RNA–Protein interactions for RNA: ENST00000539197.5

CCDC7-209, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-209ENST00000539197 A8MWP4 228 aa1.23□□□□□ -2.21
CCDC7-209ENST00000539197 H3BMM0 161 aa1.23□□□□□ -2.21
CCDC7-209ENST00000539197 UBDO15205 165 aa1.23□□□□□ -2.21
CCDC7-209ENST00000539197 FABP7O15540 132 aa1.23□□□□□ -2.21
CCDC7-209ENST00000539197 MPZL2O60487 215 aa1.23□□□□□ -2.21
CCDC7-209ENST00000539197 SCN2BO60939 215 aa1.23□□□□□ -2.21
CCDC7-209ENST00000539197 SNAP29O95721 258 aa1.23□□□□□ -2.21
CCDC7-209ENST00000539197 CA2P00918 260 aa1.23□□□□□ -2.21
CCDC7-209ENST00000539197 HLA-AP01891 365 aaKnown RBP1.23□□□□□ -2.21
CCDC7-209ENST00000539197 SCGB1C2P0DMR2 95 aa1.23□□□□□ -2.21
CCDC7-209ENST00000539197 SLC2A1P11166 492 aa1.23□□□□□ -2.21
CCDC7-209ENST00000539197 SPNP16150 400 aa1.23□□□□□ -2.21
CCDC7-209ENST00000539197 KDELR2P33947 212 aa1.23□□□□□ -2.21
CCDC7-209ENST00000539197 CD151P48509 253 aa1.23□□□□□ -2.21
CCDC7-209ENST00000539197 NXNL2Q5VZ03 156 aa1.23□□□□□ -2.21
CCDC7-209ENST00000539197 LAIR2Q6ISS4 152 aa1.23□□□□□ -2.21
CCDC7-209ENST00000539197 MRPL52Q86TS9 123 aaKnown RBP1.23□□□□□ -2.21
CCDC7-209ENST00000539197 BOD1L2Q8IYS8 172 aa1.23□□□□□ -2.21
CCDC7-209ENST00000539197 HS3ST5Q8IZT8 346 aa1.23□□□□□ -2.21
CCDC7-209ENST00000539197 ZIC4Q8N9L1 334 aa1.23□□□□□ -2.21
CCDC7-209ENST00000539197 DNAAF3Q8N9W5 541 aa1.23□□□□□ -2.21
CCDC7-209ENST00000539197 OR2M3Q8NG83 312 aa1.23□□□□□ -2.21
CCDC7-209ENST00000539197 OR10D4PQ8NGN7 298 aa1.23□□□□□ -2.21
CCDC7-209ENST00000539197 ANGPTL6Q8NI99 470 aa1.23□□□□□ -2.21
CCDC7-209ENST00000539197 FAM45AQ8TCE6 357 aa1.23□□□□□ -2.21
CCDC7-209ENST00000539197 SCGB1C1Q8TD33 95 aa1.23□□□□□ -2.21
CCDC7-209ENST00000539197 RORBQ92753 470 aa1.23□□□□□ -2.21
CCDC7-209ENST00000539197 MAL2Q969L2 176 aa1.23□□□□□ -2.21
CCDC7-209ENST00000539197 UBE2WQ96B02 151 aa1.23□□□□□ -2.21
CCDC7-209ENST00000539197 PYURFQ96I23 114 aa1.23□□□□□ -2.21
CCDC7-209ENST00000539197 FAM210AQ96ND0 272 aa1.23□□□□□ -2.21
CCDC7-209ENST00000539197 FAAP24Q9BTP7 215 aa1.23□□□□□ -2.21
CCDC7-209ENST00000539197 TSSK6Q9BXA6 273 aa1.23□□□□□ -2.21
CCDC7-209ENST00000539197 BTRCQ9Y297 605 aa1.23□□□□□ -2.21
CCDC7-209ENST00000539197 DOCK10Q96BY6 2186 aa1.23□□□□□ -2.21
CCDC7-209ENST00000539197 TRAV8-2A0A0B4J237 113 aa1.22□□□□□ -2.21
CCDC7-209ENST00000539197 C8orf87E5RJ46 101 aa1.22□□□□□ -2.21
CCDC7-209ENST00000539197 MKRN2OSH3BPM6 223 aa1.22□□□□□ -2.21
CCDC7-209ENST00000539197 TP53I11O14683 189 aa1.22□□□□□ -2.21
CCDC7-209ENST00000539197 TCF21O43680 179 aa1.22□□□□□ -2.21
CCDC7-209ENST00000539197 POP7O75817 140 aaKnown RBP1.22□□□□□ -2.21
CCDC7-209ENST00000539197 EPPINO95925 133 aa1.22□□□□□ -2.21
CCDC7-209ENST00000539197 LIMS3P0CW19 117 aa1.22□□□□□ -2.21
CCDC7-209ENST00000539197 LIMS4P0CW20 117 aa1.22□□□□□ -2.21
CCDC7-209ENST00000539197 CGB3P0DN86 165 aa1.22□□□□□ -2.21
CCDC7-209ENST00000539197 CGB7P0DN87 165 aa1.22□□□□□ -2.21
CCDC7-209ENST00000539197 GTF2F2P13984 249 aa1.22□□□□□ -2.21
CCDC7-209ENST00000539197 PSMD7P51665 324 aa1.22□□□□□ -2.21
CCDC7-209ENST00000539197 DYNLL1P63167 89 aaKnown RBP1.22□□□□□ -2.21
CCDC7-209ENST00000539197 SLAMF1Q13291 335 aa1.22□□□□□ -2.21
CCDC7-209ENST00000539197 SYCP1Q15431 976 aa1.22□□□□□ -2.21
CCDC7-209ENST00000539197 TMEM215Q68D42 235 aa1.22□□□□□ -2.21
CCDC7-209ENST00000539197 LAMTOR1Q6IAA8 161 aa1.22□□□□□ -2.21
CCDC7-209ENST00000539197 FAM183BPQ6ZVS7 135 aa1.22□□□□□ -2.21
CCDC7-209ENST00000539197 FAM19A3Q7Z5A8 133 aa1.22□□□□□ -2.21
CCDC7-209ENST00000539197 OLFM3Q96PB7 478 aa1.22□□□□□ -2.21
CCDC7-209ENST00000539197 NDEL1Q9GZM8 345 aa1.22□□□□□ -2.21
CCDC7-209ENST00000539197 CD300AQ9UGN4 299 aa1.22□□□□□ -2.21
CCDC7-209ENST00000539197 FBXL3Q9UKT7 428 aa1.22□□□□□ -2.21
CCDC7-209ENST00000539197 C14orf166Q9Y224 244 aaKnown RBP1.22□□□□□ -2.21
CCDC7-209ENST00000539197 POMPQ9Y244 141 aa1.22□□□□□ -2.21
CCDC7-209ENST00000539197 TBL2Q9Y4P3 447 aaKnown RBP1.22□□□□□ -2.21
CCDC7-209ENST00000539197 GMEB1Q9Y692 573 aa1.22□□□□□ -2.21
CCDC7-209ENST00000539197 U3KQK5 164 aa1.22□□□□□ -2.21
CCDC7-209ENST00000539197 VWDEQ8N2E2 1590 aa1.21□□□□□ -2.22
CCDC7-209ENST00000539197 IGHV2-26A0A0B4J1V2 119 aa1.21□□□□□ -2.22
CCDC7-209ENST00000539197 FAM183AA6NL82 134 aa1.21□□□□□ -2.22
CCDC7-209ENST00000539197 I3L4J1 428 aa1.21□□□□□ -2.22
CCDC7-209ENST00000539197 J3QLI3 93 aa1.21□□□□□ -2.22
CCDC7-209ENST00000539197 CRXO43186 299 aaPredicted RBP1.21□□□□□ -2.22
CCDC7-209ENST00000539197 GABRA1P14867 456 aa1.21□□□□□ -2.22
CCDC7-209ENST00000539197 ZNF3P17036 446 aa1.21□□□□□ -2.22
CCDC7-209ENST00000539197 PSMB9P28065 219 aa1.21□□□□□ -2.22
CCDC7-209ENST00000539197 PYCR1P32322 319 aa1.21□□□□□ -2.22
CCDC7-209ENST00000539197 ZNF140P52738 457 aaPredicted RBP1.21□□□□□ -2.22
CCDC7-209ENST00000539197 GOLGA7BQ2TAP0 167 aa1.21□□□□□ -2.22
CCDC7-209ENST00000539197 RBM48Q5RL73 367 aaKnown RBP1.21□□□□□ -2.22
CCDC7-209ENST00000539197 TIMM23BQ5SRD1 257 aa1.21□□□□□ -2.22
CCDC7-209ENST00000539197 NOXRED1Q6NXP6 359 aa1.21□□□□□ -2.22
CCDC7-209ENST00000539197 XKRXQ6PP77 449 aa1.21□□□□□ -2.22
CCDC7-209ENST00000539197 CYHR1Q6ZMK1 362 aa1.21□□□□□ -2.22
CCDC7-209ENST00000539197 CLEC20AQ6ZU45 233 aa1.21□□□□□ -2.22
CCDC7-209ENST00000539197 SLC25A45Q8N413 288 aa1.21□□□□□ -2.22
CCDC7-209ENST00000539197 DDIT4LQ96D03 193 aa1.21□□□□□ -2.22
CCDC7-209ENST00000539197 TMEM56Q96MV1 263 aa1.21□□□□□ -2.22
CCDC7-209ENST00000539197 PRSS27Q9BQR3 290 aa1.21□□□□□ -2.22
CCDC7-209ENST00000539197 TXNDC17Q9BRA2 123 aa1.21□□□□□ -2.22
CCDC7-209ENST00000539197 SLC19A3Q9BZV2 496 aa1.21□□□□□ -2.22
CCDC7-209ENST00000539197 OR51E2Q9H255 320 aa1.21□□□□□ -2.22
CCDC7-209ENST00000539197 CHMP4BQ9H444 224 aaKnown RBP1.21□□□□□ -2.22
CCDC7-209ENST00000539197 METTL8Q9H825 291 aaKnown RBP1.21□□□□□ -2.22
CCDC7-209ENST00000539197 TMEM94Q12767 1356 aa1.21□□□□□ -2.22
CCDC7-209ENST00000539197 PIK3R4Q99570 1358 aa1.21□□□□□ -2.22
CCDC7-209ENST00000539197 IGHV1-45A0A0A0MS14 117 aa1.2□□□□□ -2.22
CCDC7-209ENST00000539197 LY6LH3BQJ8 138 aa1.2□□□□□ -2.22
CCDC7-209ENST00000539197 GPR171O14626 319 aa1.2□□□□□ -2.22
CCDC7-209ENST00000539197 FGF16O43320 207 aa1.2□□□□□ -2.22
CCDC7-209ENST00000539197 ADAP1O75689 374 aa1.2□□□□□ -2.22
CCDC7-209ENST00000539197 ASS1P00966 412 aaKnown RBP1.2□□□□□ -2.22
CCDC7-209ENST00000539197 OPN1SWP03999 348 aa1.2□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms