RNA–Protein interactions for RNA: ENST00000538176.5

CCDC78-215, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,166 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-215ENST00000538176 GABPB1Q06547 395 aaPredicted RBP17.2■□□□□ 0.34
CCDC78-215ENST00000538176 TMEM30BQ3MIR4 351 aa17.2■□□□□ 0.34
CCDC78-215ENST00000538176 ACSM3Q53FZ2 586 aa17.2■□□□□ 0.34
CCDC78-215ENST00000538176 RFESDQ8TAC1 157 aa17.2■□□□□ 0.34
CCDC78-215ENST00000538176 PHYHIPQ92561 330 aa17.2■□□□□ 0.34
CCDC78-215ENST00000538176 TOMM40LQ969M1 308 aa17.2■□□□□ 0.34
CCDC78-215ENST00000538176 WNT10AQ9GZT5 417 aa17.2■□□□□ 0.34
CCDC78-215ENST00000538176 CST11Q9H112 138 aa17.2■□□□□ 0.34
CCDC78-215ENST00000538176 RCC2Q9P258 522 aaKnown RBP17.2■□□□□ 0.34
CCDC78-215ENST00000538176 MAGEA13PA6NCF6 341 aa17.19■□□□□ 0.34
CCDC78-215ENST00000538176 PIN1P1O15428 100 aa17.19■□□□□ 0.34
CCDC78-215ENST00000538176 FBXO24O75426 580 aa17.19■□□□□ 0.34
CCDC78-215ENST00000538176 MT-ND4P03905 459 aa17.19■□□□□ 0.34
CCDC78-215ENST00000538176 VDAC2P45880 294 aaPredicted RBP17.19■□□□□ 0.34
CCDC78-215ENST00000538176 GLT8D1Q68CQ7 371 aa17.19■□□□□ 0.34
CCDC78-215ENST00000538176 TRAT1Q6PIZ9 186 aa17.19■□□□□ 0.34
CCDC78-215ENST00000538176 ZNF497Q6ZNH5 498 aa17.19■□□□□ 0.34
CCDC78-215ENST00000538176 LYPD6Q86Y78 171 aa17.19■□□□□ 0.34
CCDC78-215ENST00000538176 OR8H3Q8N146 312 aa17.19■□□□□ 0.34
CCDC78-215ENST00000538176 C8orf31Q8N9H6 132 aa17.19■□□□□ 0.34
CCDC78-215ENST00000538176 ARL11Q969Q4 196 aa17.19■□□□□ 0.34
CCDC78-215ENST00000538176 SLC25A33Q9BSK2 321 aa17.19■□□□□ 0.34
CCDC78-215ENST00000538176 A0A1W2PP11 408 aa17.18■□□□□ 0.34
CCDC78-215ENST00000538176 AIPO00170 330 aa17.18■□□□□ 0.34
CCDC78-215ENST00000538176 MGMTP16455 207 aa17.18■□□□□ 0.34
CCDC78-215ENST00000538176 JUNBP17275 347 aaPredicted RBP17.18■□□□□ 0.34
CCDC78-215ENST00000538176 FUT3P21217 361 aa17.18■□□□□ 0.34
CCDC78-215ENST00000538176 MYF6P23409 242 aa17.18■□□□□ 0.34
CCDC78-215ENST00000538176 SSTR5P35346 364 aa17.18■□□□□ 0.34
CCDC78-215ENST00000538176 RANBP1P43487 201 aa17.18■□□□□ 0.34
CCDC78-215ENST00000538176 HSPA13P48723 471 aa17.18■□□□□ 0.34
CCDC78-215ENST00000538176 AQP4P55087 323 aa17.18■□□□□ 0.34
CCDC78-215ENST00000538176 SLC35A2P78381 396 aa17.18■□□□□ 0.34
CCDC78-215ENST00000538176 MED22Q15528 200 aa17.18■□□□□ 0.34
CCDC78-215ENST00000538176 OR10X1Q8NGY0 326 aa17.18■□□□□ 0.34
CCDC78-215ENST00000538176 FAM90A9PA6NNJ1 464 aa17.17■□□□□ 0.34
CCDC78-215ENST00000538176 CRTAPO75718 401 aaPredicted RBP17.17■□□□□ 0.34
CCDC78-215ENST00000538176 TSPAN15O95858 294 aa17.17■□□□□ 0.34
CCDC78-215ENST00000538176 DEFA6Q01524 100 aa17.17■□□□□ 0.34
CCDC78-215ENST00000538176 HABP2Q14520 560 aaPredicted RBP17.17■□□□□ 0.34
CCDC78-215ENST00000538176 TRAM1Q15629 374 aa17.17■□□□□ 0.34
CCDC78-215ENST00000538176 C6orf183Q5T699 404 aa17.17■□□□□ 0.34
CCDC78-215ENST00000538176 RAB12Q6IQ22 244 aa17.17■□□□□ 0.34
CCDC78-215ENST00000538176 NDUFA11Q86Y39 141 aa17.17■□□□□ 0.34
CCDC78-215ENST00000538176 LINC00311Q8N616 119 aa17.17■□□□□ 0.34
CCDC78-215ENST00000538176 FAM110DQ8TAY7 271 aaPredicted RBP17.17■□□□□ 0.34
CCDC78-215ENST00000538176 NRG4Q8WWG1 115 aa17.17■□□□□ 0.34
CCDC78-215ENST00000538176 OCSTAMPQ9BR26 566 aa17.17■□□□□ 0.34
CCDC78-215ENST00000538176 ANKRD60Q9BZ19 345 aa17.17■□□□□ 0.34
CCDC78-215ENST00000538176 SELENOIQ9C0D9 397 aa17.17■□□□□ 0.34
CCDC78-215ENST00000538176 DUSP21Q9H596 190 aa17.17■□□□□ 0.34
CCDC78-215ENST00000538176 ISYNA1Q9NPH2 558 aa17.17■□□□□ 0.34
CCDC78-215ENST00000538176 ETAA1Q9NY74 926 aa17.17■□□□□ 0.34
CCDC78-215ENST00000538176 TRAPPC2LQ9UL33 140 aa17.17■□□□□ 0.34
CCDC78-215ENST00000538176 PEX16Q9Y5Y5 336 aa17.17■□□□□ 0.34
CCDC78-215ENST00000538176 C15orf65H3BRN8 121 aa17.16■□□□□ 0.34
CCDC78-215ENST00000538176 SPINT2O43291 252 aa17.16■□□□□ 0.34
CCDC78-215ENST00000538176 SRMP19623 302 aa17.16■□□□□ 0.34
CCDC78-215ENST00000538176 LTC4SQ16873 150 aa17.16■□□□□ 0.34
CCDC78-215ENST00000538176 ZNF554Q86TJ5 538 aa17.16■□□□□ 0.34
CCDC78-215ENST00000538176 GAPTQ8N292 157 aa17.16■□□□□ 0.34
CCDC78-215ENST00000538176 WIPF2Q8TF74 440 aaPredicted RBP17.16■□□□□ 0.34
CCDC78-215ENST00000538176 UFD1Q92890 307 aa17.16■□□□□ 0.34
CCDC78-215ENST00000538176 LSM2Q9Y333 95 aaKnown RBP17.16■□□□□ 0.34
CCDC78-215ENST00000538176 SDCBPO00560 298 aaPredicted RBP17.15■□□□□ 0.34
CCDC78-215ENST00000538176 RGS10O43665 173 aa17.15■□□□□ 0.34
CCDC78-215ENST00000538176 SC5DO75845 299 aa17.15■□□□□ 0.34
CCDC78-215ENST00000538176 OPN1MWP04001 364 aa17.15■□□□□ 0.34
CCDC78-215ENST00000538176 GAPDHP04406 335 aaKnown RBP17.15■□□□□ 0.34
CCDC78-215ENST00000538176 LPLP06858 475 aa17.15■□□□□ 0.34
CCDC78-215ENST00000538176 OPN1MW2P0DN77 364 aa17.15■□□□□ 0.34
CCDC78-215ENST00000538176 OPN1MW3P0DN78 364 aa17.15■□□□□ 0.34
CCDC78-215ENST00000538176 CD24P25063 80 aa17.15■□□□□ 0.34
CCDC78-215ENST00000538176 PSMA1P25786 263 aaKnown RBP17.15■□□□□ 0.34
CCDC78-215ENST00000538176 IL3RAP26951 378 aa17.15■□□□□ 0.34
CCDC78-215ENST00000538176 IRF3Q14653 427 aa17.15■□□□□ 0.34
CCDC78-215ENST00000538176 SYT6Q5T7P8 510 aaPredicted RBP17.15■□□□□ 0.34
CCDC78-215ENST00000538176 STEAP3Q658P3 488 aa17.15■□□□□ 0.34
CCDC78-215ENST00000538176 CENPVQ7Z7K6 275 aaPredicted RBP17.15■□□□□ 0.34
CCDC78-215ENST00000538176 C11orf44Q8N8P7 122 aa17.15■□□□□ 0.34
CCDC78-215ENST00000538176 Q96M66 194 aa17.15■□□□□ 0.34
CCDC78-215ENST00000538176 OR5M11Q96RB7 305 aa17.15■□□□□ 0.34
CCDC78-215ENST00000538176 TMED9Q9BVK6 235 aa17.15■□□□□ 0.34
CCDC78-215ENST00000538176 GFOD1Q9NXC2 390 aa17.15■□□□□ 0.34
CCDC78-215ENST00000538176 ZNF581Q9P0T4 197 aa17.15■□□□□ 0.34
CCDC78-215ENST00000538176 LRRC42Q9Y546 428 aa17.15■□□□□ 0.34
CCDC78-215ENST00000538176 MEGF8Q7Z7M0 2845 aa17.14■□□□□ 0.33
CCDC78-215ENST00000538176 WIPF1O43516 503 aa17.14■□□□□ 0.33
CCDC78-215ENST00000538176 GNG10P50151 68 aa17.14■□□□□ 0.33
CCDC78-215ENST00000538176 ZNF816Q0VGE8 651 aaPredicted RBP17.14■□□□□ 0.33
CCDC78-215ENST00000538176 ABCA11PQ4W5N1 156 aa17.14■□□□□ 0.33
CCDC78-215ENST00000538176 HSD17B12Q53GQ0 312 aa17.14■□□□□ 0.33
CCDC78-215ENST00000538176 C1orf100Q5SVJ3 147 aa17.14■□□□□ 0.33
CCDC78-215ENST00000538176 CEACAM19Q7Z692 300 aa17.14■□□□□ 0.33
CCDC78-215ENST00000538176 OR4F17Q8NGA8 305 aa17.14■□□□□ 0.33
CCDC78-215ENST00000538176 CCDC107Q8WV48 283 aa17.14■□□□□ 0.33
CCDC78-215ENST00000538176 LEAP2Q969E1 77 aa17.14■□□□□ 0.33
CCDC78-215ENST00000538176 OR4F4Q96R69 305 aa17.14■□□□□ 0.33
CCDC78-215ENST00000538176 BANF2Q9H503 90 aa17.14■□□□□ 0.33
CCDC78-215ENST00000538176 MOB4Q9Y3A3 225 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms