RNA–Protein interactions for RNA: ENST00000539506.5

SFSWAP-208, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 3,149 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-208ENST00000539506 TMEM267Q0VDI3 215 aaPredicted RBP10.79□□□□□ -0.68
SFSWAP-208ENST00000539506 THNSL2Q86YJ6 484 aa10.79□□□□□ -0.68
SFSWAP-208ENST00000539506 OR2V1Q8NHB1 315 aa10.79□□□□□ -0.68
SFSWAP-208ENST00000539506 PIGCQ92535 297 aa10.79□□□□□ -0.68
SFSWAP-208ENST00000539506 MSI2Q96DH6 328 aaKnown RBP10.79□□□□□ -0.68
SFSWAP-208ENST00000539506 HS3ST6Q96QI5 342 aa10.79□□□□□ -0.68
SFSWAP-208ENST00000539506 VSIRQ9H7M9 311 aa10.79□□□□□ -0.68
SFSWAP-208ENST00000539506 PLA2G3Q9NZ20 509 aa10.79□□□□□ -0.68
SFSWAP-208ENST00000539506 TREM2Q9NZC2 230 aa10.79□□□□□ -0.68
SFSWAP-208ENST00000539506 TRAV39A0A0B4J263 110 aa10.78□□□□□ -0.68
SFSWAP-208ENST00000539506 ZNF705GA8MUZ8 300 aaPredicted RBP10.78□□□□□ -0.68
SFSWAP-208ENST00000539506 PROB1E7EW31 1015 aa10.78□□□□□ -0.68
SFSWAP-208ENST00000539506 DNPH1O43598 174 aa10.78□□□□□ -0.68
SFSWAP-208ENST00000539506 SRP19P09132 144 aaKnown RBP10.78□□□□□ -0.68
SFSWAP-208ENST00000539506 MMP7P09237 267 aaPredicted RBP10.78□□□□□ -0.68
SFSWAP-208ENST00000539506 FOXG1P55316 489 aaPredicted RBP10.78□□□□□ -0.68
SFSWAP-208ENST00000539506 LGI3Q8N145 548 aa10.78□□□□□ -0.68
SFSWAP-208ENST00000539506 CT55Q8WUE5 264 aa10.78□□□□□ -0.68
SFSWAP-208ENST00000539506 KCNE4Q8WWG9 221 aa10.78□□□□□ -0.68
SFSWAP-208ENST00000539506 BORCS8Q96FH0 119 aa10.78□□□□□ -0.68
SFSWAP-208ENST00000539506 ATG101Q9BSB4 218 aa10.78□□□□□ -0.68
SFSWAP-208ENST00000539506 RSG1Q9BU20 258 aa10.78□□□□□ -0.68
SFSWAP-208ENST00000539506 UFSP2Q9NUQ7 469 aa10.78□□□□□ -0.68
SFSWAP-208ENST00000539506 IL36RNQ9UBH0 155 aa10.78□□□□□ -0.68
SFSWAP-208ENST00000539506 IGHV3-64DA0A0J9YX35 117 aa10.78□□□□□ -0.68
SFSWAP-208ENST00000539506 FUT3P21217 361 aa10.78□□□□□ -0.68
SFSWAP-208ENST00000539506 NKX2-1P43699 371 aaPredicted RBP10.78□□□□□ -0.68
SFSWAP-208ENST00000539506 HERV-K104P61576 105 aa10.78□□□□□ -0.68
SFSWAP-208ENST00000539506 VAMP2P63027 116 aa10.78□□□□□ -0.68
SFSWAP-208ENST00000539506 ZNF695Q8IW36 515 aa10.78□□□□□ -0.68
SFSWAP-208ENST00000539506 FGF23Q9GZV9 251 aaPredicted RBP10.78□□□□□ -0.68
SFSWAP-208ENST00000539506 GFOD1Q9NXC2 390 aa10.78□□□□□ -0.68
SFSWAP-208ENST00000539506 A0A087X0M5 115 aa10.78□□□□□ -0.68
SFSWAP-208ENST00000539506 A0A1B0GX30 115 aa10.78□□□□□ -0.68
SFSWAP-208ENST00000539506 ZNF503-AS2A6NEH8 195 aa10.78□□□□□ -0.68
SFSWAP-208ENST00000539506 C19orf67A6NJJ6 358 aa10.78□□□□□ -0.68
SFSWAP-208ENST00000539506 CCL2P13500 99 aa10.78□□□□□ -0.68
SFSWAP-208ENST00000539506 ICAM4Q14773 271 aa10.78□□□□□ -0.68
SFSWAP-208ENST00000539506 BOD1Q96IK1 185 aa10.78□□□□□ -0.68
SFSWAP-208ENST00000539506 HES7Q9BYE0 225 aa10.78□□□□□ -0.68
SFSWAP-208ENST00000539506 CALHM2Q9HA72 323 aa10.78□□□□□ -0.68
SFSWAP-208ENST00000539506 COLQQ9Y215 455 aaPredicted RBP10.78□□□□□ -0.68
SFSWAP-208ENST00000539506 DOCK11Q5JSL3 2073 aa10.77□□□□□ -0.68
SFSWAP-208ENST00000539506 GPR179Q6PRD1 2367 aa10.77□□□□□ -0.69
SFSWAP-208ENST00000539506 CHST1O43916 411 aa10.77□□□□□ -0.69
SFSWAP-208ENST00000539506 BMP5P22003 454 aa10.77□□□□□ -0.69
SFSWAP-208ENST00000539506 PAX6P26367 422 aa10.77□□□□□ -0.69
SFSWAP-208ENST00000539506 GDF1P27539 372 aa10.77□□□□□ -0.69
SFSWAP-208ENST00000539506 DUSP3P51452 185 aaPredicted RBP10.77□□□□□ -0.69
SFSWAP-208ENST00000539506 ZXDAP98168 799 aa10.77□□□□□ -0.69
SFSWAP-208ENST00000539506 OSR2Q8N2R0 312 aa10.77□□□□□ -0.69
SFSWAP-208ENST00000539506 NEK7Q8TDX7 302 aa10.77□□□□□ -0.69
SFSWAP-208ENST00000539506 GUCD1Q96NT3 240 aa10.77□□□□□ -0.69
SFSWAP-208ENST00000539506 ZNF665Q9H7R5 613 aa10.77□□□□□ -0.69
SFSWAP-208ENST00000539506 AHCTF1Q8WYP5 2266 aa10.77□□□□□ -0.69
SFSWAP-208ENST00000539506 GALR2O43603 387 aaPredicted RBP10.77□□□□□ -0.69
SFSWAP-208ENST00000539506 CER1O95813 267 aa10.77□□□□□ -0.69
SFSWAP-208ENST00000539506 APLNRP35414 380 aa10.77□□□□□ -0.69
SFSWAP-208ENST00000539506 ARL6IP1Q15041 203 aa10.77□□□□□ -0.69
SFSWAP-208ENST00000539506 CNN3Q15417 329 aaKnown RBP10.77□□□□□ -0.69
SFSWAP-208ENST00000539506 OR8B8Q15620 311 aa10.77□□□□□ -0.69
SFSWAP-208ENST00000539506 BEND4Q6ZU67 534 aa10.77□□□□□ -0.69
SFSWAP-208ENST00000539506 LHFPL2Q6ZUX7 228 aa10.77□□□□□ -0.69
SFSWAP-208ENST00000539506 CMTM1Q8IZ96 169 aa10.77□□□□□ -0.69
SFSWAP-208ENST00000539506 PRR18Q8N4B5 295 aa10.77□□□□□ -0.69
SFSWAP-208ENST00000539506 TMEM252Q8N6L7 170 aa10.77□□□□□ -0.69
SFSWAP-208ENST00000539506 NIPSNAP3BQ9BS92 247 aa10.77□□□□□ -0.69
SFSWAP-208ENST00000539506 SLC7A10Q9NS82 523 aa10.77□□□□□ -0.69
SFSWAP-208ENST00000539506 DSPP15924 2871 aaKnown RBP10.76□□□□□ -0.69
SFSWAP-208ENST00000539506 C3orf85A0A1B0GTC6 90 aa10.76□□□□□ -0.69
SFSWAP-208ENST00000539506 A0A1W2PNU3 283 aaPredicted RBP10.76□□□□□ -0.69
SFSWAP-208ENST00000539506 LAMTOR5O43504 91 aa10.76□□□□□ -0.69
SFSWAP-208ENST00000539506 GATCO43716 136 aaKnown RBP10.76□□□□□ -0.69
SFSWAP-208ENST00000539506 CYTIPO60759 359 aa10.76□□□□□ -0.69
SFSWAP-208ENST00000539506 SCTP09683 121 aa10.76□□□□□ -0.69
SFSWAP-208ENST00000539506 PRSS8Q16651 343 aa10.76□□□□□ -0.69
SFSWAP-208ENST00000539506 AKR1C8PQ5T2L2 129 aa10.76□□□□□ -0.69
SFSWAP-208ENST00000539506 RTL6Q6ICC9 239 aa10.76□□□□□ -0.69
SFSWAP-208ENST00000539506 TBC1D26Q86UD7 250 aa10.76□□□□□ -0.69
SFSWAP-208ENST00000539506 OR51H1Q8NH63 302 aa10.76□□□□□ -0.69
SFSWAP-208ENST00000539506 MISP3Q96FF7 219 aa10.76□□□□□ -0.69
SFSWAP-208ENST00000539506 C18orf12Q96KH6 178 aa10.76□□□□□ -0.69
SFSWAP-208ENST00000539506 YPEL4Q96NS1 127 aa10.76□□□□□ -0.69
SFSWAP-208ENST00000539506 ARV1Q9H2C2 271 aa10.76□□□□□ -0.69
SFSWAP-208ENST00000539506 LOXL2Q9Y4K0 774 aa10.76□□□□□ -0.69
SFSWAP-208ENST00000539506 DCHS1Q96JQ0 3298 aa10.76□□□□□ -0.69
SFSWAP-208ENST00000539506 CHD3Q12873 2000 aaKnown RBP10.76□□□□□ -0.69
SFSWAP-208ENST00000539506 IAPPP10997 89 aa10.76□□□□□ -0.69
SFSWAP-208ENST00000539506 DTYMKP23919 212 aa10.76□□□□□ -0.69
SFSWAP-208ENST00000539506 SRYQ05066 204 aa10.76□□□□□ -0.69
SFSWAP-208ENST00000539506 DCAF12Q5T6F0 453 aa10.76□□□□□ -0.69
SFSWAP-208ENST00000539506 HIST3H2BBQ8N257 126 aa10.76□□□□□ -0.69
SFSWAP-208ENST00000539506 SIGLEC12Q96PQ1 595 aa10.76□□□□□ -0.69
SFSWAP-208ENST00000539506 A0A096LPE4 126 aa10.75□□□□□ -0.69
SFSWAP-208ENST00000539506 A0A1W2PPZ6 126 aa10.75□□□□□ -0.69
SFSWAP-208ENST00000539506 B4E171 279 aa10.75□□□□□ -0.69
SFSWAP-208ENST00000539506 SOX15O60248 233 aa10.75□□□□□ -0.69
SFSWAP-208ENST00000539506 CYB561P49447 251 aa10.75□□□□□ -0.69
SFSWAP-208ENST00000539506 PLCXD3Q63HM9 321 aa10.75□□□□□ -0.69
SFSWAP-208ENST00000539506 ZNF100Q8IYN0 542 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 107.1 ms