMEM260-203ENST00000539559 TRAV39A0A0B4J263 110 aa17.36■□□□□ 0.37
TMEM260-203ENST00000539559 RFPL3SP0C7P2 107 aa17.36■□□□□ 0.37
TMEM260-203ENST00000539559 CARD18P57730 90 aa17.36■□□□□ 0.37
TMEM260-203ENST00000539559 MEGF10Q96KG7 1140 aa17.36■□□□□ 0.37
TMEM260-203ENST00000539559 DOCK7Q96N67 2140 aa17.36■□□□□ 0.37
TMEM260-203ENST00000539559 PLSCR2Q9NRY7 297 aa17.36■□□□□ 0.37
TMEM260-203ENST00000539559 KIAA2026Q5HYC2 2103 aa17.36■□□□□ 0.37
TMEM260-203ENST00000539559 IGHV1-45A0A0A0MS14 117 aa17.35■□□□□ 0.37
TMEM260-203ENST00000539559 A0A1B0GV90 55 aa17.35■□□□□ 0.37
TMEM260-203ENST00000539559 SSR4P51571 173 aa17.35■□□□□ 0.37
TMEM260-203ENST00000539559 OR8B8Q15620 311 aa17.35■□□□□ 0.37
TMEM260-203ENST00000539559 Q6ZRM9 215 aa17.35■□□□□ 0.37
TMEM260-203ENST00000539559 UBALD1Q8TB05 177 aa17.35■□□□□ 0.37
TMEM260-203ENST00000539559 ABHD3Q8WU67 409 aa17.35■□□□□ 0.37
TMEM260-203ENST00000539559 INTS12Q96CB8 462 aaKnown RBP17.35■□□□□ 0.37
TMEM260-203ENST00000539559 SMOC1Q9H4F8 434 aa17.35■□□□□ 0.37
TMEM260-203ENST00000539559 A0A096LPE4 126 aa17.35■□□□□ 0.37
TMEM260-203ENST00000539559 A0A1W2PPZ6 126 aa17.35■□□□□ 0.37
TMEM260-203ENST00000539559 UCP1P25874 307 aa17.35■□□□□ 0.37
TMEM260-203ENST00000539559 OR8G5Q8NG78 346 aa17.35■□□□□ 0.37
TMEM260-203ENST00000539559 GPR146Q96CH1 333 aa17.35■□□□□ 0.37
TMEM260-203ENST00000539559 ZNF845Q96IR2 970 aaPredicted RBP17.35■□□□□ 0.37
TMEM260-203ENST00000539559 GFOD1Q9NXC2 390 aa17.35■□□□□ 0.37
TMEM260-203ENST00000539559 ZDBF2Q9HCK1 2354 aa17.35■□□□□ 0.37
TMEM260-203ENST00000539559 TECTAO75443 2155 aa17.35■□□□□ 0.37
TMEM260-203ENST00000539559 ZNF716A6NP11 495 aa17.34■□□□□ 0.37
TMEM260-203ENST00000539559 PGLYRP1O75594 196 aaPredicted RBP17.34■□□□□ 0.37
TMEM260-203ENST00000539559 CD55P08174 381 aa17.34■□□□□ 0.37
TMEM260-203ENST00000539559 ARL16Q0P5N6 197 aa17.34■□□□□ 0.37
TMEM260-203ENST00000539559 ZNF726P1Q15940 193 aa17.34■□□□□ 0.37
TMEM260-203ENST00000539559 SLC35E3Q7Z769 313 aa17.34■□□□□ 0.37
TMEM260-203ENST00000539559 FAM185AQ8N0U4 392 aa17.34■□□□□ 0.37
TMEM260-203ENST00000539559 FAM86C1Q9NVL1 165 aa17.34■□□□□ 0.37
TMEM260-203ENST00000539559 HS3ST1O14792 307 aa17.34■□□□□ 0.37
TMEM260-203ENST00000539559 METTL15P1P0C7V9 234 aa17.34■□□□□ 0.37
TMEM260-203ENST00000539559 PSG2P11465 335 aa17.34■□□□□ 0.37
TMEM260-203ENST00000539559 COX6A1P12074 109 aa17.34■□□□□ 0.37
TMEM260-203ENST00000539559 HIST1H1BP16401 226 aaKnown RBP17.34■□□□□ 0.37
TMEM260-203ENST00000539559 CLEC12BQ2HXU8 276 aa17.34■□□□□ 0.37
TMEM260-203ENST00000539559 RBMXL1Q96E39 390 aaKnown RBP17.34■□□□□ 0.37
TMEM260-203ENST00000539559 OR5H1A6NKK0 313 aa17.34■□□□□ 0.37
TMEM260-203ENST00000539559 TRAPPC6AO75865 159 aa17.34■□□□□ 0.37
TMEM260-203ENST00000539559 RAC3P60763 192 aa17.34■□□□□ 0.37
TMEM260-203ENST00000539559 ZFP36L1Q07352 338 aaKnown RBP17.34■□□□□ 0.37
TMEM260-203ENST00000539559 ZNF787Q6DD87 383 aa17.34■□□□□ 0.37
TMEM260-203ENST00000539559 TMEM105Q8N8V8 129 aa17.34■□□□□ 0.37
TMEM260-203ENST00000539559 NECAP1Q8NC96 275 aa17.34■□□□□ 0.37
TMEM260-203ENST00000539559 RNASE11Q8TAA1 199 aaKnown RBP17.34■□□□□ 0.37
TMEM260-203ENST00000539559 OPA3Q9H6K4 179 aa17.34■□□□□ 0.37
TMEM260-203ENST00000539559 MTCH1Q9NZJ7 389 aa17.34■□□□□ 0.37
TMEM260-203ENST00000539559 R4GN57 208 aa17.34■□□□□ 0.37
TMEM260-203ENST00000539559 IL11RAQ14626 422 aa17.33■□□□□ 0.36
TMEM260-203ENST00000539559 WIPI1Q5MNZ9 446 aaPredicted RBP17.33■□□□□ 0.36
TMEM260-203ENST00000539559 BEND4Q6ZU67 534 aa17.33■□□□□ 0.36
TMEM260-203ENST00000539559 OR1K1Q8NGR3 316 aa17.33■□□□□ 0.36
TMEM260-203ENST00000539559 CPT1CQ8TCG5 803 aa17.33■□□□□ 0.36
TMEM260-203ENST00000539559 RDH5Q92781 318 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms