RNA–Protein interactions for RNA: ENST00000538654.5

SNHG1-209, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 2,768 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-209ENST00000538654 NPRL2Q8WTW4 380 aa7.81□□□□□ -1.16
SNHG1-209ENST00000538654 AGMATQ9BSE5 352 aa7.81□□□□□ -1.16
SNHG1-209ENST00000538654 WWTR1Q9GZV5 400 aa7.81□□□□□ -1.16
SNHG1-209ENST00000538654 TMEM222Q9H0R3 208 aa7.81□□□□□ -1.16
SNHG1-209ENST00000538654 LANCL2Q9NS86 450 aa7.81□□□□□ -1.16
SNHG1-209ENST00000538654 LRP4O75096 1905 aa7.8□□□□□ -1.16
SNHG1-209ENST00000538654 ETV2O00321 342 aaPredicted RBP7.8□□□□□ -1.16
SNHG1-209ENST00000538654 MPPED1O15442 326 aa7.8□□□□□ -1.16
SNHG1-209ENST00000538654 IGLV3-1P01715 115 aa7.8□□□□□ -1.16
SNHG1-209ENST00000538654 PFN1P07737 140 aaKnown RBP7.8□□□□□ -1.16
SNHG1-209ENST00000538654 CST2P09228 141 aa7.8□□□□□ -1.16
SNHG1-209ENST00000538654 FOSL2P15408 326 aa7.8□□□□□ -1.16
SNHG1-209ENST00000538654 TNFRSF4P43489 277 aa7.8□□□□□ -1.16
SNHG1-209ENST00000538654 HHEXQ03014 270 aa7.8□□□□□ -1.16
SNHG1-209ENST00000538654 ZFP36L1Q07352 338 aaKnown RBP7.8□□□□□ -1.16
SNHG1-209ENST00000538654 CLN3Q13286 438 aa7.8□□□□□ -1.16
SNHG1-209ENST00000538654 OR8B8Q15620 311 aa7.8□□□□□ -1.16
SNHG1-209ENST00000538654 ZNF787Q6DD87 383 aa7.8□□□□□ -1.16
SNHG1-209ENST00000538654 CRIP3Q6Q6R5 217 aa7.8□□□□□ -1.16
SNHG1-209ENST00000538654 MRGPRGQ86SM5 289 aa7.8□□□□□ -1.16
SNHG1-209ENST00000538654 WDFY1Q8IWB7 410 aa7.8□□□□□ -1.16
SNHG1-209ENST00000538654 YAF2Q8IY57 180 aa7.8□□□□□ -1.16
SNHG1-209ENST00000538654 TMEM123Q8N131 208 aa7.8□□□□□ -1.16
SNHG1-209ENST00000538654 D2HGDHQ8N465 521 aa7.8□□□□□ -1.16
SNHG1-209ENST00000538654 OR2V1Q8NHB1 315 aa7.8□□□□□ -1.16
SNHG1-209ENST00000538654 MBD3L1Q8WWY6 194 aa7.8□□□□□ -1.16
SNHG1-209ENST00000538654 TMEM56Q96MV1 263 aa7.8□□□□□ -1.16
SNHG1-209ENST00000538654 FAAP24Q9BTP7 215 aa7.8□□□□□ -1.16
SNHG1-209ENST00000538654 EMC6Q9BV81 110 aa7.8□□□□□ -1.16
SNHG1-209ENST00000538654 TPSD1Q9BZJ3 242 aa7.8□□□□□ -1.16
SNHG1-209ENST00000538654 Q9N2K0 584 aa7.8□□□□□ -1.16
SNHG1-209ENST00000538654 PNRC2Q9NPJ4 139 aaKnown RBP7.8□□□□□ -1.16
SNHG1-209ENST00000538654 GPR173Q9NS66 373 aa7.8□□□□□ -1.16
SNHG1-209ENST00000538654 ONECUT1Q9UBC0 465 aa7.8□□□□□ -1.16
SNHG1-209ENST00000538654 UBE2J1Q9Y385 318 aaPredicted RBP7.8□□□□□ -1.16
SNHG1-209ENST00000538654 RFNGQ9Y644 331 aa7.8□□□□□ -1.16
SNHG1-209ENST00000538654 TMEM56-RWDD3S4R434 201 aa7.8□□□□□ -1.16
SNHG1-209ENST00000538654 PTPRSQ13332 1948 aa7.8□□□□□ -1.16
SNHG1-209ENST00000538654 PCNX3Q9H6A9 2034 aa7.8□□□□□ -1.16
SNHG1-209ENST00000538654 TNFSF12-TNFSF13A0A0A6YY99 330 aa7.8□□□□□ -1.16
SNHG1-209ENST00000538654 CLEC18AA5D8T8 446 aa7.8□□□□□ -1.16
SNHG1-209ENST00000538654 VSTM2BA6NLU5 285 aa7.8□□□□□ -1.16
SNHG1-209ENST00000538654 ZFP92A6NM28 416 aa7.8□□□□□ -1.16
SNHG1-209ENST00000538654 K7EQM0 130 aa7.8□□□□□ -1.16
SNHG1-209ENST00000538654 SLC33A1O00400 549 aaPredicted RBP7.8□□□□□ -1.16
SNHG1-209ENST00000538654 HS3ST1O14792 307 aa7.8□□□□□ -1.16
SNHG1-209ENST00000538654 FGF5P12034 268 aa7.8□□□□□ -1.16
SNHG1-209ENST00000538654 IDH3GP51553 393 aaPredicted RBP7.8□□□□□ -1.16
SNHG1-209ENST00000538654 NCR3LG1Q68D85 454 aa7.8□□□□□ -1.16
SNHG1-209ENST00000538654 CPEB2Q7Z5Q1 589 aaKnown RBP7.8□□□□□ -1.16
SNHG1-209ENST00000538654 CLEC18CQ8NCF0 446 aa7.8□□□□□ -1.16
SNHG1-209ENST00000538654 TP53RKQ96S44 253 aa7.8□□□□□ -1.16
SNHG1-209ENST00000538654 YAE1D1Q9NRH1 226 aa7.8□□□□□ -1.16
SNHG1-209ENST00000538654 LAMP3Q9UQV4 416 aa7.8□□□□□ -1.16
SNHG1-209ENST00000538654 COLQQ9Y215 455 aaPredicted RBP7.8□□□□□ -1.16
SNHG1-209ENST00000538654 A0A0C4DFX4 3053 aa7.8□□□□□ -1.16
SNHG1-209ENST00000538654 KIR2DL5BA0A0G2JN68 375 aa7.79□□□□□ -1.16
SNHG1-209ENST00000538654 KIR2DL5BA0A0G2JPC4 375 aa7.79□□□□□ -1.16
SNHG1-209ENST00000538654 RER1O15258 196 aa7.79□□□□□ -1.16
SNHG1-209ENST00000538654 CST7O76096 145 aa7.79□□□□□ -1.16
SNHG1-209ENST00000538654 CTSEP14091 401 aa7.79□□□□□ -1.16
SNHG1-209ENST00000538654 NTSR1P30989 418 aa7.79□□□□□ -1.16
SNHG1-209ENST00000538654 OPRM1P35372 400 aa7.79□□□□□ -1.16
SNHG1-209ENST00000538654 RRADP55042 308 aa7.79□□□□□ -1.16
SNHG1-209ENST00000538654 RUNX1Q01196 453 aa7.79□□□□□ -1.16
SNHG1-209ENST00000538654 PRDX4Q13162 271 aa7.79□□□□□ -1.16
SNHG1-209ENST00000538654 HERPUD1Q15011 391 aa7.79□□□□□ -1.16
SNHG1-209ENST00000538654 TMEM241Q24JQ0 296 aa7.79□□□□□ -1.16
SNHG1-209ENST00000538654 SLC25A47Q6Q0C1 308 aa7.79□□□□□ -1.16
SNHG1-209ENST00000538654 BTNL3Q6UXE8 466 aa7.79□□□□□ -1.16
SNHG1-209ENST00000538654 KIR2DL5AQ8N109 375 aa7.79□□□□□ -1.16
SNHG1-209ENST00000538654 ADPRHL1Q8NDY3 354 aa7.79□□□□□ -1.16
SNHG1-209ENST00000538654 SCGB1C1Q8TD33 95 aa7.79□□□□□ -1.16
SNHG1-209ENST00000538654 SPSB1Q96BD6 273 aa7.79□□□□□ -1.16
SNHG1-209ENST00000538654 BTF3L4Q96K17 158 aa7.79□□□□□ -1.16
SNHG1-209ENST00000538654 TMEM208Q9BTX3 173 aa7.79□□□□□ -1.16
SNHG1-209ENST00000538654 OR51B6Q9H340 312 aa7.79□□□□□ -1.16
SNHG1-209ENST00000538654 ZNF160Q9HCG1 818 aa7.79□□□□□ -1.16
SNHG1-209ENST00000538654 DKK4Q9UBT3 224 aa7.79□□□□□ -1.16
SNHG1-209ENST00000538654 IGKV3D-11A0A0A0MRZ8 115 aa7.79□□□□□ -1.16
SNHG1-209ENST00000538654 H7BYZ3 331 aa7.79□□□□□ -1.16
SNHG1-209ENST00000538654 KLF8O95600 359 aaPredicted RBP7.79□□□□□ -1.16
SNHG1-209ENST00000538654 GLI4P10075 376 aa7.79□□□□□ -1.16
SNHG1-209ENST00000538654 OR10J1P30954 320 aa7.79□□□□□ -1.16
SNHG1-209ENST00000538654 GALR1P47211 349 aa7.79□□□□□ -1.16
SNHG1-209ENST00000538654 ID3Q02535 119 aa7.79□□□□□ -1.16
SNHG1-209ENST00000538654 MPV17LQ2QL34 196 aa7.79□□□□□ -1.16
SNHG1-209ENST00000538654 Q6ZSR3 168 aa7.79□□□□□ -1.16
SNHG1-209ENST00000538654 CYP2G1PQ6ZSU1 146 aa7.79□□□□□ -1.16
SNHG1-209ENST00000538654 WFDC3Q8IUB2 231 aa7.79□□□□□ -1.16
SNHG1-209ENST00000538654 TMEM217Q8N7C4 229 aa7.79□□□□□ -1.16
SNHG1-209ENST00000538654 OR11L1Q8NGX0 322 aa7.79□□□□□ -1.16
SNHG1-209ENST00000538654 FKBP11Q9NYL4 201 aa7.79□□□□□ -1.16
SNHG1-209ENST00000538654 PRSS50Q9UI38 385 aa7.79□□□□□ -1.16
SNHG1-209ENST00000538654 OR4A8P0C604 315 aa7.78□□□□□ -1.16
SNHG1-209ENST00000538654 KIR2DL1P43626 348 aaPredicted RBP7.78□□□□□ -1.16
SNHG1-209ENST00000538654 OR3A1P47881 315 aa7.78□□□□□ -1.16
SNHG1-209ENST00000538654 ATP5J2P56134 94 aa7.78□□□□□ -1.16
SNHG1-209ENST00000538654 EXT1Q16394 746 aa7.78□□□□□ -1.16
SNHG1-209ENST00000538654 C16orf82Q7Z2V1 217 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms