RNA–Protein interactions for RNA: ENST00000538136.1

MSH6-209, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 4,055 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-209ENST00000538136 WDR25Q64LD2 544 aaPredicted RBP6.05□□□□□ -1.44
MSH6-209ENST00000538136 OR2W3Q7Z3T1 314 aa6.05□□□□□ -1.44
MSH6-209ENST00000538136 TGIF2LXQ8IUE1 241 aa6.05□□□□□ -1.44
MSH6-209ENST00000538136 C18orf12Q96KH6 178 aa6.05□□□□□ -1.44
MSH6-209ENST00000538136 RIMS4Q9H426 269 aaPredicted RBP6.05□□□□□ -1.44
MSH6-209ENST00000538136 UNKLQ9H9P5 680 aaKnown RBP6.05□□□□□ -1.44
MSH6-209ENST00000538136 MIOXQ9UGB7 285 aa6.05□□□□□ -1.44
MSH6-209ENST00000538136 SCP2D1Q9UJQ7 156 aa6.05□□□□□ -1.44
MSH6-209ENST00000538136 GMEB1Q9Y692 573 aa6.05□□□□□ -1.44
MSH6-209ENST00000538136 A0A0U1RQV5 110 aa6.05□□□□□ -1.44
MSH6-209ENST00000538136 IGHMP01871 453 aa6.05□□□□□ -1.44
MSH6-209ENST00000538136 ZNF728P0DKX0 622 aa6.05□□□□□ -1.44
MSH6-209ENST00000538136 SNCAP37840 140 aa6.05□□□□□ -1.44
MSH6-209ENST00000538136 PMELP40967 661 aa6.05□□□□□ -1.44
MSH6-209ENST00000538136 GZMKP49863 264 aa6.05□□□□□ -1.44
MSH6-209ENST00000538136 CCR9P51686 369 aa6.05□□□□□ -1.44
MSH6-209ENST00000538136 OR51S1Q8NGJ8 323 aa6.05□□□□□ -1.44
MSH6-209ENST00000538136 OR10R2Q8NGX6 335 aa6.05□□□□□ -1.44
MSH6-209ENST00000538136 NANPQ8TBE9 248 aa6.05□□□□□ -1.44
MSH6-209ENST00000538136 SPACA1Q9HBV2 294 aa6.05□□□□□ -1.44
MSH6-209ENST00000538136 KIAA1456Q9P272 454 aa6.05□□□□□ -1.44
MSH6-209ENST00000538136 CD8AP01732 235 aa6.04□□□□□ -1.44
MSH6-209ENST00000538136 HBZP02008 142 aa6.04□□□□□ -1.44
MSH6-209ENST00000538136 PF4V1P10720 104 aa6.04□□□□□ -1.44
MSH6-209ENST00000538136 CRYBB2P43320 205 aa6.04□□□□□ -1.44
MSH6-209ENST00000538136 TAS2R20P59543 309 aa6.04□□□□□ -1.44
MSH6-209ENST00000538136 ERVK-16P61578 105 aa6.04□□□□□ -1.44
MSH6-209ENST00000538136 GNMTQ14749 295 aa6.04□□□□□ -1.44
MSH6-209ENST00000538136 LHFPL4Q7Z7J7 247 aa6.04□□□□□ -1.44
MSH6-209ENST00000538136 ZNF695Q8IW36 515 aa6.04□□□□□ -1.44
MSH6-209ENST00000538136 C3orf56Q8N813 242 aa6.04□□□□□ -1.44
MSH6-209ENST00000538136 MMP28Q9H239 520 aa6.04□□□□□ -1.44
MSH6-209ENST00000538136 PARP11Q9NR21 331 aa6.04□□□□□ -1.44
MSH6-209ENST00000538136 PLCXD1Q9NUJ7 323 aa6.04□□□□□ -1.44
MSH6-209ENST00000538136 OR1A1Q9P1Q5 309 aa6.04□□□□□ -1.44
MSH6-209ENST00000538136 NACAE9PAV3 2078 aa6.04□□□□□ -1.44
MSH6-209ENST00000538136 TNRC6BQ9UPQ9 1833 aaKnown RBP6.04□□□□□ -1.44
MSH6-209ENST00000538136 CEBPZOSA8MTT3 80 aa6.04□□□□□ -1.44
MSH6-209ENST00000538136 IQCF6A8MYZ5 107 aa6.04□□□□□ -1.44
MSH6-209ENST00000538136 H3BUX3 64 aa6.04□□□□□ -1.44
MSH6-209ENST00000538136 ETV2O00321 342 aaPredicted RBP6.04□□□□□ -1.44
MSH6-209ENST00000538136 CCSO14618 274 aa6.04□□□□□ -1.44
MSH6-209ENST00000538136 SNAPC5O75971 98 aa6.04□□□□□ -1.44
MSH6-209ENST00000538136 IGHV3-11P01762 117 aa6.04□□□□□ -1.44
MSH6-209ENST00000538136 MSMBP08118 114 aa6.04□□□□□ -1.44
MSH6-209ENST00000538136 RRASP10301 218 aa6.04□□□□□ -1.44
MSH6-209ENST00000538136 GDNFP39905 211 aa6.04□□□□□ -1.44
MSH6-209ENST00000538136 SRSF4Q08170 494 aaKnown RBP6.04□□□□□ -1.44
MSH6-209ENST00000538136 ACP7Q6ZNF0 438 aa6.04□□□□□ -1.44
MSH6-209ENST00000538136 LCNL1Q6ZST4 164 aa6.04□□□□□ -1.44
MSH6-209ENST00000538136 OR5T1Q8NG75 326 aa6.04□□□□□ -1.44
MSH6-209ENST00000538136 THAP7Q9BT49 309 aaPredicted RBP6.04□□□□□ -1.44
MSH6-209ENST00000538136 TRAF4Q9BUZ4 470 aaPredicted RBP6.04□□□□□ -1.44
MSH6-209ENST00000538136 MAGT1Q9H0U3 335 aa6.04□□□□□ -1.44
MSH6-209ENST00000538136 OR51I2Q9H344 312 aa6.04□□□□□ -1.44
MSH6-209ENST00000538136 GAL3ST2Q9H3Q3 398 aa6.04□□□□□ -1.44
MSH6-209ENST00000538136 NUDT15Q9NV35 164 aa6.04□□□□□ -1.44
MSH6-209ENST00000538136 NDUFB11Q9NX14 153 aa6.04□□□□□ -1.44
MSH6-209ENST00000538136 NDUFA13Q9P0J0 144 aa6.04□□□□□ -1.44
MSH6-209ENST00000538136 ARPC1BO15143 372 aaKnown RBP6.04□□□□□ -1.44
MSH6-209ENST00000538136 BDH1Q02338 343 aa6.04□□□□□ -1.44
MSH6-209ENST00000538136 HABP2Q14520 560 aaPredicted RBP6.04□□□□□ -1.44
MSH6-209ENST00000538136 CDK10Q15131 360 aa6.04□□□□□ -1.44
MSH6-209ENST00000538136 HIST3H3Q16695 136 aa6.04□□□□□ -1.44
MSH6-209ENST00000538136 RPL39P5Q59GN2 51 aa6.04□□□□□ -1.44
MSH6-209ENST00000538136 CYB5R2Q6BCY4 276 aa6.04□□□□□ -1.44
MSH6-209ENST00000538136 CENPVQ7Z7K6 275 aaPredicted RBP6.04□□□□□ -1.44
MSH6-209ENST00000538136 MARCH1Q8TCQ1 289 aa6.04□□□□□ -1.44
MSH6-209ENST00000538136 C20orf24Q9BUV8 137 aa6.04□□□□□ -1.44
MSH6-209ENST00000538136 FLVCR2Q9UPI3 526 aa6.04□□□□□ -1.44
MSH6-209ENST00000538136 SULT1C2O00338 296 aa6.04□□□□□ -1.44
MSH6-209ENST00000538136 COX5BP10606 129 aa6.04□□□□□ -1.44
MSH6-209ENST00000538136 MZT2BQ6NZ67 158 aa6.04□□□□□ -1.44
MSH6-209ENST00000538136 RNF138Q8WVD3 245 aa6.04□□□□□ -1.44
MSH6-209ENST00000538136 SDSLQ96GA7 329 aa6.04□□□□□ -1.44
MSH6-209ENST00000538136 PGLYRP3Q96LB9 341 aa6.04□□□□□ -1.44
MSH6-209ENST00000538136 RDH8Q9NYR8 311 aa6.04□□□□□ -1.44
MSH6-209ENST00000538136 KCNIP3Q9Y2W7 256 aa6.04□□□□□ -1.44
MSH6-209ENST00000538136 LSM5Q9Y4Y9 91 aaKnown RBP6.04□□□□□ -1.44
MSH6-209ENST00000538136 ARHGAP21Q5T5U3 1957 aa6.03□□□□□ -1.44
MSH6-209ENST00000538136 COL5A1P20908 1838 aaPredicted RBP6.03□□□□□ -1.44
MSH6-209ENST00000538136 DISC1C4P0D8 188 aa6.03□□□□□ -1.44
MSH6-209ENST00000538136 MGST3O14880 152 aa6.03□□□□□ -1.44
MSH6-209ENST00000538136 GPR37O15354 613 aa6.03□□□□□ -1.44
MSH6-209ENST00000538136 APOA2P02652 100 aa6.03□□□□□ -1.44
MSH6-209ENST00000538136 IFNA4P05014 189 aa6.03□□□□□ -1.44
MSH6-209ENST00000538136 GLAP06280 429 aa6.03□□□□□ -1.44
MSH6-209ENST00000538136 SMIM18P0DKX4 95 aa6.03□□□□□ -1.44
MSH6-209ENST00000538136 CAV2P51636 162 aa6.03□□□□□ -1.44
MSH6-209ENST00000538136 TEX30Q5JUR7 227 aa6.03□□□□□ -1.44
MSH6-209ENST00000538136 OR5D13Q8NGL4 314 aa6.03□□□□□ -1.44
MSH6-209ENST00000538136 DDOQ99489 341 aa6.03□□□□□ -1.44
MSH6-209ENST00000538136 CALYQ9NYX4 217 aa6.03□□□□□ -1.44
MSH6-209ENST00000538136 OR6C3Q9NZP0 311 aa6.03□□□□□ -1.44
MSH6-209ENST00000538136 NPIPB13A6NJU9 1138 aa6.03□□□□□ -1.44
MSH6-209ENST00000538136 CYSRT1A8MQ03 144 aa6.03□□□□□ -1.44
MSH6-209ENST00000538136 NPIPB4C9JG80 1138 aa6.03□□□□□ -1.44
MSH6-209ENST00000538136 OGG1O15527 345 aa6.03□□□□□ -1.44
MSH6-209ENST00000538136 REG1AP05451 166 aa6.03□□□□□ -1.44
MSH6-209ENST00000538136 HTR1DP28221 377 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms